RNA–Protein interactions for RNA: ENST00000544868.2

MALAT1-203, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 3 BASIC

Gene MALAT1, Length 480 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-203ENST00000544868 CDC42BPBQ9Y5S2 1711 aa13.84□□□□□ -0.19
MALAT1-203ENST00000544868 SAMD9LQ8IVG5 1584 aa13.83□□□□□ -0.19
MALAT1-203ENST00000544868 PROSER2Q86WR7 435 aaPredicted RBP13.83□□□□□ -0.2
MALAT1-203ENST00000544868 ABCC3O15438 1527 aa13.82□□□□□ -0.2
MALAT1-203ENST00000544868 PRDM15P57071 1507 aaPredicted RBP13.82□□□□□ -0.2
MALAT1-203ENST00000544868 ADGBQ8N7X0 1667 aa13.82□□□□□ -0.2
MALAT1-203ENST00000544868 SF3B2Q13435 895 aaKnown RBP13.8□□□□□ -0.2
MALAT1-203ENST00000544868 KDM5AP29375 1690 aaKnown RBP13.79□□□□□ -0.2
MALAT1-203ENST00000544868 TRPC5Q9UL62 973 aaPredicted RBP13.78□□□□□ -0.2
MALAT1-203ENST00000544868 KCNA6P17658 529 aa13.77□□□□□ -0.21
MALAT1-203ENST00000544868 NKTRP30414 1462 aaKnown RBP13.77□□□□□ -0.21
MALAT1-203ENST00000544868 SPAG9O60271 1321 aaKnown RBP13.76□□□□□ -0.21
MALAT1-203ENST00000544868 PREX2Q70Z35 1606 aa13.75□□□□□ -0.21
MALAT1-203ENST00000544868 LTKP29376 864 aa13.75□□□□□ -0.21
MALAT1-203ENST00000544868 SSUH2Q9Y2M2 353 aa13.75□□□□□ -0.21
MALAT1-203ENST00000544868 USP21Q9UK80 565 aa13.74□□□□□ -0.21
MALAT1-203ENST00000544868 R3HDM1Q15032 1099 aaKnown RBP13.73□□□□□ -0.21
MALAT1-203ENST00000544868 TXNDC2Q86VQ3 553 aa13.73□□□□□ -0.21
MALAT1-203ENST00000544868 INO80Q9ULG1 1556 aaPredicted RBP13.73□□□□□ -0.21
MALAT1-203ENST00000544868 NCOA2Q15596 1464 aa13.73□□□□□ -0.21
MALAT1-203ENST00000544868 UBR1Q8IWV7 1749 aa13.73□□□□□ -0.21
MALAT1-203ENST00000544868 RTEL1-TNFRSF6BF6WH68 1400 aa13.73□□□□□ -0.21
MALAT1-203ENST00000544868 ATRNO75882 1429 aa13.73□□□□□ -0.21
MALAT1-203ENST00000544868 UNC13BO14795 1591 aa13.72□□□□□ -0.21
MALAT1-203ENST00000544868 AKT1S1Q96B36 256 aa13.71□□□□□ -0.21
MALAT1-203ENST00000544868 ARHGAP23Q9P227 1491 aa13.71□□□□□ -0.21
MALAT1-203ENST00000544868 CAMTA1Q9Y6Y1 1673 aa13.71□□□□□ -0.21
MALAT1-203ENST00000544868 SETD5Q9C0A6 1442 aa13.71□□□□□ -0.22
MALAT1-203ENST00000544868 SLIT1O75093 1534 aa13.7□□□□□ -0.22
MALAT1-203ENST00000544868 PRXQ9BXM0 1461 aa13.7□□□□□ -0.22
MALAT1-203ENST00000544868 ADAMTS2O95450 1211 aa13.69□□□□□ -0.22
MALAT1-203ENST00000544868 UTRNP46939 3433 aa13.69□□□□□ -0.22
MALAT1-203ENST00000544868 GIGYF1O75420 1035 aaPredicted RBP13.68□□□□□ -0.22
MALAT1-203ENST00000544868 SYCP2Q9BX26 1530 aa13.68□□□□□ -0.22
MALAT1-203ENST00000544868 MAST1Q9Y2H9 1570 aa13.67□□□□□ -0.22
MALAT1-203ENST00000544868 TROQ12816 1431 aaPredicted RBP13.67□□□□□ -0.22
MALAT1-203ENST00000544868 CLIP1P30622 1438 aa13.66□□□□□ -0.22
MALAT1-203ENST00000544868 CDK11AQ9UQ88 783 aaPredicted RBP13.66□□□□□ -0.22
MALAT1-203ENST00000544868 EID1Q9Y6B2 187 aa13.66□□□□□ -0.22
MALAT1-203ENST00000544868 NINLQ9Y2I6 1382 aa13.66□□□□□ -0.22
MALAT1-203ENST00000544868 BAG6P46379 1132 aa13.65□□□□□ -0.22
MALAT1-203ENST00000544868 PNPLA6Q8IY17 1366 aa13.65□□□□□ -0.22
MALAT1-203ENST00000544868 WASHC2CQ9Y4E1 1318 aa13.64□□□□□ -0.23
MALAT1-203ENST00000544868 SPHKAPQ2M3C7 1700 aa13.64□□□□□ -0.23
MALAT1-203ENST00000544868 BRINP3Q76B58 766 aa13.63□□□□□ -0.23
MALAT1-203ENST00000544868 FNBP4Q8N3X1 1017 aaPredicted RBP13.63□□□□□ -0.23
MALAT1-203ENST00000544868 LRRC59Q96AG4 307 aaKnown RBP13.63□□□□□ -0.23
MALAT1-203ENST00000544868 PPP1R1BQ9UD71 204 aaPredicted RBP13.63□□□□□ -0.23
MALAT1-203ENST00000544868 CHD4Q14839 1912 aa13.62□□□□□ -0.23
MALAT1-203ENST00000544868 SUPT5HO00267 1087 aaKnown RBP13.62□□□□□ -0.23
MALAT1-203ENST00000544868 RANGAP1P46060 587 aaPredicted RBP13.62□□□□□ -0.23
MALAT1-203ENST00000544868 PROM2Q8N271 834 aa13.62□□□□□ -0.23
MALAT1-203ENST00000544868 SLC26A8Q96RN1 970 aa13.61□□□□□ -0.23
MALAT1-203ENST00000544868 BRWD3Q6RI45 1802 aa13.61□□□□□ -0.23
MALAT1-203ENST00000544868 PRELPP51888 382 aa13.6□□□□□ -0.23
MALAT1-203ENST00000544868 CADPS2Q86UW7 1296 aa13.6□□□□□ -0.23
MALAT1-203ENST00000544868 MROH1Q8NDA8 1641 aa13.6□□□□□ -0.23
MALAT1-203ENST00000544868 GPATCH8Q9UKJ3 1502 aaKnown RBP13.59□□□□□ -0.23
MALAT1-203ENST00000544868 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.59□□□□□ -0.23
MALAT1-203ENST00000544868 ERVK-7P63135 1459 aa13.59□□□□□ -0.23
MALAT1-203ENST00000544868 ASXL1Q8IXJ9 1541 aa13.59□□□□□ -0.23
MALAT1-203ENST00000544868 CDC42BPAQ5VT25 1732 aa13.59□□□□□ -0.23
MALAT1-203ENST00000544868 HNRNPMP52272 730 aaKnown RBP eCLIP13.58□□□□□ -0.24
MALAT1-203ENST00000544868 C14orf37Q86TY3 774 aa13.58□□□□□ -0.24
MALAT1-203ENST00000544868 GJD4Q96KN9 370 aaPredicted RBP13.58□□□□□ -0.24
MALAT1-203ENST00000544868 ZNF777Q9ULD5 760 aaPredicted RBP13.58□□□□□ -0.24
MALAT1-203ENST00000544868 CAMSAP2Q08AD1 1489 aa13.58□□□□□ -0.24
MALAT1-203ENST00000544868 RALGAPBQ86X10 1494 aa13.58□□□□□ -0.24
MALAT1-203ENST00000544868 TET3O43151 1660 aa13.57□□□□□ -0.24
MALAT1-203ENST00000544868 ATF3P18847 181 aa13.57□□□□□ -0.24
MALAT1-203ENST00000544868 CHRDL2Q6WN34 429 aa13.57□□□□□ -0.24
MALAT1-203ENST00000544868 NCOA3Q9Y6Q9 1424 aa13.56□□□□□ -0.24
MALAT1-203ENST00000544868 KIF3BO15066 747 aa13.56□□□□□ -0.24
MALAT1-203ENST00000544868 ATP1B4Q9UN42 357 aaPredicted RBP13.56□□□□□ -0.24
MALAT1-203ENST00000544868 EN1Q05925 392 aaPredicted RBP13.55□□□□□ -0.24
MALAT1-203ENST00000544868 TMEM2Q9UHN6 1383 aa13.55□□□□□ -0.24
MALAT1-203ENST00000544868 PTCH1Q13635 1447 aa13.55□□□□□ -0.24
MALAT1-203ENST00000544868 REM2Q8IYK8 340 aaPredicted RBP13.54□□□□□ -0.24
MALAT1-203ENST00000544868 DHX29Q7Z478 1369 aaKnown RBP13.54□□□□□ -0.24
MALAT1-203ENST00000544868 ARHGAP35Q9NRY4 1499 aa13.54□□□□□ -0.24
MALAT1-203ENST00000544868 GLI3P10071 1580 aa13.53□□□□□ -0.24
MALAT1-203ENST00000544868 CHD2O14647 1828 aaKnown RBP13.52□□□□□ -0.25
MALAT1-203ENST00000544868 C19orf44Q9H6X5 657 aa13.51□□□□□ -0.25
MALAT1-203ENST00000544868 KIAA1107Q9UPP5 1409 aa13.5□□□□□ -0.25
MALAT1-203ENST00000544868 SPON1Q9HCB6 807 aa13.5□□□□□ -0.25
MALAT1-203ENST00000544868 CFAP65Q6ZU64 1925 aaKnown RBP13.49□□□□□ -0.25
MALAT1-203ENST00000544868 COL13A1Q5TAT6 717 aaPredicted RBP13.49□□□□□ -0.25
MALAT1-203ENST00000544868 SPDYE1Q8NFV5 336 aaPredicted RBP13.49□□□□□ -0.25
MALAT1-203ENST00000544868 PLSCR2Q9NRY7 297 aa13.49□□□□□ -0.25
MALAT1-203ENST00000544868 RGPD1P0DJD0 1748 aa13.48□□□□□ -0.25
MALAT1-203ENST00000544868 STAG3Q9UJ98 1225 aa13.48□□□□□ -0.25
MALAT1-203ENST00000544868 FBXO3Q9UK99 471 aa13.48□□□□□ -0.25
MALAT1-203ENST00000544868 PLEKHH2Q8IVE3 1493 aa13.48□□□□□ -0.25
MALAT1-203ENST00000544868 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.47□□□□□ -0.25
MALAT1-203ENST00000544868 SEPT12Q8IYM1 358 aa13.47□□□□□ -0.25
MALAT1-203ENST00000544868 TNS4Q8IZW8 715 aa13.47□□□□□ -0.25
MALAT1-203ENST00000544868 DDX17Q92841 729 aaKnown RBP13.47□□□□□ -0.25
MALAT1-203ENST00000544868 HSPA6P17066 643 aa13.46□□□□□ -0.25
MALAT1-203ENST00000544868 KRT27Q7Z3Y8 459 aa13.46□□□□□ -0.25
MALAT1-203ENST00000544868 PIK3C2BO00750 1634 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms