RNA–Protein interactions for RNA: ENST00000544216.7

LSM14A-203, Transcript of LSM14A, mRNA processing body assembly factor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LSM14A, Length 3,596 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM14A-203ENST00000544216 PDE3BQ13370 1112 aa18.43■□□□□ 0.54
LSM14A-203ENST00000544216 AMER1Q5JTC6 1135 aaPredicted RBP18.43■□□□□ 0.54
LSM14A-203ENST00000544216 CFAP65Q6ZU64 1925 aaKnown RBP18.43■□□□□ 0.54
LSM14A-203ENST00000544216 RNF123Q5XPI4 1314 aa18.43■□□□□ 0.54
LSM14A-203ENST00000544216 ABCA9Q8IUA7 1624 aa18.42■□□□□ 0.54
LSM14A-203ENST00000544216 TNNT2P45379 298 aaPredicted RBP18.41■□□□□ 0.54
LSM14A-203ENST00000544216 CCDC146Q8IYE0 955 aa18.41■□□□□ 0.54
LSM14A-203ENST00000544216 MADDQ8WXG6 1647 aa18.4■□□□□ 0.54
LSM14A-203ENST00000544216 SPHKAPQ2M3C7 1700 aa18.4■□□□□ 0.54
LSM14A-203ENST00000544216 ZNF518AQ6AHZ1 1483 aa18.4■□□□□ 0.54
LSM14A-203ENST00000544216 INO80Q9ULG1 1556 aaPredicted RBP18.39■□□□□ 0.53
LSM14A-203ENST00000544216 TET3O43151 1660 aa18.39■□□□□ 0.53
LSM14A-203ENST00000544216 LAMC1P11047 1609 aa18.38■□□□□ 0.53
LSM14A-203ENST00000544216 MSH5O43196 834 aa18.38■□□□□ 0.53
LSM14A-203ENST00000544216 CYB5RLQ6IPT4 315 aa18.38■□□□□ 0.53
LSM14A-203ENST00000544216 NOS1P29475 1434 aa18.37■□□□□ 0.53
LSM14A-203ENST00000544216 SAFB2Q14151 953 aaKnown RBP eCLIP18.37■□□□□ 0.53
LSM14A-203ENST00000544216 CENPJQ9HC77 1338 aaPredicted RBP18.35■□□□□ 0.53
LSM14A-203ENST00000544216 CARD14Q9BXL6 1004 aa18.34■□□□□ 0.53
LSM14A-203ENST00000544216 DEPDC5O75140 1603 aa18.33■□□□□ 0.53
LSM14A-203ENST00000544216 CEP152O94986 1710 aa18.33■□□□□ 0.52
LSM14A-203ENST00000544216 SLC12A5Q9H2X9 1139 aa18.33■□□□□ 0.52
LSM14A-203ENST00000544216 RNF17Q9BXT8 1623 aaKnown RBP18.33■□□□□ 0.52
LSM14A-203ENST00000544216 FANCIQ9NVI1 1328 aa18.32■□□□□ 0.52
LSM14A-203ENST00000544216 SLC24A1O60721 1099 aa18.32■□□□□ 0.52
LSM14A-203ENST00000544216 STK26Q9P289 416 aa18.32■□□□□ 0.52
LSM14A-203ENST00000544216 KIDINS220Q9ULH0 1771 aa18.32■□□□□ 0.52
LSM14A-203ENST00000544216 APAF1O14727 1248 aa18.31■□□□□ 0.52
LSM14A-203ENST00000544216 POGZQ7Z3K3 1410 aa18.31■□□□□ 0.52
LSM14A-203ENST00000544216 NPATQ14207 1427 aa18.31■□□□□ 0.52
LSM14A-203ENST00000544216 VWDEQ8N2E2 1590 aa18.3■□□□□ 0.52
LSM14A-203ENST00000544216 MROH1Q8NDA8 1641 aa18.29■□□□□ 0.52
LSM14A-203ENST00000544216 GOLGA2Q08379 1002 aa18.29■□□□□ 0.52
LSM14A-203ENST00000544216 EFCAB6Q5THR3 1501 aa18.29■□□□□ 0.52
LSM14A-203ENST00000544216 MORC1Q86VD1 984 aa18.29■□□□□ 0.52
LSM14A-203ENST00000544216 CRBNQ96SW2 442 aa18.29■□□□□ 0.52
LSM14A-203ENST00000544216 ASXL1Q8IXJ9 1541 aa18.29■□□□□ 0.52
LSM14A-203ENST00000544216 NEUROD2Q15784 382 aa18.29■□□□□ 0.52
LSM14A-203ENST00000544216 C14orf93Q9H972 538 aaKnown RBP18.28■□□□□ 0.52
LSM14A-203ENST00000544216 BLMP54132 1417 aaPredicted RBP18.28■□□□□ 0.52
LSM14A-203ENST00000544216 IQGAP1P46940 1657 aa18.28■□□□□ 0.52
LSM14A-203ENST00000544216 PLEKHH1Q9ULM0 1364 aa18.27■□□□□ 0.52
LSM14A-203ENST00000544216 PPRC1Q5VV67 1664 aaKnown RBP18.26■□□□□ 0.51
LSM14A-203ENST00000544216 C20orf194Q5TEA3 1177 aa18.26■□□□□ 0.51
LSM14A-203ENST00000544216 ERVK-7P63135 1459 aa18.26■□□□□ 0.51
LSM14A-203ENST00000544216 IDI1Q13907 227 aa18.25■□□□□ 0.51
LSM14A-203ENST00000544216 VGFO15240 615 aaPredicted RBP18.25■□□□□ 0.51
LSM14A-203ENST00000544216 NPM2Q86SE8 214 aaKnown RBP18.25■□□□□ 0.51
LSM14A-203ENST00000544216 KIF1BO60333 1816 aa18.25■□□□□ 0.51
LSM14A-203ENST00000544216 MAP3K4Q9Y6R4 1608 aa18.25■□□□□ 0.51
LSM14A-203ENST00000544216 STAG3Q9UJ98 1225 aa18.24■□□□□ 0.51
LSM14A-203ENST00000544216 MYOM2P54296 1465 aa18.24■□□□□ 0.51
LSM14A-203ENST00000544216 ABCA6Q8N139 1617 aa18.24■□□□□ 0.51
LSM14A-203ENST00000544216 MLH3Q9UHC1 1453 aa18.23■□□□□ 0.51
LSM14A-203ENST00000544216 DUSP27Q5VZP5 1158 aa18.23■□□□□ 0.51
LSM14A-203ENST00000544216 SKAP1Q86WV1 359 aa18.23■□□□□ 0.51
LSM14A-203ENST00000544216 SYNMO15061 1565 aa18.22■□□□□ 0.51
LSM14A-203ENST00000544216 FAM69CQ0P6D2 419 aa18.22■□□□□ 0.51
LSM14A-203ENST00000544216 CABP2Q9NPB3 220 aa18.22■□□□□ 0.51
LSM14A-203ENST00000544216 RRP7AQ9Y3A4 280 aaKnown RBP18.21■□□□□ 0.51
LSM14A-203ENST00000544216 ANP32AP39687 249 aaKnown RBP18.2■□□□□ 0.5
LSM14A-203ENST00000544216 MLECQ14165 292 aa18.2■□□□□ 0.5
LSM14A-203ENST00000544216 RPGRIP1LQ68CZ1 1315 aa18.2■□□□□ 0.5
LSM14A-203ENST00000544216 NSD3Q9BZ95 1437 aa18.2■□□□□ 0.5
LSM14A-203ENST00000544216 SPINK5Q9NQ38 1064 aaPredicted RBP18.2■□□□□ 0.5
LSM14A-203ENST00000544216 SRPK2P78362 688 aaKnown RBP18.2■□□□□ 0.5
LSM14A-203ENST00000544216 FBXO31Q5XUX0 539 aaPredicted RBP18.19■□□□□ 0.5
LSM14A-203ENST00000544216 MROH2AA6NES4 1674 aa18.19■□□□□ 0.5
LSM14A-203ENST00000544216 PIK3C2GO75747 1445 aa18.19■□□□□ 0.5
LSM14A-203ENST00000544216 KDM5AP29375 1690 aaKnown RBP18.19■□□□□ 0.5
LSM14A-203ENST00000544216 ZMYM4Q5VZL5 1548 aa18.19■□□□□ 0.5
LSM14A-203ENST00000544216 HECW2Q9P2P5 1572 aa18.18■□□□□ 0.5
LSM14A-203ENST00000544216 NPC1L1Q9UHC9 1359 aa18.18■□□□□ 0.5
LSM14A-203ENST00000544216 FRMPD1Q5SYB0 1578 aa18.18■□□□□ 0.5
LSM14A-203ENST00000544216 SLFN5Q08AF3 891 aa18.17■□□□□ 0.5
LSM14A-203ENST00000544216 YEATS2Q9ULM3 1422 aa18.17■□□□□ 0.5
LSM14A-203ENST00000544216 INSRP06213 1382 aa18.17■□□□□ 0.5
LSM14A-203ENST00000544216 EVC2Q86UK5 1308 aa18.17■□□□□ 0.5
LSM14A-203ENST00000544216 LMTK2Q8IWU2 1503 aa18.17■□□□□ 0.5
LSM14A-203ENST00000544216 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.17■□□□□ 0.5
LSM14A-203ENST00000544216 MTHFSP49914 203 aa18.16■□□□□ 0.5
LSM14A-203ENST00000544216 POGKQ9P215 609 aa18.16■□□□□ 0.5
LSM14A-203ENST00000544216 MINK1Q8N4C8 1332 aaPredicted RBP18.16■□□□□ 0.5
LSM14A-203ENST00000544216 DMRT2Q9Y5R5 561 aa18.16■□□□□ 0.5
LSM14A-203ENST00000544216 ABCC3O15438 1527 aa18.16■□□□□ 0.5
LSM14A-203ENST00000544216 ADGRB3O60242 1522 aa18.15■□□□□ 0.5
LSM14A-203ENST00000544216 CGNL1Q0VF96 1302 aa18.14■□□□□ 0.5
LSM14A-203ENST00000544216 BCAR3O75815 825 aa18.14■□□□□ 0.49
LSM14A-203ENST00000544216 TCERG1O14776 1098 aaKnown RBP18.14■□□□□ 0.49
LSM14A-203ENST00000544216 CANXP27824 592 aaKnown RBP18.14■□□□□ 0.49
LSM14A-203ENST00000544216 ZNF521Q96K83 1311 aa18.13■□□□□ 0.49
LSM14A-203ENST00000544216 KIAA1210Q9ULL0 1709 aa18.13■□□□□ 0.49
LSM14A-203ENST00000544216 SLC52A1Q9NWF4 448 aa18.13■□□□□ 0.49
LSM14A-203ENST00000544216 NEO1Q92859 1461 aa18.13■□□□□ 0.49
LSM14A-203ENST00000544216 CFAP74Q9C0B2 1584 aa18.13■□□□□ 0.49
LSM14A-203ENST00000544216 CFAP53Q96M91 514 aa18.12■□□□□ 0.49
LSM14A-203ENST00000544216 NOP58Q9Y2X3 529 aaKnown RBP18.12■□□□□ 0.49
LSM14A-203ENST00000544216 NRXN1Q9ULB1 1477 aa18.12■□□□□ 0.49
LSM14A-203ENST00000544216 MYOM1P52179 1685 aa18.12■□□□□ 0.49
LSM14A-203ENST00000544216 SBNO2Q9Y2G9 1366 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms