RNA–Protein interactions for RNA: ENST00000543988.1

OTUB1-212, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 1 (best) BASIC

Gene OTUB1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-212ENST00000543988 PPP1R15AO75807 674 aaPredicted RBP32.3■■■□□ 2.76
OTUB1-212ENST00000543988 HRCP23327 699 aa32.3■■■□□ 2.76
OTUB1-212ENST00000543988 PLEKHG1Q9ULL1 1385 aa32.3■■■□□ 2.76
OTUB1-212ENST00000543988 NUTM2DQ5VT03 806 aaPredicted RBP32.28■■■□□ 2.76
OTUB1-212ENST00000543988 ABCF1Q8NE71 845 aaKnown RBP eCLIP32.28■■■□□ 2.76
OTUB1-212ENST00000543988 HDGFP51858 240 aaKnown RBP32.27■■■□□ 2.76
OTUB1-212ENST00000543988 SENP3Q9H4L4 574 aaPredicted RBP32.26■■■□□ 2.75
OTUB1-212ENST00000543988 CCDC144AA2RUR9 1427 aa32.26■■■□□ 2.75
OTUB1-212ENST00000543988 ZNF326Q5BKZ1 582 aaKnown RBP32.25■■■□□ 2.75
OTUB1-212ENST00000543988 SLC26A8Q96RN1 970 aa32.24■■■□□ 2.75
OTUB1-212ENST00000543988 CPS1P31327 1500 aa32.24■■■□□ 2.75
OTUB1-212ENST00000543988 ILDR1Q86SU0 546 aaPredicted RBP32.23■■■□□ 2.75
OTUB1-212ENST00000543988 FBXO41Q8TF61 875 aa32.22■■■□□ 2.75
OTUB1-212ENST00000543988 BCANQ96GW7 911 aa32.22■■■□□ 2.75
OTUB1-212ENST00000543988 IQSEC2Q5JU85 1478 aa32.21■■■□□ 2.75
OTUB1-212ENST00000543988 NEXMIFQ5QGS0 1516 aa32.21■■■□□ 2.75
OTUB1-212ENST00000543988 KIF1BO60333 1816 aa32.19■■■□□ 2.74
OTUB1-212ENST00000543988 STRCP1A6NGW2 1772 aa32.17■■■□□ 2.74
OTUB1-212ENST00000543988 ADAMTS13Q76LX8 1427 aa32.17■■■□□ 2.74
OTUB1-212ENST00000543988 SPATA31E1Q6ZUB1 1445 aa32.15■■■□□ 2.74
OTUB1-212ENST00000543988 LRRC7Q96NW7 1537 aa32.11■■■□□ 2.73
OTUB1-212ENST00000543988 ANKRD30BQ9BXX2 1392 aa32.11■■■□□ 2.73
OTUB1-212ENST00000543988 DIP2AQ14689 1571 aa32.11■■■□□ 2.73
OTUB1-212ENST00000543988 SETBP1Q9Y6X0 1596 aa32.11■■■□□ 2.73
OTUB1-212ENST00000543988 TBX22Q9Y458 520 aa32.1■■■□□ 2.73
OTUB1-212ENST00000543988 TRIM26Q12899 539 aaPredicted RBP32.09■■■□□ 2.73
OTUB1-212ENST00000543988 NRXN3Q9Y4C0 1643 aa32.08■■■□□ 2.73
OTUB1-212ENST00000543988 RPGRIP1LQ68CZ1 1315 aa32.08■■■□□ 2.73
OTUB1-212ENST00000543988 NWD1Q149M9 1564 aa32.08■■■□□ 2.73
OTUB1-212ENST00000543988 KCNA6P17658 529 aa32.08■■■□□ 2.73
OTUB1-212ENST00000543988 RGL3Q3MIN7 710 aa32.05■■■□□ 2.72
OTUB1-212ENST00000543988 NKTRP30414 1462 aaKnown RBP32.03■■■□□ 2.72
OTUB1-212ENST00000543988 VGFO15240 615 aaPredicted RBP32.02■■■□□ 2.72
OTUB1-212ENST00000543988 PPLO60437 1756 aa32.01■■■□□ 2.71
OTUB1-212ENST00000543988 PIK3R4Q99570 1358 aa32■■■□□ 2.71
OTUB1-212ENST00000543988 TMEM94Q12767 1356 aa31.97■■■□□ 2.71
OTUB1-212ENST00000543988 UBAP1LF5GYI3 381 aa31.97■■■□□ 2.71
OTUB1-212ENST00000543988 PTPRUQ92729 1446 aa31.96■■■□□ 2.71
OTUB1-212ENST00000543988 METP08581 1390 aa31.95■■■□□ 2.71
OTUB1-212ENST00000543988 CHD2O14647 1828 aaKnown RBP31.94■■■□□ 2.7
OTUB1-212ENST00000543988 PROSER2Q86WR7 435 aaPredicted RBP31.94■■■□□ 2.7
OTUB1-212ENST00000543988 ADGRF5Q8IZF2 1346 aa31.94■■■□□ 2.7
OTUB1-212ENST00000543988 IFT172Q9UG01 1749 aa31.93■■■□□ 2.7
OTUB1-212ENST00000543988 RBM33Q96EV2 1170 aaKnown RBP31.92■■■□□ 2.7
OTUB1-212ENST00000543988 ALKQ9UM73 1620 aa31.89■■■□□ 2.7
OTUB1-212ENST00000543988 AMOTL2Q9Y2J4 779 aa31.89■■■□□ 2.7
OTUB1-212ENST00000543988 XIRP1Q702N8 1843 aaKnown RBP31.89■■■□□ 2.69
OTUB1-212ENST00000543988 XRN1Q8IZH2 1706 aaKnown RBP31.88■■■□□ 2.69
OTUB1-212ENST00000543988 SETD1AO15047 1707 aaKnown RBP31.86■■■□□ 2.69
OTUB1-212ENST00000543988 MYOM2P54296 1465 aa31.86■■■□□ 2.69
OTUB1-212ENST00000543988 PIK3C2GO75747 1445 aa31.86■■■□□ 2.69
OTUB1-212ENST00000543988 TOM1O60784 492 aa31.84■■■□□ 2.69
OTUB1-212ENST00000543988 NRXN1Q9ULB1 1477 aa31.83■■■□□ 2.69
OTUB1-212ENST00000543988 DHX57Q6P158 1386 aaKnown RBP31.81■■■□□ 2.68
OTUB1-212ENST00000543988 PIP4K2BP78356 416 aa31.79■■■□□ 2.68
OTUB1-212ENST00000543988 SCAF1Q9H7N4 1312 aaKnown RBP31.77■■■□□ 2.68
OTUB1-212ENST00000543988 NCOA3Q9Y6Q9 1424 aa31.77■■■□□ 2.68
OTUB1-212ENST00000543988 MSH6P52701 1360 aa31.77■■■□□ 2.68
OTUB1-212ENST00000543988 ASXL1Q8IXJ9 1541 aa31.76■■■□□ 2.68
OTUB1-212ENST00000543988 PRAG1Q86YV5 1406 aa31.75■■■□□ 2.67
OTUB1-212ENST00000543988 PTCH1Q13635 1447 aa31.74■■■□□ 2.67
OTUB1-212ENST00000543988 C14orf37Q86TY3 774 aa31.73■■■□□ 2.67
OTUB1-212ENST00000543988 DCAF11Q8TEB1 546 aa31.73■■■□□ 2.67
OTUB1-212ENST00000543988 ROBO2Q9HCK4 1378 aa31.72■■■□□ 2.67
OTUB1-212ENST00000543988 C14orf93Q9H972 538 aaKnown RBP31.7■■■□□ 2.67
OTUB1-212ENST00000543988 KDM2AQ9Y2K7 1162 aa31.7■■■□□ 2.67
OTUB1-212ENST00000543988 CFAP70Q5T0N1 1121 aa31.68■■■□□ 2.66
OTUB1-212ENST00000543988 TMEM132EQ6IEE7 984 aa31.68■■■□□ 2.66
OTUB1-212ENST00000543988 LRPPRCP42704 1394 aaKnown RBP31.67■■■□□ 2.66
OTUB1-212ENST00000543988 SIN3AQ96ST3 1273 aa31.66■■■□□ 2.66
OTUB1-212ENST00000543988 LAMC1P11047 1609 aa31.66■■■□□ 2.66
OTUB1-212ENST00000543988 C19orf44Q9H6X5 657 aa31.65■■■□□ 2.66
OTUB1-212ENST00000543988 STAC3Q96MF2 364 aa31.64■■■□□ 2.66
OTUB1-212ENST00000543988 TECPR2O15040 1411 aa31.64■■■□□ 2.66
OTUB1-212ENST00000543988 ADGRL3Q9HAR2 1447 aa31.64■■■□□ 2.66
OTUB1-212ENST00000543988 STK26Q9P289 416 aa31.63■■■□□ 2.65
OTUB1-212ENST00000543988 YTHDC2Q9H6S0 1430 aaKnown RBP31.63■■■□□ 2.65
OTUB1-212ENST00000543988 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.61■■■□□ 2.65
OTUB1-212ENST00000543988 DCCP43146 1447 aa31.61■■■□□ 2.65
OTUB1-212ENST00000543988 ABCC11Q96J66 1382 aa31.61■■■□□ 2.65
OTUB1-212ENST00000543988 PCGF6Q9BYE7 350 aa31.61■■■□□ 2.65
OTUB1-212ENST00000543988 HSPA1LP34931 641 aa31.6■■■□□ 2.65
OTUB1-212ENST00000543988 ATF3P18847 181 aa31.59■■■□□ 2.65
OTUB1-212ENST00000543988 FAM135BQ49AJ0 1406 aa31.58■■■□□ 2.65
OTUB1-212ENST00000543988 NALCNQ8IZF0 1738 aa31.58■■■□□ 2.65
OTUB1-212ENST00000543988 CADPS2Q86UW7 1296 aa31.58■■■□□ 2.65
OTUB1-212ENST00000543988 SLAIN2Q9P270 581 aa31.58■■■□□ 2.65
OTUB1-212ENST00000543988 ADGRB1O14514 1584 aa31.58■■■□□ 2.65
OTUB1-212ENST00000543988 NEUROD1Q13562 356 aa31.57■■■□□ 2.64
OTUB1-212ENST00000543988 KNDC1Q76NI1 1749 aa31.55■■■□□ 2.64
OTUB1-212ENST00000543988 L3MBTL2Q969R5 705 aa31.53■■■□□ 2.64
OTUB1-212ENST00000543988 ROBO1Q9Y6N7 1651 aa31.53■■■□□ 2.64
OTUB1-212ENST00000543988 PLEKHH1Q9ULM0 1364 aa31.53■■■□□ 2.64
OTUB1-212ENST00000543988 WAPLQ7Z5K2 1190 aa31.51■■■□□ 2.63
OTUB1-212ENST00000543988 MST1RQ04912 1400 aa31.49■■■□□ 2.63
OTUB1-212ENST00000543988 DLC1Q96QB1 1528 aa31.45■■■□□ 2.63
OTUB1-212ENST00000543988 SIRT1Q96EB6 747 aa31.45■■■□□ 2.63
OTUB1-212ENST00000543988 CDC42BPGQ6DT37 1551 aa31.43■■■□□ 2.62
OTUB1-212ENST00000543988 PRAM1Q96QH2 718 aa31.42■■■□□ 2.62
OTUB1-212ENST00000543988 TRAK1Q9UPV9 953 aa31.41■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms