RNA–Protein interactions for RNA: ENST00000543309.5

TRIM65-204, Transcript of tripartite motif containing 65, humanhuman

TSL 2

Gene TRIM65, Length 865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-204ENST00000543309 A2ML1A8K2U0 1454 aa23.08■■□□□ 1.29
TRIM65-204ENST00000543309 RPGRIP1LQ68CZ1 1315 aa23.08■■□□□ 1.28
TRIM65-204ENST00000543309 NCKAP5LQ9HCH0 1330 aa23.08■■□□□ 1.28
TRIM65-204ENST00000543309 MYO5BQ9ULV0 1848 aa23.07■■□□□ 1.28
TRIM65-204ENST00000543309 POLR1AO95602 1720 aaPredicted RBP23.06■■□□□ 1.28
TRIM65-204ENST00000543309 PPLO60437 1756 aa23.05■■□□□ 1.28
TRIM65-204ENST00000543309 DISP3Q9P2K9 1392 aa23.04■■□□□ 1.28
TRIM65-204ENST00000543309 RGL3Q3MIN7 710 aa23.04■■□□□ 1.28
TRIM65-204ENST00000543309 ZNF335Q9H4Z2 1342 aaPredicted RBP23.04■■□□□ 1.28
TRIM65-204ENST00000543309 MYOM2P54296 1465 aa23.04■■□□□ 1.28
TRIM65-204ENST00000543309 PPP1R15AO75807 674 aaPredicted RBP23.03■■□□□ 1.28
TRIM65-204ENST00000543309 CHGAP10645 457 aaKnown RBP23.03■■□□□ 1.28
TRIM65-204ENST00000543309 NEXMIFQ5QGS0 1516 aa23.03■■□□□ 1.28
TRIM65-204ENST00000543309 STAG3Q9UJ98 1225 aa23.02■■□□□ 1.28
TRIM65-204ENST00000543309 ZNF326Q5BKZ1 582 aaKnown RBP23■■□□□ 1.27
TRIM65-204ENST00000543309 DCAF11Q8TEB1 546 aa23■■□□□ 1.27
TRIM65-204ENST00000543309 ZFYVE9O95405 1425 aa22.99■■□□□ 1.27
TRIM65-204ENST00000543309 NRXN1Q9ULB1 1477 aa22.98■■□□□ 1.27
TRIM65-204ENST00000543309 SLIT1O75093 1534 aa22.98■■□□□ 1.27
TRIM65-204ENST00000543309 TMEM2Q9UHN6 1383 aa22.96■■□□□ 1.27
TRIM65-204ENST00000543309 PRAG1Q86YV5 1406 aa22.96■■□□□ 1.27
TRIM65-204ENST00000543309 ARHGAP23Q9P227 1491 aa22.96■■□□□ 1.27
TRIM65-204ENST00000543309 THEMISQ8N1K5 641 aaPredicted RBP22.95■■□□□ 1.26
TRIM65-204ENST00000543309 RIMS2Q9UQ26 1411 aa22.94■■□□□ 1.26
TRIM65-204ENST00000543309 VGFO15240 615 aaPredicted RBP22.94■■□□□ 1.26
TRIM65-204ENST00000543309 HDGFP51858 240 aaKnown RBP22.93■■□□□ 1.26
TRIM65-204ENST00000543309 ILDR2Q71H61 639 aa22.92■■□□□ 1.26
TRIM65-204ENST00000543309 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.92■■□□□ 1.26
TRIM65-204ENST00000543309 KDM2AQ9Y2K7 1162 aa22.92■■□□□ 1.26
TRIM65-204ENST00000543309 KIAA1210Q9ULL0 1709 aa22.91■■□□□ 1.26
TRIM65-204ENST00000543309 CPS1P31327 1500 aa22.9■■□□□ 1.26
TRIM65-204ENST00000543309 PIK3C2GO75747 1445 aa22.9■■□□□ 1.26
TRIM65-204ENST00000543309 TRPM1Q7Z4N2 1603 aa22.9■■□□□ 1.26
TRIM65-204ENST00000543309 UBAP1LF5GYI3 381 aa22.89■■□□□ 1.25
TRIM65-204ENST00000543309 NBPF8Q3BBV2 869 aa22.89■■□□□ 1.25
TRIM65-204ENST00000543309 RALGAPBQ86X10 1494 aa22.89■■□□□ 1.25
TRIM65-204ENST00000543309 LAMC1P11047 1609 aa22.88■■□□□ 1.25
TRIM65-204ENST00000543309 ADGRF5Q8IZF2 1346 aa22.87■■□□□ 1.25
TRIM65-204ENST00000543309 MED14O60244 1454 aa22.85■■□□□ 1.25
TRIM65-204ENST00000543309 EID1Q9Y6B2 187 aa22.84■■□□□ 1.25
TRIM65-204ENST00000543309 SCAF11Q99590 1463 aaKnown RBP22.84■■□□□ 1.25
TRIM65-204ENST00000543309 SETBP1Q9Y6X0 1596 aa22.84■■□□□ 1.25
TRIM65-204ENST00000543309 SOCS7O14512 581 aa22.83■■□□□ 1.25
TRIM65-204ENST00000543309 IQGAP1P46940 1657 aa22.83■■□□□ 1.24
TRIM65-204ENST00000543309 PLEKHG1Q9ULL1 1385 aa22.82■■□□□ 1.24
TRIM65-204ENST00000543309 GPRASP1Q5JY77 1395 aa22.81■■□□□ 1.24
TRIM65-204ENST00000543309 NPHP4O75161 1426 aaPredicted RBP22.81■■□□□ 1.24
TRIM65-204ENST00000543309 NRXN3Q9Y4C0 1643 aa22.8■■□□□ 1.24
TRIM65-204ENST00000543309 TXNDC2Q86VQ3 553 aa22.8■■□□□ 1.24
TRIM65-204ENST00000543309 LTKP29376 864 aa22.79■■□□□ 1.24
TRIM65-204ENST00000543309 NUTM2DQ5VT03 806 aaPredicted RBP22.79■■□□□ 1.24
TRIM65-204ENST00000543309 ANKLE2Q86XL3 938 aa22.79■■□□□ 1.24
TRIM65-204ENST00000543309 C14orf93Q9H972 538 aaKnown RBP22.79■■□□□ 1.24
TRIM65-204ENST00000543309 ROCK2O75116 1388 aaKnown RBP22.77■■□□□ 1.24
TRIM65-204ENST00000543309 ALKQ9UM73 1620 aa22.77■■□□□ 1.24
TRIM65-204ENST00000543309 SETD1AO15047 1707 aaKnown RBP22.77■■□□□ 1.23
TRIM65-204ENST00000543309 DIP2AQ14689 1571 aa22.76■■□□□ 1.23
TRIM65-204ENST00000543309 ADGRB1O14514 1584 aa22.75■■□□□ 1.23
TRIM65-204ENST00000543309 CFAP70Q5T0N1 1121 aa22.73■■□□□ 1.23
TRIM65-204ENST00000543309 STRCP1A6NGW2 1772 aa22.73■■□□□ 1.23
TRIM65-204ENST00000543309 ADAMTS13Q76LX8 1427 aa22.72■■□□□ 1.23
TRIM65-204ENST00000543309 NBPF1Q3BBV0 1214 aa22.71■■□□□ 1.23
TRIM65-204ENST00000543309 MED1Q15648 1581 aaPredicted RBP22.71■■□□□ 1.23
TRIM65-204ENST00000543309 TOM1O60784 492 aa22.7■■□□□ 1.22
TRIM65-204ENST00000543309 CARD11Q9BXL7 1154 aa22.7■■□□□ 1.22
TRIM65-204ENST00000543309 ASXL1Q8IXJ9 1541 aa22.7■■□□□ 1.22
TRIM65-204ENST00000543309 SCAF1Q9H7N4 1312 aaKnown RBP22.69■■□□□ 1.22
TRIM65-204ENST00000543309 HSPA1LP34931 641 aa22.67■■□□□ 1.22
TRIM65-204ENST00000543309 PIP4K2BP78356 416 aa22.67■■□□□ 1.22
TRIM65-204ENST00000543309 TBX22Q9Y458 520 aa22.67■■□□□ 1.22
TRIM65-204ENST00000543309 LRRC7Q96NW7 1537 aa22.66■■□□□ 1.22
TRIM65-204ENST00000543309 USP47Q96K76 1375 aa22.65■■□□□ 1.22
TRIM65-204ENST00000543309 EIF4G2P78344 907 aaKnown RBP eCLIP22.65■■□□□ 1.224e-13■■■■■ 71.7
TRIM65-204ENST00000543309 BCANQ96GW7 911 aa22.65■■□□□ 1.22
TRIM65-204ENST00000543309 PIK3R4Q99570 1358 aa22.63■■□□□ 1.21
TRIM65-204ENST00000543309 YTHDC2Q9H6S0 1430 aaKnown RBP22.63■■□□□ 1.21
TRIM65-204ENST00000543309 EIF3AQ14152 1382 aaKnown RBP22.63■■□□□ 1.21
TRIM65-204ENST00000543309 KNDC1Q76NI1 1749 aa22.62■■□□□ 1.21
TRIM65-204ENST00000543309 METP08581 1390 aa22.62■■□□□ 1.21
TRIM65-204ENST00000543309 LRPPRCP42704 1394 aaKnown RBP22.62■■□□□ 1.21
TRIM65-204ENST00000543309 DLC1Q96QB1 1528 aa22.61■■□□□ 1.21
TRIM65-204ENST00000543309 TECPR2O15040 1411 aa22.6■■□□□ 1.21
TRIM65-204ENST00000543309 TMEM132EQ6IEE7 984 aa22.6■■□□□ 1.21
TRIM65-204ENST00000543309 ARHGEF28Q8N1W1 1705 aaKnown RBP22.6■■□□□ 1.21
TRIM65-204ENST00000543309 SLC26A8Q96RN1 970 aa22.59■■□□□ 1.21
TRIM65-204ENST00000543309 ABCC11Q96J66 1382 aa22.59■■□□□ 1.21
TRIM65-204ENST00000543309 SENP3Q9H4L4 574 aaPredicted RBP22.58■■□□□ 1.21
TRIM65-204ENST00000543309 HSPA5P11021 654 aaKnown RBP22.57■■□□□ 1.2
TRIM65-204ENST00000543309 XIRP1Q702N8 1843 aaKnown RBP22.57■■□□□ 1.2
TRIM65-204ENST00000543309 XRN1Q8IZH2 1706 aaKnown RBP22.57■■□□□ 1.2
TRIM65-204ENST00000543309 CHD2O14647 1828 aaKnown RBP22.55■■□□□ 1.2
TRIM65-204ENST00000543309 SIRT1Q96EB6 747 aa22.54■■□□□ 1.2
TRIM65-204ENST00000543309 FAM135BQ49AJ0 1406 aa22.53■■□□□ 1.2
TRIM65-204ENST00000543309 PTPRUQ92729 1446 aa22.53■■□□□ 1.2
TRIM65-204ENST00000543309 NWD1Q149M9 1564 aa22.53■■□□□ 1.2
TRIM65-204ENST00000543309 SBNO2Q9Y2G9 1366 aa22.52■■□□□ 1.2
TRIM65-204ENST00000543309 PTCH1Q13635 1447 aa22.52■■□□□ 1.2
TRIM65-204ENST00000543309 TRAK1Q9UPV9 953 aa22.52■■□□□ 1.2
TRIM65-204ENST00000543309 ST20-MTHFSA0A0A6YYL1 179 aa22.51■■□□□ 1.19
TRIM65-204ENST00000543309 QRICH2Q9H0J4 1663 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms