RNA–Protein interactions for RNA: ENST00000543309.5

TRIM65-204, Transcript of tripartite motif containing 65, humanhuman

TSL 2

Gene TRIM65, Length 865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-204ENST00000543309 SF3B1O75533 1304 aaKnown RBP eCLIP17.13■□□□□ 0.331e-6■■■■■ 118
TRIM65-204ENST00000543309 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.25■□□□□ 0.354e-7■■■■■ 73.7
TRIM65-204ENST00000543309 EIF4G2P78344 907 aaKnown RBP eCLIP22.65■■□□□ 1.224e-13■■■■■ 71.7
TRIM65-204ENST00000543309 TARDBPQ13148 414 aaKnown RBP eCLIP15.14■□□□□ 0.018e-11■■■■■ 63.2
TRIM65-204ENST00000543309 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.95■□□□□ 0.148e-8■■■■■ 53
TRIM65-204ENST00000543309 NKRFO15226 690 aaKnown RBP eCLIP18.03■□□□□ 0.485e-12■■■■■ 46
TRIM65-204ENST00000543309 AQRO60306 1485 aaKnown RBP eCLIP26.56■■□□□ 1.845e-9■■■■■ 37.9
TRIM65-204ENST00000543309 SF3B4Q15427 424 aaKnown RBP eCLIP14.34□□□□□ -0.111e-7■■■■■ 29.3
TRIM65-204ENST00000543309 SRSF7Q16629 238 aaKnown RBP eCLIP13.32□□□□□ -0.287e-9■■■■■ 29.1
TRIM65-204ENST00000543309 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.24■□□□□ 0.356e-8■■■■■ 28.6
TRIM65-204ENST00000543309 RBM15Q96T37 977 aaKnown RBP eCLIP16.22■□□□□ 0.198e-8■■■■□ 25.8
TRIM65-204ENST00000543309 RBFOX2O43251 390 aaKnown RBP eCLIP12.96□□□□□ -0.334e-10■■■■□ 23.3
TRIM65-204ENST00000543309 SRSF1Q07955 248 aaKnown RBP eCLIP14.3□□□□□ -0.122e-6■■■■□ 23.2
TRIM65-204ENST00000543309 FMR1Q06787 632 aaKnown RBP eCLIP18.82■□□□□ 0.62e-6■■■■□ 22.7
TRIM65-204ENST00000543309 NONOQ15233 471 aaKnown RBP eCLIP18.32■□□□□ 0.522e-8■■■■□ 21
TRIM65-204ENST00000543309 EFTUD2Q15029 972 aaKnown RBP eCLIP15.92■□□□□ 0.143e-6■■■■□ 20
TRIM65-204ENST00000543309 DDX6P26196 483 aaKnown RBP eCLIP16.71■□□□□ 0.273e-6■■■■□ 20
TRIM65-204ENST00000543309 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.85■□□□□ 0.453e-6■■■■□ 19.8
TRIM65-204ENST00000543309 GTF2F1P35269 517 aaKnown RBP eCLIP16.72■□□□□ 0.272e-12■■■■□ 19.5
TRIM65-204ENST00000543309 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.71■■□□□ 1.551e-6■■■□□ 18.7
TRIM65-204ENST00000543309 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.09□□□□□ -0.313e-15■■■□□ 18.7
TRIM65-204ENST00000543309 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.68■□□□□ 0.264e-6■■■□□ 18.6
TRIM65-204ENST00000543309 U2AF2P26368 475 aaKnown RBP eCLIP18.41■□□□□ 0.542e-6■■■□□ 18.5
TRIM65-204ENST00000543309 SF3A3Q12874 501 aaKnown RBP eCLIP15.25■□□□□ 0.031e-6■■■□□ 18.3
TRIM65-204ENST00000543309 AARSP49588 968 aaKnown RBP eCLIP17.19■□□□□ 0.342e-6■■■□□ 17.5
TRIM65-204ENST00000543309 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.37■□□□□ 0.537e-7■■■□□ 16.7
TRIM65-204ENST00000543309 EWSR1Q01844 656 aaKnown RBP eCLIP12.54□□□□□ -0.41e-6■■■□□ 16.5
TRIM65-204ENST00000543309 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.6□□□□□ -0.074e-7■■■□□ 15.7
TRIM65-204ENST00000543309 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.54■■□□□ 1.522e-7■■■□□ 15.5
TRIM65-204ENST00000543309 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.02■□□□□ 0.327e-6■■■□□ 14.7
TRIM65-204ENST00000543309 PRPF4O43172 522 aaKnown RBP eCLIP15.74■□□□□ 0.111e-7■■□□□ 14.3
TRIM65-204ENST00000543309 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.41■□□□□ 0.222e-7■■□□□ 13.8
TRIM65-204ENST00000543309 RBM22Q9NW64 420 aaKnown RBP eCLIP16.31■□□□□ 0.22e-6■■□□□ 13.7
TRIM65-204ENST00000543309 TAF15Q92804 592 aaKnown RBP eCLIP12.48□□□□□ -0.411e-11■■□□□ 13
TRIM65-204ENST00000543309 PPIGQ13427 754 aaKnown RBP eCLIP17.36■□□□□ 0.371e-7■■□□□ 13
TRIM65-204ENST00000543309 FUSP35637 526 aaKnown RBP eCLIP10.26□□□□□ -0.773e-6■■□□□ 12.4
TRIM65-204ENST00000543309 SRSF9Q13242 221 aaKnown RBP eCLIP10.27□□□□□ -0.772e-6■■□□□ 12
TRIM65-204ENST00000543309 FKBP4Q02790 459 aaKnown RBP eCLIP19.51■□□□□ 0.714e-6■□□□□ 11.3
TRIM65-204ENST00000543309 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.19□□□□□ -0.148e-9■□□□□ 10.9
TRIM65-204ENST00000543309 SAFBQ15424 915 aaKnown RBP eCLIP18.44■□□□□ 0.545e-6■□□□□ 10.8
TRIM65-204ENST00000543309 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.34■□□□□ 0.053e-6■□□□□ 10.2
TRIM65-204ENST00000543309 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.9■□□□□ 0.627e-6■□□□□ 9.9
TRIM65-204ENST00000543309 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.62■■□□□ 1.371e-6■□□□□ 9.8
TRIM65-204ENST00000543309 YBX3P16989 372 aaKnown RBP eCLIP19.97■□□□□ 0.792e-8■□□□□ 8.8
TRIM65-204ENST00000543309 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.29■□□□□ 0.361e-6■□□□□ 8.1
Retrieved 45 of 45 RNA–protein pairs in 10.9 ms