RNA–Protein interactions for RNA: ENST00000543002.5

RABGGTA-203, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 1,329 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-203ENST00000543002 NEURL4Q96JN8 1562 aa25.06■■□□□ 1.6
RABGGTA-203ENST00000543002 HDGFP51858 240 aaKnown RBP25.06■■□□□ 1.6
RABGGTA-203ENST00000543002 MED14O60244 1454 aa25.05■■□□□ 1.6
RABGGTA-203ENST00000543002 ZNF326Q5BKZ1 582 aaKnown RBP25.05■■□□□ 1.6
RABGGTA-203ENST00000543002 SPATA31E1Q6ZUB1 1445 aa25.03■■□□□ 1.6
RABGGTA-203ENST00000543002 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.03■■□□□ 1.6
RABGGTA-203ENST00000543002 NPHP4O75161 1426 aaPredicted RBP25.02■■□□□ 1.6
RABGGTA-203ENST00000543002 RPGRIP1LQ68CZ1 1315 aa24.99■■□□□ 1.59
RABGGTA-203ENST00000543002 PPP1R15AO75807 674 aaPredicted RBP24.98■■□□□ 1.59
RABGGTA-203ENST00000543002 NEXMIFQ5QGS0 1516 aa24.97■■□□□ 1.59
RABGGTA-203ENST00000543002 RGL3Q3MIN7 710 aa24.97■■□□□ 1.59
RABGGTA-203ENST00000543002 NUTM2DQ5VT03 806 aaPredicted RBP24.97■■□□□ 1.59
RABGGTA-203ENST00000543002 IQGAP1P46940 1657 aa24.96■■□□□ 1.59
RABGGTA-203ENST00000543002 PLEKHG1Q9ULL1 1385 aa24.96■■□□□ 1.59
RABGGTA-203ENST00000543002 VGFO15240 615 aaPredicted RBP24.91■■□□□ 1.58
RABGGTA-203ENST00000543002 PPLO60437 1756 aa24.9■■□□□ 1.58
RABGGTA-203ENST00000543002 BCANQ96GW7 911 aa24.89■■□□□ 1.58
RABGGTA-203ENST00000543002 SIN3AQ96ST3 1273 aa24.88■■□□□ 1.57
RABGGTA-203ENST00000543002 SLC26A8Q96RN1 970 aa24.86■■□□□ 1.57
RABGGTA-203ENST00000543002 SENP3Q9H4L4 574 aaPredicted RBP24.86■■□□□ 1.57
RABGGTA-203ENST00000543002 IFT172Q9UG01 1749 aa24.86■■□□□ 1.57
RABGGTA-203ENST00000543002 ADAMTS13Q76LX8 1427 aa24.85■■□□□ 1.57
RABGGTA-203ENST00000543002 SETBP1Q9Y6X0 1596 aa24.84■■□□□ 1.57
RABGGTA-203ENST00000543002 TBX22Q9Y458 520 aa24.84■■□□□ 1.57
RABGGTA-203ENST00000543002 NEUROD1Q13562 356 aa24.83■■□□□ 1.56
RABGGTA-203ENST00000543002 ADGRF5Q8IZF2 1346 aa24.82■■□□□ 1.56
RABGGTA-203ENST00000543002 ZNF335Q9H4Z2 1342 aaPredicted RBP24.82■■□□□ 1.56
RABGGTA-203ENST00000543002 MYOM2P54296 1465 aa24.81■■□□□ 1.56
RABGGTA-203ENST00000543002 DIP2AQ14689 1571 aa24.81■■□□□ 1.56
RABGGTA-203ENST00000543002 NRXN3Q9Y4C0 1643 aa24.81■■□□□ 1.56
RABGGTA-203ENST00000543002 STAC3Q96MF2 364 aa24.81■■□□□ 1.56
RABGGTA-203ENST00000543002 DCAF11Q8TEB1 546 aa24.8■■□□□ 1.56
RABGGTA-203ENST00000543002 CLSPNQ9HAW4 1339 aa24.79■■□□□ 1.56
RABGGTA-203ENST00000543002 NRXN1Q9ULB1 1477 aa24.77■■□□□ 1.56
RABGGTA-203ENST00000543002 LTBP4Q8N2S1 1624 aa24.76■■□□□ 1.55
RABGGTA-203ENST00000543002 PIK3C2GO75747 1445 aa24.76■■□□□ 1.55
RABGGTA-203ENST00000543002 KDM2AQ9Y2K7 1162 aa24.76■■□□□ 1.55
RABGGTA-203ENST00000543002 PIK3R4Q99570 1358 aa24.75■■□□□ 1.55
RABGGTA-203ENST00000543002 ALKQ9UM73 1620 aa24.74■■□□□ 1.55
RABGGTA-203ENST00000543002 KCNA6P17658 529 aa24.74■■□□□ 1.55
RABGGTA-203ENST00000543002 CCER1Q8TC90 406 aaPredicted RBP24.74■■□□□ 1.55
RABGGTA-203ENST00000543002 L3MBTL2Q969R5 705 aa24.74■■□□□ 1.55
RABGGTA-203ENST00000543002 METP08581 1390 aa24.72■■□□□ 1.55
RABGGTA-203ENST00000543002 CPS1P31327 1500 aa24.71■■□□□ 1.55
RABGGTA-203ENST00000543002 STRCP1A6NGW2 1772 aa24.7■■□□□ 1.55
RABGGTA-203ENST00000543002 SETD1AO15047 1707 aaKnown RBP24.69■■□□□ 1.54
RABGGTA-203ENST00000543002 NWD1Q149M9 1564 aa24.69■■□□□ 1.54
RABGGTA-203ENST00000543002 CHD2O14647 1828 aaKnown RBP24.69■■□□□ 1.54
RABGGTA-203ENST00000543002 C14orf93Q9H972 538 aaKnown RBP24.69■■□□□ 1.54
RABGGTA-203ENST00000543002 PTPRUQ92729 1446 aa24.68■■□□□ 1.54
RABGGTA-203ENST00000543002 TONSLQ96HA7 1378 aa24.67■■□□□ 1.54
RABGGTA-203ENST00000543002 CFAP70Q5T0N1 1121 aa24.66■■□□□ 1.54
RABGGTA-203ENST00000543002 CERKQ8TCT0 537 aa24.65■■□□□ 1.54
RABGGTA-203ENST00000543002 AMOTL2Q9Y2J4 779 aa24.65■■□□□ 1.54
RABGGTA-203ENST00000543002 NKTRP30414 1462 aaKnown RBP24.65■■□□□ 1.54
RABGGTA-203ENST00000543002 LAMC1P11047 1609 aa24.64■■□□□ 1.54
RABGGTA-203ENST00000543002 PRAG1Q86YV5 1406 aa24.63■■□□□ 1.53
RABGGTA-203ENST00000543002 LRRC7Q96NW7 1537 aa24.63■■□□□ 1.53
RABGGTA-203ENST00000543002 ASXL1Q8IXJ9 1541 aa24.61■■□□□ 1.53
RABGGTA-203ENST00000543002 XRN1Q8IZH2 1706 aaKnown RBP24.61■■□□□ 1.53
RABGGTA-203ENST00000543002 TMEM132EQ6IEE7 984 aa24.61■■□□□ 1.53
RABGGTA-203ENST00000543002 PROSER2Q86WR7 435 aaPredicted RBP24.61■■□□□ 1.53
RABGGTA-203ENST00000543002 IQSEC2Q5JU85 1478 aa24.59■■□□□ 1.53
RABGGTA-203ENST00000543002 TIMELESSQ9UNS1 1208 aa24.58■■□□□ 1.52
RABGGTA-203ENST00000543002 LRPPRCP42704 1394 aaKnown RBP24.57■■□□□ 1.52
RABGGTA-203ENST00000543002 TMEM94Q12767 1356 aa24.56■■□□□ 1.52
RABGGTA-203ENST00000543002 YTHDC2Q9H6S0 1430 aaKnown RBP24.56■■□□□ 1.52
RABGGTA-203ENST00000543002 ADGRB1O14514 1584 aa24.55■■□□□ 1.52
RABGGTA-203ENST00000543002 KIAA1210Q9ULL0 1709 aa24.55■■□□□ 1.52
RABGGTA-203ENST00000543002 ABCC11Q96J66 1382 aa24.55■■□□□ 1.52
RABGGTA-203ENST00000543002 PTCH1Q13635 1447 aa24.54■■□□□ 1.52
RABGGTA-203ENST00000543002 STK26Q9P289 416 aa24.54■■□□□ 1.52
RABGGTA-203ENST00000543002 TECPR2O15040 1411 aa24.53■■□□□ 1.52
RABGGTA-203ENST00000543002 RBM33Q96EV2 1170 aaKnown RBP24.53■■□□□ 1.52
RABGGTA-203ENST00000543002 NCOA3Q9Y6Q9 1424 aa24.52■■□□□ 1.52
RABGGTA-203ENST00000543002 NBPF8Q3BBV2 869 aa24.52■■□□□ 1.52
RABGGTA-203ENST00000543002 ROBO2Q9HCK4 1378 aa24.51■■□□□ 1.51
RABGGTA-203ENST00000543002 XIRP1Q702N8 1843 aaKnown RBP24.51■■□□□ 1.51
RABGGTA-203ENST00000543002 NBPF1Q3BBV0 1214 aa24.5■■□□□ 1.51
RABGGTA-203ENST00000543002 KNDC1Q76NI1 1749 aa24.5■■□□□ 1.51
RABGGTA-203ENST00000543002 SIRT1Q96EB6 747 aa24.48■■□□□ 1.51
RABGGTA-203ENST00000543002 TRPM1Q7Z4N2 1603 aa24.48■■□□□ 1.51
RABGGTA-203ENST00000543002 FAM135BQ49AJ0 1406 aa24.45■■□□□ 1.5
RABGGTA-203ENST00000543002 DLC1Q96QB1 1528 aa24.45■■□□□ 1.5
RABGGTA-203ENST00000543002 C14orf37Q86TY3 774 aa24.44■■□□□ 1.5
RABGGTA-203ENST00000543002 TRAK1Q9UPV9 953 aa24.44■■□□□ 1.5
RABGGTA-203ENST00000543002 MSH6P52701 1360 aa24.44■■□□□ 1.5
RABGGTA-203ENST00000543002 WAPLQ7Z5K2 1190 aa24.42■■□□□ 1.5
RABGGTA-203ENST00000543002 C19orf44Q9H6X5 657 aa24.42■■□□□ 1.5
RABGGTA-203ENST00000543002 ROCK2O75116 1388 aaKnown RBP24.42■■□□□ 1.5
RABGGTA-203ENST00000543002 RALGAPBQ86X10 1494 aa24.41■■□□□ 1.5
RABGGTA-203ENST00000543002 ADGRL3Q9HAR2 1447 aa24.41■■□□□ 1.5
RABGGTA-203ENST00000543002 GPRASP1Q5JY77 1395 aa24.4■■□□□ 1.5
RABGGTA-203ENST00000543002 PLEKHH1Q9ULM0 1364 aa24.4■■□□□ 1.5
RABGGTA-203ENST00000543002 UBAP1LF5GYI3 381 aa24.4■■□□□ 1.5
RABGGTA-203ENST00000543002 TOM1O60784 492 aa24.39■■□□□ 1.5
RABGGTA-203ENST00000543002 PRAM1Q96QH2 718 aa24.39■■□□□ 1.5
RABGGTA-203ENST00000543002 FBXO41Q8TF61 875 aa24.37■■□□□ 1.49
RABGGTA-203ENST00000543002 POGKQ9P215 609 aa24.37■■□□□ 1.49
RABGGTA-203ENST00000543002 NALCNQ8IZF0 1738 aa24.37■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms