RNA–Protein interactions for RNA: ENST00000542354.1

TRAV1-1-201, Transcript of T cell receptor alpha variable 1-1, humanhuman

APPRIS P1 BASIC

Gene TRAV1-1, Length 392 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1-201ENST00000542354 AXIN2Q9Y2T1 843 aa4.39□□□□□ -1.71
TRAV1-1-201ENST00000542354 PHLDB1Q86UU1 1377 aa4.39□□□□□ -1.71
TRAV1-1-201ENST00000542354 PBRM1Q86U86 1689 aa4.38□□□□□ -1.71
TRAV1-1-201ENST00000542354 NCOA1Q15788 1441 aa4.38□□□□□ -1.71
TRAV1-1-201ENST00000542354 RGL2O15211 777 aa4.38□□□□□ -1.71
TRAV1-1-201ENST00000542354 PTPREP23469 700 aa4.38□□□□□ -1.71
TRAV1-1-201ENST00000542354 SLC4A5Q9BY07 1137 aa4.38□□□□□ -1.71
TRAV1-1-201ENST00000542354 NCKAP5LQ9HCH0 1330 aa4.38□□□□□ -1.71
TRAV1-1-201ENST00000542354 FGD5Q6ZNL6 1462 aa4.37□□□□□ -1.71
TRAV1-1-201ENST00000542354 PKD2Q13563 968 aa4.37□□□□□ -1.71
TRAV1-1-201ENST00000542354 KCTD12Q96CX2 325 aaKnown RBP4.37□□□□□ -1.71
TRAV1-1-201ENST00000542354 KCNK17Q96T54 332 aa4.37□□□□□ -1.71
TRAV1-1-201ENST00000542354 FHAD1B1AJZ9 1412 aa4.37□□□□□ -1.71
TRAV1-1-201ENST00000542354 CEP350Q5VT06 3117 aa4.37□□□□□ -1.71
TRAV1-1-201ENST00000542354 KIAA0556O60303 1618 aa4.36□□□□□ -1.71
TRAV1-1-201ENST00000542354 NUTM2BA6NNL0 878 aaPredicted RBP4.36□□□□□ -1.71
TRAV1-1-201ENST00000542354 NUTM2EB1AL46 878 aaPredicted RBP4.36□□□□□ -1.71
TRAV1-1-201ENST00000542354 HRO43593 1189 aa4.36□□□□□ -1.71
TRAV1-1-201ENST00000542354 PDE4AP27815 886 aa4.36□□□□□ -1.71
TRAV1-1-201ENST00000542354 PRELPP51888 382 aa4.36□□□□□ -1.71
TRAV1-1-201ENST00000542354 NUTM2DQ5VT03 806 aaPredicted RBP4.36□□□□□ -1.71
TRAV1-1-201ENST00000542354 NUTM2AQ8IVF1 878 aaPredicted RBP4.36□□□□□ -1.71
TRAV1-1-201ENST00000542354 MRPL50Q8N5N7 158 aaKnown RBP4.36□□□□□ -1.71
TRAV1-1-201ENST00000542354 BCL2L12Q9HB09 334 aa4.36□□□□□ -1.71
TRAV1-1-201ENST00000542354 FANCAO15360 1455 aa4.36□□□□□ -1.71
TRAV1-1-201ENST00000542354 TTC37Q6PGP7 1564 aa4.36□□□□□ -1.71
TRAV1-1-201ENST00000542354 WIZO95785 1651 aa4.35□□□□□ -1.71
TRAV1-1-201ENST00000542354 NYAP1Q6ZVC0 841 aa4.35□□□□□ -1.71
TRAV1-1-201ENST00000542354 CCDC125Q86Z20 511 aa4.35□□□□□ -1.71
TRAV1-1-201ENST00000542354 ZNF454Q8N9F8 522 aa4.35□□□□□ -1.71
TRAV1-1-201ENST00000542354 ZNF784Q8NCA9 323 aaPredicted RBP4.35□□□□□ -1.71
TRAV1-1-201ENST00000542354 CHGAP10645 457 aaKnown RBP4.34□□□□□ -1.71
TRAV1-1-201ENST00000542354 PSEN2P49810 448 aa4.34□□□□□ -1.71
TRAV1-1-201ENST00000542354 DSG2Q14126 1118 aa4.34□□□□□ -1.71
TRAV1-1-201ENST00000542354 UHRF1BP1LA0JNW5 1464 aa4.34□□□□□ -1.71
TRAV1-1-201ENST00000542354 CDK12Q9NYV4 1490 aaPredicted RBP4.34□□□□□ -1.71
TRAV1-1-201ENST00000542354 CPS1P31327 1500 aa4.34□□□□□ -1.71
TRAV1-1-201ENST00000542354 CUL7Q14999 1698 aa4.34□□□□□ -1.71
TRAV1-1-201ENST00000542354 LRP5O75197 1615 aa4.33□□□□□ -1.72
TRAV1-1-201ENST00000542354 PPP1R15BQ5SWA1 713 aa4.33□□□□□ -1.72
TRAV1-1-201ENST00000542354 OXER1Q8TDS5 423 aa4.33□□□□□ -1.72
TRAV1-1-201ENST00000542354 WNT2BQ93097 391 aa4.33□□□□□ -1.72
TRAV1-1-201ENST00000542354 VPS9D1Q9Y2B5 631 aa4.33□□□□□ -1.72
TRAV1-1-201ENST00000542354 ADAMTS12P58397 1594 aa4.32□□□□□ -1.72
TRAV1-1-201ENST00000542354 CUX1P39880 1505 aa4.32□□□□□ -1.72
TRAV1-1-201ENST00000542354 WDR7Q9Y4E6 1490 aa4.32□□□□□ -1.72
TRAV1-1-201ENST00000542354 AKNAQ7Z591 1439 aa4.32□□□□□ -1.72
TRAV1-1-201ENST00000542354 UACAQ9BZF9 1416 aa4.32□□□□□ -1.72
TRAV1-1-201ENST00000542354 TNIKQ9UKE5 1360 aa4.32□□□□□ -1.72
TRAV1-1-201ENST00000542354 PPP1R37O75864 691 aa4.32□□□□□ -1.72
TRAV1-1-201ENST00000542354 PTPN5P54829 565 aa4.32□□□□□ -1.72
TRAV1-1-201ENST00000542354 MEX3CQ5U5Q3 659 aaKnown RBP4.32□□□□□ -1.72
TRAV1-1-201ENST00000542354 DMRTA1Q5VZB9 504 aa4.32□□□□□ -1.72
TRAV1-1-201ENST00000542354 POTEEQ6S8J3 1075 aa4.32□□□□□ -1.72
TRAV1-1-201ENST00000542354 ANKK1Q8NFD2 765 aa4.32□□□□□ -1.72
TRAV1-1-201ENST00000542354 FBXW7Q969H0 707 aa4.32□□□□□ -1.72
TRAV1-1-201ENST00000542354 ZDHHC16Q969W1 377 aa4.32□□□□□ -1.72
TRAV1-1-201ENST00000542354 IRX2Q9BZI1 471 aaPredicted RBP4.32□□□□□ -1.72
TRAV1-1-201ENST00000542354 FER1L4A9Z1Z3 1794 aa4.32□□□□□ -1.72
TRAV1-1-201ENST00000542354 KDM5BQ9UGL1 1544 aa4.31□□□□□ -1.72
TRAV1-1-201ENST00000542354 TRAPPC8Q9Y2L5 1435 aa4.31□□□□□ -1.72
TRAV1-1-201ENST00000542354 ATAD2Q6PL18 1390 aa4.31□□□□□ -1.72
TRAV1-1-201ENST00000542354 MAP3K9P80192 1104 aa4.31□□□□□ -1.72
TRAV1-1-201ENST00000542354 THSD4Q6ZMP0 1018 aa4.31□□□□□ -1.72
TRAV1-1-201ENST00000542354 CAMSAP1Q5T5Y3 1602 aa4.31□□□□□ -1.72
TRAV1-1-201ENST00000542354 LRRC7Q96NW7 1537 aa4.31□□□□□ -1.72
TRAV1-1-201ENST00000542354 FOSBP53539 338 aa4.3□□□□□ -1.72
TRAV1-1-201ENST00000542354 LAPTM4BQ86VI4 370 aa4.3□□□□□ -1.72
TRAV1-1-201ENST00000542354 DDX27Q96GQ7 796 aaKnown RBP4.3□□□□□ -1.72
TRAV1-1-201ENST00000542354 ESF1Q9H501 851 aaKnown RBP4.3□□□□□ -1.72
TRAV1-1-201ENST00000542354 ABCA5Q8WWZ7 1642 aa4.3□□□□□ -1.72
TRAV1-1-201ENST00000542354 SHANK2Q9UPX8 1470 aa4.3□□□□□ -1.72
TRAV1-1-201ENST00000542354 CARMIL2Q6F5E8 1435 aa4.29□□□□□ -1.72
TRAV1-1-201ENST00000542354 RAPGEF6Q8TEU7 1601 aa4.29□□□□□ -1.72
TRAV1-1-201ENST00000542354 ALKQ9UM73 1620 aa4.29□□□□□ -1.72
TRAV1-1-201ENST00000542354 A0A0G2JS52 829 aa4.29□□□□□ -1.72
TRAV1-1-201ENST00000542354 PPP1R3GB7ZBB8 358 aa4.29□□□□□ -1.72
TRAV1-1-201ENST00000542354 EVI5O60447 810 aa4.29□□□□□ -1.72
TRAV1-1-201ENST00000542354 HRCP23327 699 aa4.29□□□□□ -1.72
TRAV1-1-201ENST00000542354 LAPTM4AQ15012 233 aa4.29□□□□□ -1.72
TRAV1-1-201ENST00000542354 CRISPLD2Q9H0B8 497 aa4.29□□□□□ -1.72
TRAV1-1-201ENST00000542354 ABCA10Q8WWZ4 1543 aa4.29□□□□□ -1.72
TRAV1-1-201ENST00000542354 RBM6P78332 1123 aaKnown RBP4.28□□□□□ -1.72
TRAV1-1-201ENST00000542354 TNS4Q8IZW8 715 aa4.28□□□□□ -1.72
TRAV1-1-201ENST00000542354 ZBED2Q9BTP6 218 aa4.28□□□□□ -1.72
TRAV1-1-201ENST00000542354 ANO8Q9HCE9 1232 aaPredicted RBP4.28□□□□□ -1.72
TRAV1-1-201ENST00000542354 RABGEF1Q9UJ41 708 aa4.28□□□□□ -1.72
TRAV1-1-201ENST00000542354 RUSC2Q8N2Y8 1516 aa4.27□□□□□ -1.73
TRAV1-1-201ENST00000542354 ARHGEF40Q8TER5 1519 aa4.27□□□□□ -1.73
TRAV1-1-201ENST00000542354 ARHGEF12Q9NZN5 1544 aa4.27□□□□□ -1.73
TRAV1-1-201ENST00000542354 ONECUT3O60422 494 aaPredicted RBP4.27□□□□□ -1.73
TRAV1-1-201ENST00000542354 GIGYF1O75420 1035 aaPredicted RBP4.27□□□□□ -1.73
TRAV1-1-201ENST00000542354 NECTIN2Q92692 538 aa4.27□□□□□ -1.73
TRAV1-1-201ENST00000542354 EPAS1Q99814 870 aa4.27□□□□□ -1.73
TRAV1-1-201ENST00000542354 FAM135BQ49AJ0 1406 aa4.27□□□□□ -1.73
TRAV1-1-201ENST00000542354 TOP2AP11388 1531 aaKnown RBP4.26□□□□□ -1.73
TRAV1-1-201ENST00000542354 CCDC88BA6NC98 1476 aa4.26□□□□□ -1.73
TRAV1-1-201ENST00000542354 PLA2R1Q13018 1463 aa4.26□□□□□ -1.73
TRAV1-1-201ENST00000542354 NEO1Q92859 1461 aa4.26□□□□□ -1.73
TRAV1-1-201ENST00000542354 BHMG1C9JSJ3 638 aaPredicted RBP4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms