RNA–Protein interactions for RNA: ENST00000541817.5

CHFR-220, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-220ENST00000541817 RSPH4AQ5TD94 716 aa15.82■□□□□ 0.12
CHFR-220ENST00000541817 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.82■□□□□ 0.124e-7■□□□□ 9.3
CHFR-220ENST00000541817 AHDC1Q5TGY3 1603 aaPredicted RBP15.82■□□□□ 0.12
CHFR-220ENST00000541817 DIP2AQ14689 1571 aa15.81■□□□□ 0.12
CHFR-220ENST00000541817 EFCAB6Q5THR3 1501 aa15.81■□□□□ 0.12
CHFR-220ENST00000541817 EHBP1L1Q8N3D4 1523 aa15.8■□□□□ 0.12
CHFR-220ENST00000541817 CEP162Q5TB80 1403 aa15.79■□□□□ 0.12
CHFR-220ENST00000541817 CHD2O14647 1828 aaKnown RBP15.79■□□□□ 0.12
CHFR-220ENST00000541817 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.79■□□□□ 0.12
CHFR-220ENST00000541817 ATAD2Q6PL18 1390 aa15.78■□□□□ 0.12
CHFR-220ENST00000541817 BRINP3Q76B58 766 aa15.78■□□□□ 0.12
CHFR-220ENST00000541817 EIF2AK4Q9P2K8 1649 aaKnown RBP15.78■□□□□ 0.12
CHFR-220ENST00000541817 ARHGEF5Q12774 1597 aa15.78■□□□□ 0.12
CHFR-220ENST00000541817 MAST1Q9Y2H9 1570 aa15.78■□□□□ 0.12
CHFR-220ENST00000541817 ATF3P18847 181 aa15.77■□□□□ 0.12
CHFR-220ENST00000541817 DDX17Q92841 729 aaKnown RBP15.76■□□□□ 0.11
CHFR-220ENST00000541817 ADAMTS2O95450 1211 aa15.75■□□□□ 0.11
CHFR-220ENST00000541817 ARHGAP31Q2M1Z3 1444 aa15.75■□□□□ 0.11
CHFR-220ENST00000541817 FOXD1Q16676 465 aa15.74■□□□□ 0.11
CHFR-220ENST00000541817 CADPS2Q86UW7 1296 aa15.74■□□□□ 0.11
CHFR-220ENST00000541817 NGLY1Q96IV0 654 aa15.74■□□□□ 0.11
CHFR-220ENST00000541817 C19orf44Q9H6X5 657 aa15.72■□□□□ 0.11
CHFR-220ENST00000541817 PPP1R15AO75807 674 aaPredicted RBP15.7■□□□□ 0.1
CHFR-220ENST00000541817 MYO5BQ9ULV0 1848 aa15.7■□□□□ 0.1
CHFR-220ENST00000541817 RRP7BPQ9NSQ0 103 aa15.69■□□□□ 0.1
CHFR-220ENST00000541817 USP21Q9UK80 565 aa15.69■□□□□ 0.1
CHFR-220ENST00000541817 SETD5Q9C0A6 1442 aa15.68■□□□□ 0.1
CHFR-220ENST00000541817 ADGRB3O60242 1522 aa15.68■□□□□ 0.1
CHFR-220ENST00000541817 PNPLA6Q8IY17 1366 aa15.68■□□□□ 0.1
CHFR-220ENST00000541817 LRRC59Q96AG4 307 aaKnown RBP15.68■□□□□ 0.1
CHFR-220ENST00000541817 ASXL1Q8IXJ9 1541 aa15.68■□□□□ 0.1
CHFR-220ENST00000541817 PLEKHG1Q9ULL1 1385 aa15.67■□□□□ 0.1
CHFR-220ENST00000541817 EP400Q96L91 3159 aa15.67■□□□□ 0.1
CHFR-220ENST00000541817 DUOX2Q9NRD8 1548 aa15.67■□□□□ 0.1
CHFR-220ENST00000541817 NCOA3Q9Y6Q9 1424 aa15.67■□□□□ 0.1
CHFR-220ENST00000541817 DEFB132Q7Z7B7 95 aa15.66■□□□□ 0.1
CHFR-220ENST00000541817 TBX22Q9Y458 520 aa15.65■□□□□ 0.1
CHFR-220ENST00000541817 NHSL1Q5SYE7 1610 aa15.65■□□□□ 0.1
CHFR-220ENST00000541817 ZFYVE9O95405 1425 aa15.64■□□□□ 0.09
CHFR-220ENST00000541817 TRPC5Q9UL62 973 aaPredicted RBP15.64■□□□□ 0.09
CHFR-220ENST00000541817 RIMS2Q9UQ26 1411 aa15.64■□□□□ 0.09
CHFR-220ENST00000541817 KIF15Q9NS87 1388 aa15.63■□□□□ 0.09
CHFR-220ENST00000541817 KANK1Q14678 1352 aa15.62■□□□□ 0.09
CHFR-220ENST00000541817 PSDA5PKW4 1024 aaPredicted RBP15.62■□□□□ 0.09
CHFR-220ENST00000541817 CCDC125Q86Z20 511 aa15.62■□□□□ 0.09
CHFR-220ENST00000541817 AMOTL2Q9Y2J4 779 aa15.62■□□□□ 0.09
CHFR-220ENST00000541817 NOS1P29475 1434 aa15.61■□□□□ 0.09
CHFR-220ENST00000541817 CHGAP10645 457 aaKnown RBP15.61■□□□□ 0.09
CHFR-220ENST00000541817 GCC2Q8IWJ2 1684 aa15.6■□□□□ 0.09
CHFR-220ENST00000541817 MST1RQ04912 1400 aa15.6■□□□□ 0.09
CHFR-220ENST00000541817 ADAMTS13Q76LX8 1427 aa15.6■□□□□ 0.09
CHFR-220ENST00000541817 PTPRUQ92729 1446 aa15.6■□□□□ 0.09
CHFR-220ENST00000541817 LRP5O75197 1615 aa15.6■□□□□ 0.09
CHFR-220ENST00000541817 ATRNO75882 1429 aa15.59■□□□□ 0.09
CHFR-220ENST00000541817 SLC52A1Q9NWF4 448 aa15.58■□□□□ 0.08
CHFR-220ENST00000541817 ERBINQ96RT1 1412 aa15.57■□□□□ 0.08
CHFR-220ENST00000541817 HDGFP51858 240 aaKnown RBP15.56■□□□□ 0.08
CHFR-220ENST00000541817 FNBP4Q8N3X1 1017 aaPredicted RBP15.56■□□□□ 0.08
CHFR-220ENST00000541817 LMTK2Q8IWU2 1503 aa15.55■□□□□ 0.08
CHFR-220ENST00000541817 TMEM131LA2VDJ0 1609 aa15.54■□□□□ 0.08
CHFR-220ENST00000541817 CHIC2Q9UKJ5 165 aa15.54■□□□□ 0.08
CHFR-220ENST00000541817 BLMP54132 1417 aaPredicted RBP15.53■□□□□ 0.08
CHFR-220ENST00000541817 HRCP23327 699 aa15.53■□□□□ 0.08
CHFR-220ENST00000541817 MYOM3Q5VTT5 1437 aa15.52■□□□□ 0.08
CHFR-220ENST00000541817 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.52■□□□□ 0.08
CHFR-220ENST00000541817 GJD4Q96KN9 370 aaPredicted RBP15.52■□□□□ 0.08
CHFR-220ENST00000541817 ABCC5O15440 1437 aa15.51■□□□□ 0.07
CHFR-220ENST00000541817 DCCP43146 1447 aa15.51■□□□□ 0.07
CHFR-220ENST00000541817 YY1P25490 414 aa15.51■□□□□ 0.07
CHFR-220ENST00000541817 TRPM2O94759 1503 aa15.51■□□□□ 0.07
CHFR-220ENST00000541817 BCL9LQ86UU0 1499 aa15.51■□□□□ 0.07
CHFR-220ENST00000541817 PIK3R4Q99570 1358 aa15.5■□□□□ 0.07
CHFR-220ENST00000541817 BRWD3Q6RI45 1802 aa15.5■□□□□ 0.07
CHFR-220ENST00000541817 SF3B2Q13435 895 aaKnown RBP15.5■□□□□ 0.07
CHFR-220ENST00000541817 CROCC2H7BZ55 1655 aa15.5■□□□□ 0.07
CHFR-220ENST00000541817 KANK4Q5T7N3 995 aaPredicted RBP15.49■□□□□ 0.07
CHFR-220ENST00000541817 ORAI2Q96SN7 254 aa15.49■□□□□ 0.07
CHFR-220ENST00000541817 PTCH1Q13635 1447 aa15.48■□□□□ 0.07
CHFR-220ENST00000541817 C1orf167Q5SNV9 1468 aa15.46■□□□□ 0.06
CHFR-220ENST00000541817 NALCNQ8IZF0 1738 aa15.46■□□□□ 0.06
CHFR-220ENST00000541817 XRN1Q8IZH2 1706 aaKnown RBP15.46■□□□□ 0.06
CHFR-220ENST00000541817 SOS2Q07890 1332 aaPredicted RBP15.45■□□□□ 0.06
CHFR-220ENST00000541817 UNC13BO14795 1591 aa15.45■□□□□ 0.06
CHFR-220ENST00000541817 GLI3P10071 1580 aa15.45■□□□□ 0.06
CHFR-220ENST00000541817 METP08581 1390 aa15.43■□□□□ 0.06
CHFR-220ENST00000541817 RALGAPBQ86X10 1494 aa15.43■□□□□ 0.06
CHFR-220ENST00000541817 DAPK1P53355 1430 aa15.43■□□□□ 0.06
CHFR-220ENST00000541817 ADGRL3Q9HAR2 1447 aa15.43■□□□□ 0.06
CHFR-220ENST00000541817 XPCQ01831 940 aaPredicted RBP15.42■□□□□ 0.06
CHFR-220ENST00000541817 R3HDM1Q15032 1099 aaKnown RBP15.42■□□□□ 0.06
CHFR-220ENST00000541817 MARF1Q9Y4F3 1742 aaKnown RBP15.42■□□□□ 0.06
CHFR-220ENST00000541817 SEPT12Q8IYM1 358 aa15.41■□□□□ 0.06
CHFR-220ENST00000541817 NRXN3Q9Y4C0 1643 aa15.41■□□□□ 0.06
CHFR-220ENST00000541817 COL22A1Q8NFW1 1626 aaPredicted RBP15.4■□□□□ 0.06
CHFR-220ENST00000541817 MYOM2P54296 1465 aa15.4■□□□□ 0.06
CHFR-220ENST00000541817 RPRD2Q5VT52 1461 aaKnown RBP15.4■□□□□ 0.06
CHFR-220ENST00000541817 LAMC1P11047 1609 aa15.39■□□□□ 0.05
CHFR-220ENST00000541817 PTPN23Q9H3S7 1636 aa15.39■□□□□ 0.05
CHFR-220ENST00000541817 ANKRD30AQ9BXX3 1397 aa15.39■□□□□ 0.05
CHFR-220ENST00000541817 EN1Q05925 392 aaPredicted RBP15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 9419.4 ms