RNA–Protein interactions for RNA: ENST00000541304.5

CDKN3-206, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 2 BASIC

Gene CDKN3, Length 1,070 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-206ENST00000541304 FOSBP53539 338 aa8.96□□□□□ -0.98
CDKN3-206ENST00000541304 MAP3K9P80192 1104 aa8.96□□□□□ -0.98
CDKN3-206ENST00000541304 DMRTA1Q5VZB9 504 aa8.96□□□□□ -0.98
CDKN3-206ENST00000541304 EMILIN3Q9NT22 766 aa8.96□□□□□ -0.98
CDKN3-206ENST00000541304 ERCC6L2Q5T890 1561 aa8.95□□□□□ -0.98
CDKN3-206ENST00000541304 BCL2L12Q9HB09 334 aa8.95□□□□□ -0.98
CDKN3-206ENST00000541304 CFAP43Q8NDM7 1665 aa8.94□□□□□ -0.98
CDKN3-206ENST00000541304 P3H3Q8IVL6 736 aa8.94□□□□□ -0.98
CDKN3-206ENST00000541304 SPRYD3Q8NCJ5 442 aa8.94□□□□□ -0.98
CDKN3-206ENST00000541304 ANO8Q9HCE9 1232 aaPredicted RBP8.94□□□□□ -0.98
CDKN3-206ENST00000541304 NUP153P49790 1475 aaKnown RBP8.94□□□□□ -0.98
CDKN3-206ENST00000541304 CDK11AQ9UQ88 783 aaPredicted RBP8.93□□□□□ -0.98
CDKN3-206ENST00000541304 PLB1Q6P1J6 1458 aa8.93□□□□□ -0.98
CDKN3-206ENST00000541304 EPRSP07814 1512 aaKnown RBP8.93□□□□□ -0.98
CDKN3-206ENST00000541304 KDM5BQ9UGL1 1544 aa8.93□□□□□ -0.98
CDKN3-206ENST00000541304 TIAM1Q13009 1591 aa8.93□□□□□ -0.98
CDKN3-206ENST00000541304 CAMK2BQ13554 666 aa8.92□□□□□ -0.98
CDKN3-206ENST00000541304 EHBP1L1Q8N3D4 1523 aa8.91□□□□□ -0.98
CDKN3-206ENST00000541304 HRO43593 1189 aa8.91□□□□□ -0.98
CDKN3-206ENST00000541304 PTPREP23469 700 aa8.91□□□□□ -0.98
CDKN3-206ENST00000541304 ADCY10Q96PN6 1610 aa8.91□□□□□ -0.98
CDKN3-206ENST00000541304 ZDHHC16Q969W1 377 aa8.9□□□□□ -0.98
CDKN3-206ENST00000541304 MAPKBP1O60336 1514 aa8.89□□□□□ -0.99
CDKN3-206ENST00000541304 ATP10BO94823 1461 aa8.88□□□□□ -0.99
CDKN3-206ENST00000541304 LRRC9Q6ZRR7 1453 aa8.88□□□□□ -0.99
CDKN3-206ENST00000541304 MTUS2Q5JR59 1369 aa8.87□□□□□ -0.99
CDKN3-206ENST00000541304 PAXIP1Q6ZW49 1069 aaPredicted RBP8.87□□□□□ -0.99
CDKN3-206ENST00000541304 STAC3Q96MF2 364 aa8.87□□□□□ -0.99
CDKN3-206ENST00000541304 CFAP44Q96MT7 982 aa8.87□□□□□ -0.99
CDKN3-206ENST00000541304 SLC4A5Q9BY07 1137 aa8.87□□□□□ -0.99
CDKN3-206ENST00000541304 ADAM33Q9BZ11 813 aa8.87□□□□□ -0.99
CDKN3-206ENST00000541304 VPS9D1Q9Y2B5 631 aa8.87□□□□□ -0.99
CDKN3-206ENST00000541304 TROQ12816 1431 aaPredicted RBP8.87□□□□□ -0.99
CDKN3-206ENST00000541304 ZCCHC11Q5TAX3 1644 aaKnown RBP8.87□□□□□ -0.99
CDKN3-206ENST00000541304 DPYSL4O14531 572 aa8.86□□□□□ -0.99
CDKN3-206ENST00000541304 KIF14Q15058 1648 aa8.86□□□□□ -0.99
CDKN3-206ENST00000541304 CDK13Q14004 1512 aaKnown RBP8.85□□□□□ -0.99
CDKN3-206ENST00000541304 WDR7Q9Y4E6 1490 aa8.85□□□□□ -0.99
CDKN3-206ENST00000541304 PLEKHD1A6NEE1 506 aa8.85□□□□□ -0.99
CDKN3-206ENST00000541304 PHF14O94880 888 aa8.85□□□□□ -0.99
CDKN3-206ENST00000541304 FBXW7Q969H0 707 aa8.85□□□□□ -0.99
CDKN3-206ENST00000541304 PCDHGA10Q9Y5H3 936 aa8.85□□□□□ -0.99
CDKN3-206ENST00000541304 SUPT6HQ7KZ85 1726 aaKnown RBP8.85□□□□□ -0.99
CDKN3-206ENST00000541304 TTBK1Q5TCY1 1321 aaPredicted RBP8.84□□□□□ -0.99
CDKN3-206ENST00000541304 TYW1BQ6NUM6 668 aa8.84□□□□□ -0.99
CDKN3-206ENST00000541304 LRRIQ1Q96JM4 1722 aa8.84□□□□□ -0.99
CDKN3-206ENST00000541304 ZBED2Q9BTP6 218 aa8.84□□□□□ -0.99
CDKN3-206ENST00000541304 HCSTQ9UBK5 93 aa8.84□□□□□ -0.99
CDKN3-206ENST00000541304 ATP1B4Q9UN42 357 aaPredicted RBP8.84□□□□□ -0.99
CDKN3-206ENST00000541304 PPP1R3GB7ZBB8 358 aa8.83□□□□□ -1
CDKN3-206ENST00000541304 CYB5RLQ6IPT4 315 aa8.83□□□□□ -1
CDKN3-206ENST00000541304 ARAP3Q8WWN8 1544 aa8.82□□□□□ -1
CDKN3-206ENST00000541304 ASXL2Q76L83 1435 aa8.81□□□□□ -1
CDKN3-206ENST00000541304 KCTD12Q96CX2 325 aaKnown RBP8.81□□□□□ -1
CDKN3-206ENST00000541304 EPAS1Q99814 870 aa8.81□□□□□ -1
CDKN3-206ENST00000541304 ITSN2Q9NZM3 1697 aa8.81□□□□□ -1
CDKN3-206ENST00000541304 PDIA6Q15084 440 aa8.8□□□□□ -1
CDKN3-206ENST00000541304 NBPF3Q9H094 633 aa8.8□□□□□ -1
CDKN3-206ENST00000541304 NCOA2Q15596 1464 aa8.8□□□□□ -1
CDKN3-206ENST00000541304 MAGI3Q5TCQ9 1506 aa8.8□□□□□ -1
CDKN3-206ENST00000541304 MIA2Q96PC5 1412 aa8.8□□□□□ -1
CDKN3-206ENST00000541304 GLI2P10070 1586 aa8.79□□□□□ -1
CDKN3-206ENST00000541304 ABCA9Q8IUA7 1624 aa8.79□□□□□ -1
CDKN3-206ENST00000541304 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.78□□□□□ -1
CDKN3-206ENST00000541304 BHMG1C9JSJ3 638 aaPredicted RBP8.78□□□□□ -1
CDKN3-206ENST00000541304 E2F4Q16254 413 aa8.78□□□□□ -1
CDKN3-206ENST00000541304 MRPL50Q8N5N7 158 aaKnown RBP8.78□□□□□ -1
CDKN3-206ENST00000541304 WDR70Q9NW82 654 aa8.78□□□□□ -1
CDKN3-206ENST00000541304 MYOM3Q5VTT5 1437 aa8.78□□□□□ -1
CDKN3-206ENST00000541304 ABCC10Q5T3U5 1492 aa8.77□□□□□ -1
CDKN3-206ENST00000541304 CCNB3Q8WWL7 1395 aa8.77□□□□□ -1.01
CDKN3-206ENST00000541304 CFAP74Q9C0B2 1584 aa8.77□□□□□ -1.01
CDKN3-206ENST00000541304 GOLGA8CPA6NN73 597 aa8.76□□□□□ -1.01
CDKN3-206ENST00000541304 SPDYE16A6NNV3 312 aaPredicted RBP8.76□□□□□ -1.01
CDKN3-206ENST00000541304 KANK4Q5T7N3 995 aaPredicted RBP8.76□□□□□ -1.01
CDKN3-206ENST00000541304 DDX12PQ92771 950 aa8.76□□□□□ -1.01
CDKN3-206ENST00000541304 PLEKHH2Q8IVE3 1493 aa8.76□□□□□ -1.01
CDKN3-206ENST00000541304 PREX2Q70Z35 1606 aa8.76□□□□□ -1.01
CDKN3-206ENST00000541304 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.75□□□□□ -1.01
CDKN3-206ENST00000541304 PHLDB1Q86UU1 1377 aa8.75□□□□□ -1.01
CDKN3-206ENST00000541304 DIP2BQ9P265 1576 aa8.75□□□□□ -1.01
CDKN3-206ENST00000541304 RRBP1Q9P2E9 1410 aaKnown RBP8.75□□□□□ -1.01
CDKN3-206ENST00000541304 COL9A1P20849 921 aa8.75□□□□□ -1.01
CDKN3-206ENST00000541304 MYO5CQ9NQX4 1742 aa8.74□□□□□ -1.01
CDKN3-206ENST00000541304 FGD6Q6ZV73 1430 aa8.74□□□□□ -1.01
CDKN3-206ENST00000541304 ARID3CA6NKF2 412 aa8.74□□□□□ -1.01
CDKN3-206ENST00000541304 NBR1Q14596 966 aa8.74□□□□□ -1.01
CDKN3-206ENST00000541304 PROX2Q3B8N5 592 aa8.74□□□□□ -1.01
CDKN3-206ENST00000541304 PLA2G2EQ9NZK7 142 aa8.74□□□□□ -1.01
CDKN3-206ENST00000541304 RABGEF1Q9UJ41 708 aa8.74□□□□□ -1.01
CDKN3-206ENST00000541304 TEX14Q8IWB6 1497 aa8.74□□□□□ -1.01
CDKN3-206ENST00000541304 TTC37Q6PGP7 1564 aa8.73□□□□□ -1.01
CDKN3-206ENST00000541304 PLCH2O75038 1416 aa8.73□□□□□ -1.01
CDKN3-206ENST00000541304 TCOF1Q13428 1488 aaKnown RBP8.73□□□□□ -1.01
CDKN3-206ENST00000541304 EN1Q05925 392 aaPredicted RBP8.73□□□□□ -1.01
CDKN3-206ENST00000541304 C6orf132Q5T0Z8 1188 aa8.73□□□□□ -1.01
CDKN3-206ENST00000541304 THSD4Q6ZMP0 1018 aa8.73□□□□□ -1.01
CDKN3-206ENST00000541304 WNT2BQ93097 391 aa8.73□□□□□ -1.01
CDKN3-206ENST00000541304 ARIH1Q9Y4X5 557 aaPredicted RBP8.73□□□□□ -1.01
CDKN3-206ENST00000541304 GPATCH8Q9UKJ3 1502 aaKnown RBP8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms