RNA–Protein interactions for RNA: ENST00000540783.5

RAPGEF4-215, Transcript of Rap guanine nucleotide exchange factor 4, human

TSL 2 BASIC

Gene RAPGEF4, Length 3,974 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAPGEF4-215	ENST00000540783	IDI1	Q13907	227 aa		7.55	□□□□□ -1.2
RAPGEF4-215	ENST00000540783	NBPF8	Q3BBV2	869 aa		7.55	□□□□□ -1.2
RAPGEF4-215	ENST00000540783	CARD11	Q9BXL7	1154 aa		7.55	□□□□□ -1.2
RAPGEF4-215	ENST00000540783	PLXNC1	O60486	1568 aa		7.55	□□□□□ -1.2
RAPGEF4-215	ENST00000540783	PROSER2	Q86WR7	435 aa	Predicted RBP	7.55	□□□□□ -1.2
RAPGEF4-215	ENST00000540783	ADGB	Q8N7X0	1667 aa		7.55	□□□□□ -1.2
RAPGEF4-215	ENST00000540783	CCDC7	Q96M83	1385 aa		7.55	□□□□□ -1.2
RAPGEF4-215	ENST00000540783	NLRP1	Q9C000	1473 aa		7.55	□□□□□ -1.2
RAPGEF4-215	ENST00000540783	COL17A1	Q9UMD9	1497 aa	Predicted RBP	7.55	□□□□□ -1.2
RAPGEF4-215	ENST00000540783	ATF3	P18847	181 aa		7.54	□□□□□ -1.2
RAPGEF4-215	ENST00000540783	HAP1	P54257	671 aa	Predicted RBP	7.54	□□□□□ -1.2
RAPGEF4-215	ENST00000540783	SENP3	Q9H4L4	574 aa	Predicted RBP	7.54	□□□□□ -1.2
RAPGEF4-215	ENST00000540783	CDC42BPB	Q9Y5S2	1711 aa		7.54	□□□□□ -1.2
RAPGEF4-215	ENST00000540783	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	7.53	□□□□□ -1.2
RAPGEF4-215	ENST00000540783	STK26	Q9P289	416 aa		7.53	□□□□□ -1.2
RAPGEF4-215	ENST00000540783	KIF7	Q2M1P5	1343 aa		7.53	□□□□□ -1.2
RAPGEF4-215	ENST00000540783	SOCS7	O14512	581 aa		7.53	□□□□□ -1.2
RAPGEF4-215	ENST00000540783	DIP2C	Q9Y2E4	1556 aa		7.53	□□□□□ -1.2
RAPGEF4-215	ENST00000540783	ARHGAP31	Q2M1Z3	1444 aa		7.53	□□□□□ -1.2
RAPGEF4-215	ENST00000540783	NUDC	Q9Y266	331 aa		7.52	□□□□□ -1.2
RAPGEF4-215	ENST00000540783	LMTK3	Q96Q04	1460 aa		7.52	□□□□□ -1.21
RAPGEF4-215	ENST00000540783	PZP	P20742	1482 aa		7.52	□□□□□ -1.21
RAPGEF4-215	ENST00000540783	KIF13A	Q9H1H9	1805 aa		7.52	□□□□□ -1.21
RAPGEF4-215	ENST00000540783	NUTM2D	Q5VT03	806 aa	Predicted RBP	7.52	□□□□□ -1.21
RAPGEF4-215	ENST00000540783	RERE	Q9P2R6	1566 aa		7.51	□□□□□ -1.21
RAPGEF4-215	ENST00000540783	INO80	Q9ULG1	1556 aa	Predicted RBP	7.51	□□□□□ -1.21
RAPGEF4-215	ENST00000540783	EIF2AK4	Q9P2K8	1649 aa	Known RBP	7.51	□□□□□ -1.21
RAPGEF4-215	ENST00000540783	NEFM	P07197	916 aa		7.51	□□□□□ -1.21
RAPGEF4-215	ENST00000540783	HSPA2	P54652	639 aa		7.51	□□□□□ -1.21
RAPGEF4-215	ENST00000540783	SKAP1	Q86WV1	359 aa		7.51	□□□□□ -1.21
RAPGEF4-215	ENST00000540783	PTPRM	P28827	1452 aa		7.51	□□□□□ -1.21
RAPGEF4-215	ENST00000540783	ROCK2	O75116	1388 aa	Known RBP	7.5	□□□□□ -1.21
RAPGEF4-215	ENST00000540783	TMF1	P82094	1093 aa		7.5	□□□□□ -1.21
RAPGEF4-215	ENST00000540783	RIMS2	Q9UQ26	1411 aa		7.5	□□□□□ -1.21
RAPGEF4-215	ENST00000540783	SRPK2	P78362	688 aa	Known RBP	7.5	□□□□□ -1.21
RAPGEF4-215	ENST00000540783	EXOC6	Q8TAG9	804 aa		7.5	□□□□□ -1.21
RAPGEF4-215	ENST00000540783	TOM1	O60784	492 aa		7.49	□□□□□ -1.21
RAPGEF4-215	ENST00000540783	SLC26A8	Q96RN1	970 aa		7.49	□□□□□ -1.21
RAPGEF4-215	ENST00000540783	TBX22	Q9Y458	520 aa		7.49	□□□□□ -1.21
RAPGEF4-215	ENST00000540783	TMC1	Q8TDI8	760 aa		7.49	□□□□□ -1.21
RAPGEF4-215	ENST00000540783	ABCC3	O15438	1527 aa		7.48	□□□□□ -1.21
RAPGEF4-215	ENST00000540783	A2ML1	A8K2U0	1454 aa		7.48	□□□□□ -1.21
RAPGEF4-215	ENST00000540783	ERVK-7	P63135	1459 aa		7.48	□□□□□ -1.21
RAPGEF4-215	ENST00000540783	SMG6	Q86US8	1419 aa	Known RBP	7.48	□□□□□ -1.21
RAPGEF4-215	ENST00000540783	TMEM2	Q9UHN6	1383 aa		7.48	□□□□□ -1.21
RAPGEF4-215	ENST00000540783	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	7.48	□□□□□ -1.21
RAPGEF4-215	ENST00000540783	ABCA6	Q8N139	1617 aa		7.47	□□□□□ -1.21
RAPGEF4-215	ENST00000540783	LRRIQ1	Q96JM4	1722 aa		7.47	□□□□□ -1.21
RAPGEF4-215	ENST00000540783	NCKAP5L	Q9HCH0	1330 aa		7.47	□□□□□ -1.21
RAPGEF4-215	ENST00000540783	PDE4A	P27815	886 aa		7.47	□□□□□ -1.21
RAPGEF4-215	ENST00000540783	CADPS2	Q86UW7	1296 aa		7.47	□□□□□ -1.21
RAPGEF4-215	ENST00000540783	TRAK1	Q9UPV9	953 aa		7.47	□□□□□ -1.21
RAPGEF4-215	ENST00000540783	EVC2	Q86UK5	1308 aa		7.47	□□□□□ -1.21
RAPGEF4-215	ENST00000540783	RICTOR	Q6R327	1708 aa		7.47	□□□□□ -1.21
RAPGEF4-215	ENST00000540783	KDM4F	A0A1W2PPD8	638 aa		7.46	□□□□□ -1.21
RAPGEF4-215	ENST00000540783	SLC4A3	P48751	1232 aa		7.46	□□□□□ -1.21
RAPGEF4-215	ENST00000540783	LMOD2	Q6P5Q4	547 aa		7.46	□□□□□ -1.22
RAPGEF4-215	ENST00000540783	NGDN	Q8NEJ9	315 aa	Known RBP	7.46	□□□□□ -1.22
RAPGEF4-215	ENST00000540783	MSH6	P52701	1360 aa		7.46	□□□□□ -1.22
RAPGEF4-215	ENST00000540783	KIDINS220	Q9ULH0	1771 aa		7.46	□□□□□ -1.22
RAPGEF4-215	ENST00000540783	LMTK2	Q8IWU2	1503 aa		7.46	□□□□□ -1.22
RAPGEF4-215	ENST00000540783	UGGT1	Q9NYU2	1555 aa		7.45	□□□□□ -1.22
RAPGEF4-215	ENST00000540783	SAFB2	Q14151	953 aa	Known RBP eCLIP	7.45	□□□□□ -1.22
RAPGEF4-215	ENST00000540783	PNISR	Q8TF01	805 aa	Known RBP	7.45	□□□□□ -1.22
RAPGEF4-215	ENST00000540783	TERF2IP	Q9NYB0	399 aa		7.45	□□□□□ -1.22
RAPGEF4-215	ENST00000540783	RNF123	Q5XPI4	1314 aa		7.45	□□□□□ -1.22
RAPGEF4-215	ENST00000540783	KCNA6	P17658	529 aa		7.45	□□□□□ -1.22
RAPGEF4-215	ENST00000540783	BRPF3	Q9ULD4	1205 aa		7.45	□□□□□ -1.22
RAPGEF4-215	ENST00000540783	PLIN1	O60240	522 aa		7.45	□□□□□ -1.22
RAPGEF4-215	ENST00000540783	CENPJ	Q9HC77	1338 aa	Predicted RBP	7.45	□□□□□ -1.22
RAPGEF4-215	ENST00000540783	NPHP4	O75161	1426 aa	Predicted RBP	7.45	□□□□□ -1.22
RAPGEF4-215	ENST00000540783	PRDM15	P57071	1507 aa	Predicted RBP	7.45	□□□□□ -1.22
RAPGEF4-215	ENST00000540783	EFCAB6	Q5THR3	1501 aa		7.45	□□□□□ -1.22
RAPGEF4-215	ENST00000540783	PSME1	Q06323	249 aa		7.44	□□□□□ -1.22
RAPGEF4-215	ENST00000540783	AMOTL2	Q9Y2J4	779 aa		7.44	□□□□□ -1.22
RAPGEF4-215	ENST00000540783	ZC3H13	Q5T200	1668 aa	Known RBP	7.44	□□□□□ -1.22
RAPGEF4-215	ENST00000540783	SCAF11	Q99590	1463 aa	Known RBP	7.44	□□□□□ -1.22
RAPGEF4-215	ENST00000540783	RRP1	P56182	461 aa	Known RBP	7.44	□□□□□ -1.22
RAPGEF4-215	ENST00000540783	UBAP1L	F5GYI3	381 aa		7.44	□□□□□ -1.22
RAPGEF4-215	ENST00000540783	GCC2	Q8IWJ2	1684 aa		7.43	□□□□□ -1.22
RAPGEF4-215	ENST00000540783	CROCC2	H7BZ55	1655 aa		7.43	□□□□□ -1.22
RAPGEF4-215	ENST00000540783	CFAP70	Q5T0N1	1121 aa		7.43	□□□□□ -1.22
RAPGEF4-215	ENST00000540783	PIK3R4	Q99570	1358 aa		7.43	□□□□□ -1.22
RAPGEF4-215	ENST00000540783	RCAN3	Q9UKA8	241 aa		7.43	□□□□□ -1.22
RAPGEF4-215	ENST00000540783	NOS1	P29475	1434 aa		7.43	□□□□□ -1.22
RAPGEF4-215	ENST00000540783	TET3	O43151	1660 aa		7.43	□□□□□ -1.22
RAPGEF4-215	ENST00000540783	FRMPD1	Q5SYB0	1578 aa		7.43	□□□□□ -1.22
RAPGEF4-215	ENST00000540783	CDCA7L	Q96GN5	454 aa		7.43	□□□□□ -1.22
RAPGEF4-215	ENST00000540783	BACH2	Q9BYV9	841 aa		7.43	□□□□□ -1.22
RAPGEF4-215	ENST00000540783	GPRASP1	Q5JY77	1395 aa		7.42	□□□□□ -1.22
RAPGEF4-215	ENST00000540783	PLEKHG1	Q9ULL1	1385 aa		7.42	□□□□□ -1.22
RAPGEF4-215	ENST00000540783	PPRC1	Q5VV67	1664 aa	Known RBP	7.42	□□□□□ -1.22
RAPGEF4-215	ENST00000540783	RIMS1	Q86UR5	1692 aa	Known RBP	7.42	□□□□□ -1.22
RAPGEF4-215	ENST00000540783	TCERG1	O14776	1098 aa	Known RBP	7.42	□□□□□ -1.22
RAPGEF4-215	ENST00000540783	LRPPRC	P42704	1394 aa	Known RBP	7.42	□□□□□ -1.22
RAPGEF4-215	ENST00000540783	EIF5B	O60841	1220 aa	Known RBP	7.42	□□□□□ -1.22
RAPGEF4-215	ENST00000540783	C14orf93	Q9H972	538 aa	Known RBP	7.42	□□□□□ -1.22
RAPGEF4-215	ENST00000540783	SPATA31E1	Q6ZUB1	1445 aa		7.42	□□□□□ -1.22
RAPGEF4-215	ENST00000540783	SETD1B	Q9UPS6	1966 aa	Known RBP	7.42	□□□□□ -1.22
RAPGEF4-215	ENST00000540783	MINK1	Q8N4C8	1332 aa	Predicted RBP	7.41	□□□□□ -1.22

Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms