RNA–Protein interactions for RNA: ENST00000540763.5

DDX55-207, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-207ENST00000540763 NCKAP5LQ9HCH0 1330 aa28.56■■■□□ 2.16
DDX55-207ENST00000540763 RIMS2Q9UQ26 1411 aa28.55■■■□□ 2.16
DDX55-207ENST00000540763 EID1Q9Y6B2 187 aa28.55■■■□□ 2.16
DDX55-207ENST00000540763 CHGAP10645 457 aaKnown RBP28.54■■■□□ 2.16
DDX55-207ENST00000540763 NPHP4O75161 1426 aaPredicted RBP28.53■■■□□ 2.16
DDX55-207ENST00000540763 HDGFP51858 240 aaKnown RBP28.53■■■□□ 2.16
DDX55-207ENST00000540763 NEXMIFQ5QGS0 1516 aa28.53■■■□□ 2.16
DDX55-207ENST00000540763 PPLO60437 1756 aa28.52■■■□□ 2.16
DDX55-207ENST00000540763 IFT172Q9UG01 1749 aa28.52■■■□□ 2.16
DDX55-207ENST00000540763 SPATA31E1Q6ZUB1 1445 aa28.52■■■□□ 2.16
DDX55-207ENST00000540763 TXNDC2Q86VQ3 553 aa28.51■■■□□ 2.15
DDX55-207ENST00000540763 PCGF6Q9BYE7 350 aa28.51■■■□□ 2.15
DDX55-207ENST00000540763 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.5■■■□□ 2.15
DDX55-207ENST00000540763 DHX57Q6P158 1386 aaKnown RBP28.5■■■□□ 2.15
DDX55-207ENST00000540763 LTKP29376 864 aa28.49■■■□□ 2.15
DDX55-207ENST00000540763 RPGRIP1LQ68CZ1 1315 aa28.46■■■□□ 2.15
DDX55-207ENST00000540763 PLEKHG1Q9ULL1 1385 aa28.46■■■□□ 2.15
DDX55-207ENST00000540763 ZNF335Q9H4Z2 1342 aaPredicted RBP28.44■■■□□ 2.14
DDX55-207ENST00000540763 DIP2AQ14689 1571 aa28.43■■■□□ 2.14
DDX55-207ENST00000540763 DISP3Q9P2K9 1392 aa28.43■■■□□ 2.14
DDX55-207ENST00000540763 ZNF326Q5BKZ1 582 aaKnown RBP28.43■■■□□ 2.14
DDX55-207ENST00000540763 SETBP1Q9Y6X0 1596 aa28.41■■■□□ 2.14
DDX55-207ENST00000540763 PPP1R15AO75807 674 aaPredicted RBP28.4■■■□□ 2.14
DDX55-207ENST00000540763 NRXN3Q9Y4C0 1643 aa28.39■■■□□ 2.13
DDX55-207ENST00000540763 VGFO15240 615 aaPredicted RBP28.34■■■□□ 2.13
DDX55-207ENST00000540763 MYOM2P54296 1465 aa28.34■■■□□ 2.13
DDX55-207ENST00000540763 ADAMTS13Q76LX8 1427 aa28.32■■■□□ 2.12
DDX55-207ENST00000540763 SETD1AO15047 1707 aaKnown RBP28.3■■■□□ 2.12
DDX55-207ENST00000540763 UBAP1LF5GYI3 381 aa28.3■■■□□ 2.12
DDX55-207ENST00000540763 RGL3Q3MIN7 710 aa28.3■■■□□ 2.12
DDX55-207ENST00000540763 CHD2O14647 1828 aaKnown RBP28.29■■■□□ 2.12
DDX55-207ENST00000540763 NWD1Q149M9 1564 aa28.29■■■□□ 2.12
DDX55-207ENST00000540763 NUTM2DQ5VT03 806 aaPredicted RBP28.29■■■□□ 2.12
DDX55-207ENST00000540763 STRCP1A6NGW2 1772 aa28.29■■■□□ 2.12
DDX55-207ENST00000540763 CPS1P31327 1500 aa28.28■■■□□ 2.12
DDX55-207ENST00000540763 NRXN1Q9ULB1 1477 aa28.28■■■□□ 2.12
DDX55-207ENST00000540763 STAC3Q96MF2 364 aa28.27■■■□□ 2.12
DDX55-207ENST00000540763 TBX22Q9Y458 520 aa28.27■■■□□ 2.12
DDX55-207ENST00000540763 PIK3R4Q99570 1358 aa28.26■■■□□ 2.12
DDX55-207ENST00000540763 LAMC1P11047 1609 aa28.26■■■□□ 2.11
DDX55-207ENST00000540763 ILDR2Q71H61 639 aa28.26■■■□□ 2.11
DDX55-207ENST00000540763 BCANQ96GW7 911 aa28.24■■■□□ 2.11
DDX55-207ENST00000540763 ALKQ9UM73 1620 aa28.24■■■□□ 2.11
DDX55-207ENST00000540763 PIK3C2GO75747 1445 aa28.24■■■□□ 2.11
DDX55-207ENST00000540763 SLC26A8Q96RN1 970 aa28.23■■■□□ 2.11
DDX55-207ENST00000540763 CLSPNQ9HAW4 1339 aa28.21■■■□□ 2.11
DDX55-207ENST00000540763 NKTRP30414 1462 aaKnown RBP28.2■■■□□ 2.1
DDX55-207ENST00000540763 ADGRF5Q8IZF2 1346 aa28.19■■■□□ 2.1
DDX55-207ENST00000540763 XRN1Q8IZH2 1706 aaKnown RBP28.18■■■□□ 2.1
DDX55-207ENST00000540763 SIN3AQ96ST3 1273 aa28.16■■■□□ 2.1
DDX55-207ENST00000540763 KCNA6P17658 529 aa28.15■■■□□ 2.1
DDX55-207ENST00000540763 SOCS7O14512 581 aa28.14■■■□□ 2.1
DDX55-207ENST00000540763 DCAF11Q8TEB1 546 aa28.14■■■□□ 2.1
DDX55-207ENST00000540763 KIAA1210Q9ULL0 1709 aa28.14■■■□□ 2.1
DDX55-207ENST00000540763 PRAG1Q86YV5 1406 aa28.13■■■□□ 2.09
DDX55-207ENST00000540763 XIRP1Q702N8 1843 aaKnown RBP28.11■■■□□ 2.09
DDX55-207ENST00000540763 SENP3Q9H4L4 574 aaPredicted RBP28.11■■■□□ 2.09
DDX55-207ENST00000540763 LRRC7Q96NW7 1537 aa28.11■■■□□ 2.09
DDX55-207ENST00000540763 METP08581 1390 aa28.11■■■□□ 2.09
DDX55-207ENST00000540763 KNDC1Q76NI1 1749 aa28.1■■■□□ 2.09
DDX55-207ENST00000540763 PTPRUQ92729 1446 aa28.09■■■□□ 2.09
DDX55-207ENST00000540763 ASXL1Q8IXJ9 1541 aa28.09■■■□□ 2.09
DDX55-207ENST00000540763 TOM1O60784 492 aa28.09■■■□□ 2.09
DDX55-207ENST00000540763 NEUROD1Q13562 356 aa28.09■■■□□ 2.09
DDX55-207ENST00000540763 SCAF1Q9H7N4 1312 aaKnown RBP28.09■■■□□ 2.09
DDX55-207ENST00000540763 C14orf93Q9H972 538 aaKnown RBP28.07■■■□□ 2.08
DDX55-207ENST00000540763 PIP4K2BP78356 416 aa28.05■■■□□ 2.08
DDX55-207ENST00000540763 L3MBTL2Q969R5 705 aa28.05■■■□□ 2.08
DDX55-207ENST00000540763 KDM2AQ9Y2K7 1162 aa28.05■■■□□ 2.08
DDX55-207ENST00000540763 TONSLQ96HA7 1378 aa28.04■■■□□ 2.08
DDX55-207ENST00000540763 PTCH1Q13635 1447 aa28.03■■■□□ 2.08
DDX55-207ENST00000540763 ADGRB1O14514 1584 aa28.03■■■□□ 2.08
DDX55-207ENST00000540763 NCOA3Q9Y6Q9 1424 aa28.02■■■□□ 2.08
DDX55-207ENST00000540763 AMOTL2Q9Y2J4 779 aa28.02■■■□□ 2.08
DDX55-207ENST00000540763 TECPR2O15040 1411 aa28.01■■■□□ 2.08
DDX55-207ENST00000540763 HSPA1LP34931 641 aa28■■■□□ 2.07
DDX55-207ENST00000540763 CCER1Q8TC90 406 aaPredicted RBP28■■■□□ 2.07
DDX55-207ENST00000540763 TRPM1Q7Z4N2 1603 aa27.99■■■□□ 2.07
DDX55-207ENST00000540763 LRPPRCP42704 1394 aaKnown RBP27.99■■■□□ 2.07
DDX55-207ENST00000540763 CFAP70Q5T0N1 1121 aa27.98■■■□□ 2.07
DDX55-207ENST00000540763 YTHDC2Q9H6S0 1430 aaKnown RBP27.97■■■□□ 2.07
DDX55-207ENST00000540763 TMEM94Q12767 1356 aa27.97■■■□□ 2.07
DDX55-207ENST00000540763 PROSER2Q86WR7 435 aaPredicted RBP27.96■■■□□ 2.07
DDX55-207ENST00000540763 ABCC11Q96J66 1382 aa27.96■■■□□ 2.07
DDX55-207ENST00000540763 TIMELESSQ9UNS1 1208 aa27.95■■■□□ 2.06
DDX55-207ENST00000540763 DLC1Q96QB1 1528 aa27.94■■■□□ 2.06
DDX55-207ENST00000540763 MED1Q15648 1581 aaPredicted RBP27.92■■■□□ 2.06
DDX55-207ENST00000540763 NALCNQ8IZF0 1738 aa27.91■■■□□ 2.06
DDX55-207ENST00000540763 TMEM132EQ6IEE7 984 aa27.9■■■□□ 2.06
DDX55-207ENST00000540763 FAM135BQ49AJ0 1406 aa27.9■■■□□ 2.06
DDX55-207ENST00000540763 ROBO2Q9HCK4 1378 aa27.89■■■□□ 2.06
DDX55-207ENST00000540763 ARHGEF28Q8N1W1 1705 aaKnown RBP27.89■■■□□ 2.05
DDX55-207ENST00000540763 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.89■■■□□ 2.05
DDX55-207ENST00000540763 SIRT1Q96EB6 747 aa27.88■■■□□ 2.05
DDX55-207ENST00000540763 DCCP43146 1447 aa27.87■■■□□ 2.05
DDX55-207ENST00000540763 MSH6P52701 1360 aa27.86■■■□□ 2.05
DDX55-207ENST00000540763 ADGRL3Q9HAR2 1447 aa27.86■■■□□ 2.05
DDX55-207ENST00000540763 RALGAPBQ86X10 1494 aa27.84■■■□□ 2.05
DDX55-207ENST00000540763 STK26Q9P289 416 aa27.82■■■□□ 2.04
DDX55-207ENST00000540763 GPRASP1Q5JY77 1395 aa27.81■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms