RNA–Protein interactions for RNA: ENST00000540357.5

DNMT1-203, Transcript of DNA methyltransferase 1, humanhuman

TSL 5 BASIC

Gene DNMT1, Length 4,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-203ENST00000540357 SCAPERQ9BY12 1400 aa16.21■□□□□ 0.19
DNMT1-203ENST00000540357 CTTNBP2Q8WZ74 1663 aa16.2■□□□□ 0.18
DNMT1-203ENST00000540357 BCAR3O75815 825 aa16.2■□□□□ 0.18
DNMT1-203ENST00000540357 RALGAPBQ86X10 1494 aa16.2■□□□□ 0.18
DNMT1-203ENST00000540357 DHX29Q7Z478 1369 aaKnown RBP16.2■□□□□ 0.18
DNMT1-203ENST00000540357 HDGFL2Q7Z4V5 671 aaPredicted RBP16.2■□□□□ 0.18
DNMT1-203ENST00000540357 ST18O60284 1047 aa16.2■□□□□ 0.18
DNMT1-203ENST00000540357 PDZRN3Q9UPQ7 1066 aa16.2■□□□□ 0.18
DNMT1-203ENST00000540357 PLCB2Q00722 1185 aa16.19■□□□□ 0.18
DNMT1-203ENST00000540357 C20orf194Q5TEA3 1177 aa16.19■□□□□ 0.18
DNMT1-203ENST00000540357 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.19■□□□□ 0.18
DNMT1-203ENST00000540357 TPM2P07951 284 aa16.18■□□□□ 0.18
DNMT1-203ENST00000540357 ESF1Q9H501 851 aaKnown RBP16.17■□□□□ 0.18
DNMT1-203ENST00000540357 ANKRD45Q5TZF3 282 aa16.16■□□□□ 0.18
DNMT1-203ENST00000540357 PTPRGP23470 1445 aa16.16■□□□□ 0.18
DNMT1-203ENST00000540357 TERF2IPQ9NYB0 399 aa16.16■□□□□ 0.18
DNMT1-203ENST00000540357 KIF3BO15066 747 aa16.16■□□□□ 0.18
DNMT1-203ENST00000540357 PHF14O94880 888 aa16.16■□□□□ 0.18
DNMT1-203ENST00000540357 MCM4P33991 863 aa16.15■□□□□ 0.18
DNMT1-203ENST00000540357 SKAP1Q86WV1 359 aa16.15■□□□□ 0.18
DNMT1-203ENST00000540357 NKTRP30414 1462 aaKnown RBP16.15■□□□□ 0.18
DNMT1-203ENST00000540357 KIF16BQ96L93 1317 aa16.15■□□□□ 0.18
DNMT1-203ENST00000540357 CSPP1Q1MSJ5 1256 aa16.14■□□□□ 0.17
DNMT1-203ENST00000540357 TPRNQ4KMQ1 711 aa16.14■□□□□ 0.17
DNMT1-203ENST00000540357 DUSP27Q5VZP5 1158 aa16.14■□□□□ 0.17
DNMT1-203ENST00000540357 LRPPRCP42704 1394 aaKnown RBP16.14■□□□□ 0.17
DNMT1-203ENST00000540357 PARD3Q8TEW0 1356 aa16.14■□□□□ 0.17
DNMT1-203ENST00000540357 UBE2Q2Q8WVN8 375 aa16.14■□□□□ 0.17
DNMT1-203ENST00000540357 NUCB2P80303 420 aa16.13■□□□□ 0.17
DNMT1-203ENST00000540357 SENP3Q9H4L4 574 aaPredicted RBP16.13■□□□□ 0.17
DNMT1-203ENST00000540357 TRAK1Q9UPV9 953 aa16.13■□□□□ 0.17
DNMT1-203ENST00000540357 GRPEL1Q9HAV7 217 aa16.12■□□□□ 0.17
DNMT1-203ENST00000540357 RRP9O43818 475 aaKnown RBP16.12■□□□□ 0.17
DNMT1-203ENST00000540357 SAFB2Q14151 953 aaKnown RBP eCLIP16.12■□□□□ 0.17
DNMT1-203ENST00000540357 KIAA0586Q9BVV6 1533 aa16.12■□□□□ 0.17
DNMT1-203ENST00000540357 LMOD3Q0VAK6 560 aa16.12■□□□□ 0.17
DNMT1-203ENST00000540357 WDR63Q8IWG1 891 aa16.12■□□□□ 0.17
DNMT1-203ENST00000540357 TCP11L2Q8N4U5 519 aa16.12■□□□□ 0.17
DNMT1-203ENST00000540357 HMMRO75330 724 aa16.11■□□□□ 0.17
DNMT1-203ENST00000540357 CCDC173Q0VFZ6 552 aa16.11■□□□□ 0.17
DNMT1-203ENST00000540357 NASPP49321 788 aaPredicted RBP16.11■□□□□ 0.17
DNMT1-203ENST00000540357 EVC2Q86UK5 1308 aa16.11■□□□□ 0.17
DNMT1-203ENST00000540357 CT47B1P0C2W7 299 aaPredicted RBP16.11■□□□□ 0.17
DNMT1-203ENST00000540357 MAP7D2Q96T17 732 aa16.11■□□□□ 0.17
DNMT1-203ENST00000540357 TEX14Q8IWB6 1497 aa16.1■□□□□ 0.17
DNMT1-203ENST00000540357 GOLGA6L6A8MZA4 724 aa16.1■□□□□ 0.17
DNMT1-203ENST00000540357 CIZ1Q9ULV3 898 aaPredicted RBP16.1■□□□□ 0.17
DNMT1-203ENST00000540357 APBB1O00213 710 aa16.09■□□□□ 0.17
DNMT1-203ENST00000540357 C8orf34Q49A92 452 aa16.09■□□□□ 0.17
DNMT1-203ENST00000540357 GCC2Q8IWJ2 1684 aa16.08■□□□□ 0.16
DNMT1-203ENST00000540357 GOLGA6L4A6NEF3 574 aa16.08■□□□□ 0.16
DNMT1-203ENST00000540357 ZRSR1Q15695 479 aaKnown RBP16.08■□□□□ 0.16
DNMT1-203ENST00000540357 PKNOX2Q96KN3 472 aa16.08■□□□□ 0.16
DNMT1-203ENST00000540357 SYNJ2O15056 1496 aa16.07■□□□□ 0.16
DNMT1-203ENST00000540357 MVPQ14764 893 aaKnown RBP16.07■□□□□ 0.16
DNMT1-203ENST00000540357 ESPNB1AK53 854 aa16.07■□□□□ 0.16
DNMT1-203ENST00000540357 MTERF4Q7Z6M4 381 aaKnown RBP16.07■□□□□ 0.16
DNMT1-203ENST00000540357 LNPKQ9C0E8 428 aa16.07■□□□□ 0.16
DNMT1-203ENST00000540357 STK26Q9P289 416 aa16.07■□□□□ 0.16
DNMT1-203ENST00000540357 ARHGEF12Q9NZN5 1544 aa16.06■□□□□ 0.16
DNMT1-203ENST00000540357 INSRP06213 1382 aa16.06■□□□□ 0.16
DNMT1-203ENST00000540357 REC8O95072 547 aa16.06■□□□□ 0.16
DNMT1-203ENST00000540357 SPATA31E1Q6ZUB1 1445 aa16.05■□□□□ 0.16
DNMT1-203ENST00000540357 ARHGAP5Q13017 1502 aa16.05■□□□□ 0.16
DNMT1-203ENST00000540357 WWC1Q8IX03 1113 aa16.05■□□□□ 0.16
DNMT1-203ENST00000540357 LAMC3Q9Y6N6 1575 aa16.05■□□□□ 0.16
DNMT1-203ENST00000540357 IFT140Q96RY7 1462 aa16.05■□□□□ 0.16
DNMT1-203ENST00000540357 CDC45O75419 566 aa16.05■□□□□ 0.16
DNMT1-203ENST00000540357 GGT6Q6P531 493 aa16.05■□□□□ 0.16
DNMT1-203ENST00000540357 ARID3AQ99856 593 aa16.05■□□□□ 0.16
DNMT1-203ENST00000540357 KIF14Q15058 1648 aa16.05■□□□□ 0.16
DNMT1-203ENST00000540357 RIPK4P57078 832 aa16.05■□□□□ 0.16
DNMT1-203ENST00000540357 DRC7Q8IY82 874 aa16.04■□□□□ 0.16
DNMT1-203ENST00000540357 FAM13BQ9NYF5 915 aa16.04■□□□□ 0.16
DNMT1-203ENST00000540357 CCDC141Q6ZP82 1450 aa16.04■□□□□ 0.16
DNMT1-203ENST00000540357 UHRF1BP1Q6BDS2 1440 aa16.04■□□□□ 0.16
DNMT1-203ENST00000540357 MCTP1Q6DN14 999 aa16.04■□□□□ 0.16
DNMT1-203ENST00000540357 API5Q9BZZ5 524 aaKnown RBP16.04■□□□□ 0.16
DNMT1-203ENST00000540357 KIAA1211Q6ZU35 1233 aa16.03■□□□□ 0.16
DNMT1-203ENST00000540357 TBC1D2Q9BYX2 928 aa16.03■□□□□ 0.16
DNMT1-203ENST00000540357 KIF21AQ7Z4S6 1674 aa16.03■□□□□ 0.16
DNMT1-203ENST00000540357 INTS3Q68E01 1043 aaKnown RBP16.03■□□□□ 0.16
DNMT1-203ENST00000540357 NRDCO43847 1150 aa16.02■□□□□ 0.16
DNMT1-203ENST00000540357 MTHFSP49914 203 aa16.02■□□□□ 0.16
DNMT1-203ENST00000540357 DISP3Q9P2K9 1392 aa16.02■□□□□ 0.16
DNMT1-203ENST00000540357 DIAPH1O60610 1272 aaKnown RBP16.02■□□□□ 0.16
DNMT1-203ENST00000540357 CCDC39Q9UFE4 941 aa16.02■□□□□ 0.16
DNMT1-203ENST00000540357 GCC1Q96CN9 775 aa16.02■□□□□ 0.15
DNMT1-203ENST00000540357 KCNJ4P48050 445 aa16.01■□□□□ 0.15
DNMT1-203ENST00000540357 OS9Q13438 667 aaPredicted RBP16.01■□□□□ 0.15
DNMT1-203ENST00000540357 MRC2Q9UBG0 1479 aa16.01■□□□□ 0.15
DNMT1-203ENST00000540357 ZBTB7CA1YPR0 619 aa16.01■□□□□ 0.15
DNMT1-203ENST00000540357 TBC1D32Q96NH3 1257 aa16.01■□□□□ 0.15
DNMT1-203ENST00000540357 RTF1Q92541 710 aaKnown RBP16.01■□□□□ 0.15
DNMT1-203ENST00000540357 DNMT1P26358 1616 aaKnown RBP16.01■□□□□ 0.15
DNMT1-203ENST00000540357 CDK11BP21127 795 aaKnown RBP16■□□□□ 0.15
DNMT1-203ENST00000540357 ITSN2Q9NZM3 1697 aa16■□□□□ 0.15
DNMT1-203ENST00000540357 URB2Q14146 1524 aaKnown RBP16■□□□□ 0.15
DNMT1-203ENST00000540357 RARSP54136 660 aaKnown RBP16■□□□□ 0.15
DNMT1-203ENST00000540357 MAGI1Q96QZ7 1491 aaPredicted RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms