RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 FBXO41Q8TF61 875 aa27.24■■□□□ 1.95
SNRPA1-203ENST00000540017 SENP3Q9H4L4 574 aaPredicted RBP27.23■■□□□ 1.95
SNRPA1-203ENST00000540017 NUTM2DQ5VT03 806 aaPredicted RBP27.22■■□□□ 1.95
SNRPA1-203ENST00000540017 ACIN1Q9UKV3 1341 aaKnown RBP27.2■■□□□ 1.95
SNRPA1-203ENST00000540017 STRCP1A6NGW2 1772 aa27.2■■□□□ 1.95
SNRPA1-203ENST00000540017 SLC26A8Q96RN1 970 aa27.19■■□□□ 1.94
SNRPA1-203ENST00000540017 PLEKHG1Q9ULL1 1385 aa27.18■■□□□ 1.94
SNRPA1-203ENST00000540017 PPP1R15AO75807 674 aaPredicted RBP27.17■■□□□ 1.94
SNRPA1-203ENST00000540017 HDGFP51858 240 aaKnown RBP27.17■■□□□ 1.94
SNRPA1-203ENST00000540017 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.17■■□□□ 1.94
SNRPA1-203ENST00000540017 CPS1P31327 1500 aa27.16■■□□□ 1.94
SNRPA1-203ENST00000540017 HRCP23327 699 aa27.15■■□□□ 1.94
SNRPA1-203ENST00000540017 ZNF326Q5BKZ1 582 aaKnown RBP27.15■■□□□ 1.94
SNRPA1-203ENST00000540017 KIF1BO60333 1816 aa27.15■■□□□ 1.94
SNRPA1-203ENST00000540017 IQSEC2Q5JU85 1478 aa27.14■■□□□ 1.94
SNRPA1-203ENST00000540017 BCANQ96GW7 911 aa27.14■■□□□ 1.94
SNRPA1-203ENST00000540017 NEXMIFQ5QGS0 1516 aa27.1■■□□□ 1.93
SNRPA1-203ENST00000540017 CCDC144AA2RUR9 1427 aa27.08■■□□□ 1.93
SNRPA1-203ENST00000540017 ADAMTS13Q76LX8 1427 aa27.08■■□□□ 1.93
SNRPA1-203ENST00000540017 LRRC7Q96NW7 1537 aa27.07■■□□□ 1.92
SNRPA1-203ENST00000540017 TBX22Q9Y458 520 aa27.05■■□□□ 1.92
SNRPA1-203ENST00000540017 KCNA6P17658 529 aa27.04■■□□□ 1.92
SNRPA1-203ENST00000540017 SPATA31E1Q6ZUB1 1445 aa27.03■■□□□ 1.92
SNRPA1-203ENST00000540017 NRXN3Q9Y4C0 1643 aa27.03■■□□□ 1.92
SNRPA1-203ENST00000540017 DIP2AQ14689 1571 aa27■■□□□ 1.91
SNRPA1-203ENST00000540017 NWD1Q149M9 1564 aa27■■□□□ 1.91
SNRPA1-203ENST00000540017 SETBP1Q9Y6X0 1596 aa27■■□□□ 1.91
SNRPA1-203ENST00000540017 ANKRD30BQ9BXX2 1392 aa26.99■■□□□ 1.91
SNRPA1-203ENST00000540017 RPGRIP1LQ68CZ1 1315 aa26.99■■□□□ 1.91
SNRPA1-203ENST00000540017 RGL3Q3MIN7 710 aa26.99■■□□□ 1.91
SNRPA1-203ENST00000540017 CHD2O14647 1828 aaKnown RBP26.99■■□□□ 1.91
SNRPA1-203ENST00000540017 UBAP1LF5GYI3 381 aa26.98■■□□□ 1.91
SNRPA1-203ENST00000540017 PPLO60437 1756 aa26.98■■□□□ 1.91
SNRPA1-203ENST00000540017 XIRP1Q702N8 1843 aaKnown RBP26.97■■□□□ 1.91
SNRPA1-203ENST00000540017 VGFO15240 615 aaPredicted RBP26.96■■□□□ 1.91
SNRPA1-203ENST00000540017 RBM33Q96EV2 1170 aaKnown RBP26.95■■□□□ 1.9
SNRPA1-203ENST00000540017 PTPRUQ92729 1446 aa26.94■■□□□ 1.9
SNRPA1-203ENST00000540017 NKTRP30414 1462 aaKnown RBP26.93■■□□□ 1.9
SNRPA1-203ENST00000540017 PROSER2Q86WR7 435 aaPredicted RBP26.93■■□□□ 1.9
SNRPA1-203ENST00000540017 TMEM94Q12767 1356 aa26.93■■□□□ 1.9
SNRPA1-203ENST00000540017 PIK3R4Q99570 1358 aa26.93■■□□□ 1.9
SNRPA1-203ENST00000540017 ALKQ9UM73 1620 aa26.93■■□□□ 1.9
SNRPA1-203ENST00000540017 METP08581 1390 aa26.92■■□□□ 1.9
SNRPA1-203ENST00000540017 TRIM26Q12899 539 aaPredicted RBP26.91■■□□□ 1.9
SNRPA1-203ENST00000540017 IFT172Q9UG01 1749 aa26.9■■□□□ 1.9
SNRPA1-203ENST00000540017 ADGRF5Q8IZF2 1346 aa26.9■■□□□ 1.9
SNRPA1-203ENST00000540017 AMOTL2Q9Y2J4 779 aa26.88■■□□□ 1.89
SNRPA1-203ENST00000540017 TOM1O60784 492 aa26.87■■□□□ 1.89
SNRPA1-203ENST00000540017 SETD1AO15047 1707 aaKnown RBP26.87■■□□□ 1.89
SNRPA1-203ENST00000540017 PIP4K2BP78356 416 aa26.84■■□□□ 1.89
SNRPA1-203ENST00000540017 XRN1Q8IZH2 1706 aaKnown RBP26.84■■□□□ 1.89
SNRPA1-203ENST00000540017 SCAF1Q9H7N4 1312 aaKnown RBP26.8■■□□□ 1.88
SNRPA1-203ENST00000540017 PIK3C2GO75747 1445 aa26.78■■□□□ 1.88
SNRPA1-203ENST00000540017 NRXN1Q9ULB1 1477 aa26.76■■□□□ 1.87
SNRPA1-203ENST00000540017 MYOM2P54296 1465 aa26.75■■□□□ 1.87
SNRPA1-203ENST00000540017 NCOA3Q9Y6Q9 1424 aa26.75■■□□□ 1.87
SNRPA1-203ENST00000540017 MSH6P52701 1360 aa26.74■■□□□ 1.87
SNRPA1-203ENST00000540017 DHX57Q6P158 1386 aaKnown RBP26.73■■□□□ 1.87
SNRPA1-203ENST00000540017 ASXL1Q8IXJ9 1541 aa26.71■■□□□ 1.87
SNRPA1-203ENST00000540017 C14orf37Q86TY3 774 aa26.71■■□□□ 1.87
SNRPA1-203ENST00000540017 ROBO2Q9HCK4 1378 aa26.71■■□□□ 1.87
SNRPA1-203ENST00000540017 DCAF11Q8TEB1 546 aa26.7■■□□□ 1.86
SNRPA1-203ENST00000540017 KDM2AQ9Y2K7 1162 aa26.7■■□□□ 1.86
SNRPA1-203ENST00000540017 HSPA1LP34931 641 aa26.69■■□□□ 1.86
SNRPA1-203ENST00000540017 TMEM132EQ6IEE7 984 aa26.69■■□□□ 1.86
SNRPA1-203ENST00000540017 C14orf93Q9H972 538 aaKnown RBP26.69■■□□□ 1.86
SNRPA1-203ENST00000540017 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.68■■□□□ 1.86
SNRPA1-203ENST00000540017 CFAP70Q5T0N1 1121 aa26.68■■□□□ 1.86
SNRPA1-203ENST00000540017 C19orf44Q9H6X5 657 aa26.68■■□□□ 1.86
SNRPA1-203ENST00000540017 PTCH1Q13635 1447 aa26.67■■□□□ 1.86
SNRPA1-203ENST00000540017 PRAG1Q86YV5 1406 aa26.67■■□□□ 1.86
SNRPA1-203ENST00000540017 SIN3AQ96ST3 1273 aa26.65■■□□□ 1.86
SNRPA1-203ENST00000540017 STK26Q9P289 416 aa26.65■■□□□ 1.86
SNRPA1-203ENST00000540017 SLAIN2Q9P270 581 aa26.64■■□□□ 1.86
SNRPA1-203ENST00000540017 FAM135BQ49AJ0 1406 aa26.64■■□□□ 1.85
SNRPA1-203ENST00000540017 LRPPRCP42704 1394 aaKnown RBP26.63■■□□□ 1.85
SNRPA1-203ENST00000540017 NALCNQ8IZF0 1738 aa26.62■■□□□ 1.85
SNRPA1-203ENST00000540017 ADGRL3Q9HAR2 1447 aa26.61■■□□□ 1.85
SNRPA1-203ENST00000540017 LAMC1P11047 1609 aa26.61■■□□□ 1.85
SNRPA1-203ENST00000540017 ROBO1Q9Y6N7 1651 aa26.6■■□□□ 1.85
SNRPA1-203ENST00000540017 TECPR2O15040 1411 aa26.6■■□□□ 1.85
SNRPA1-203ENST00000540017 YTHDC2Q9H6S0 1430 aaKnown RBP26.6■■□□□ 1.85
SNRPA1-203ENST00000540017 ATF3P18847 181 aa26.6■■□□□ 1.85
SNRPA1-203ENST00000540017 CADPS2Q86UW7 1296 aa26.6■■□□□ 1.85
SNRPA1-203ENST00000540017 STAC3Q96MF2 364 aa26.6■■□□□ 1.85
SNRPA1-203ENST00000540017 ABCC11Q96J66 1382 aa26.59■■□□□ 1.85
SNRPA1-203ENST00000540017 DCCP43146 1447 aa26.58■■□□□ 1.85
SNRPA1-203ENST00000540017 WAPLQ7Z5K2 1190 aa26.57■■□□□ 1.84
SNRPA1-203ENST00000540017 KNDC1Q76NI1 1749 aa26.56■■□□□ 1.84
SNRPA1-203ENST00000540017 ADGRB1O14514 1584 aa26.56■■□□□ 1.84
SNRPA1-203ENST00000540017 NEUROD1Q13562 356 aa26.55■■□□□ 1.84
SNRPA1-203ENST00000540017 PLEKHH1Q9ULM0 1364 aa26.55■■□□□ 1.84
SNRPA1-203ENST00000540017 MST1RQ04912 1400 aa26.53■■□□□ 1.84
SNRPA1-203ENST00000540017 L3MBTL2Q969R5 705 aa26.52■■□□□ 1.84
SNRPA1-203ENST00000540017 PCGF6Q9BYE7 350 aa26.52■■□□□ 1.84
SNRPA1-203ENST00000540017 SIRT1Q96EB6 747 aa26.49■■□□□ 1.83
SNRPA1-203ENST00000540017 BRINP3Q76B58 766 aa26.47■■□□□ 1.83
SNRPA1-203ENST00000540017 TRAK1Q9UPV9 953 aa26.45■■□□□ 1.82
SNRPA1-203ENST00000540017 DLC1Q96QB1 1528 aa26.44■■□□□ 1.82
SNRPA1-203ENST00000540017 PRAM1Q96QH2 718 aa26.44■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms