RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 CFAP70Q5T0N1 1121 aa31.05■■■□□ 2.56
HOMER3-204ENST00000539827 KIAA1210Q9ULL0 1709 aa31.04■■■□□ 2.56
HOMER3-204ENST00000539827 IQGAP1P46940 1657 aa31.03■■■□□ 2.56
HOMER3-204ENST00000539827 TESK2Q96S53 571 aa31.03■■■□□ 2.56
HOMER3-204ENST00000539827 PPP6R1Q9UPN7 881 aa31.03■■■□□ 2.56
HOMER3-204ENST00000539827 IDI1Q13907 227 aa31.02■■■□□ 2.56
HOMER3-204ENST00000539827 FBXO31Q5XUX0 539 aaPredicted RBP31.02■■■□□ 2.56
HOMER3-204ENST00000539827 PPLO60437 1756 aa31.02■■■□□ 2.56
HOMER3-204ENST00000539827 CLTCQ00610 1675 aaKnown RBP31.01■■■□□ 2.56
HOMER3-204ENST00000539827 NRXN1Q9ULB1 1477 aa31■■■□□ 2.55
HOMER3-204ENST00000539827 RPGRIP1LQ68CZ1 1315 aa30.99■■■□□ 2.55
HOMER3-204ENST00000539827 SCAF11Q99590 1463 aaKnown RBP30.99■■■□□ 2.55
HOMER3-204ENST00000539827 PRKRIP1Q9H875 184 aaPredicted RBP30.98■■■□□ 2.55
HOMER3-204ENST00000539827 SLC52A1Q9NWF4 448 aa30.98■■■□□ 2.55
HOMER3-204ENST00000539827 DISP3Q9P2K9 1392 aa30.97■■■□□ 2.55
HOMER3-204ENST00000539827 ERVK-7P63135 1459 aa30.95■■■□□ 2.54
HOMER3-204ENST00000539827 NUTM2DQ5VT03 806 aaPredicted RBP30.93■■■□□ 2.54
HOMER3-204ENST00000539827 TMF1P82094 1093 aa30.92■■■□□ 2.54
HOMER3-204ENST00000539827 CNGB1Q14028 1251 aaPredicted RBP30.9■■■□□ 2.54
HOMER3-204ENST00000539827 NEXMIFQ5QGS0 1516 aa30.9■■■□□ 2.54
HOMER3-204ENST00000539827 PIK3C2GO75747 1445 aa30.9■■■□□ 2.54
HOMER3-204ENST00000539827 SCAF1Q9H7N4 1312 aaKnown RBP30.89■■■□□ 2.53
HOMER3-204ENST00000539827 MYO5BQ9ULV0 1848 aa30.89■■■□□ 2.53
HOMER3-204ENST00000539827 EIF3AQ14152 1382 aaKnown RBP30.86■■■□□ 2.53
HOMER3-204ENST00000539827 C14orf93Q9H972 538 aaKnown RBP30.86■■■□□ 2.53
HOMER3-204ENST00000539827 TMEM131LA2VDJ0 1609 aa30.86■■■□□ 2.53
HOMER3-204ENST00000539827 ESF1Q9H501 851 aaKnown RBP30.86■■■□□ 2.53
HOMER3-204ENST00000539827 CCDC184Q52MB2 194 aa30.85■■■□□ 2.53
HOMER3-204ENST00000539827 VGFO15240 615 aaPredicted RBP30.85■■■□□ 2.53
HOMER3-204ENST00000539827 SETBP1Q9Y6X0 1596 aa30.82■■■□□ 2.52
HOMER3-204ENST00000539827 SPATA31D1Q6ZQQ2 1576 aa30.81■■■□□ 2.52
HOMER3-204ENST00000539827 ZMYM3Q14202 1370 aa30.79■■■□□ 2.52
HOMER3-204ENST00000539827 TMEM132EQ6IEE7 984 aa30.79■■■□□ 2.52
HOMER3-204ENST00000539827 STAG3Q9UJ98 1225 aa30.79■■■□□ 2.52
HOMER3-204ENST00000539827 SENP3Q9H4L4 574 aaPredicted RBP30.76■■■□□ 2.51
HOMER3-204ENST00000539827 ADGRB1O14514 1584 aa30.76■■■□□ 2.51
HOMER3-204ENST00000539827 MRS2Q9HD23 443 aa30.75■■■□□ 2.51
HOMER3-204ENST00000539827 TRAK1Q9UPV9 953 aa30.75■■■□□ 2.51
HOMER3-204ENST00000539827 ZFYVE9O95405 1425 aa30.75■■■□□ 2.51
HOMER3-204ENST00000539827 GTF3C3Q9Y5Q9 886 aa30.74■■■□□ 2.51
HOMER3-204ENST00000539827 PANK3Q9H999 370 aa30.72■■■□□ 2.51
HOMER3-204ENST00000539827 CDCA8Q53HL2 280 aa30.72■■■□□ 2.51
HOMER3-204ENST00000539827 MYO3AQ8NEV4 1616 aa30.7■■■□□ 2.5
HOMER3-204ENST00000539827 PER1O15534 1290 aaPredicted RBP30.69■■■□□ 2.5
HOMER3-204ENST00000539827 CENPJQ9HC77 1338 aaPredicted RBP30.68■■■□□ 2.5
HOMER3-204ENST00000539827 A2ML1A8K2U0 1454 aa30.68■■■□□ 2.5
HOMER3-204ENST00000539827 FAM9BQ8IZU0 186 aa30.65■■■□□ 2.5
HOMER3-204ENST00000539827 SLC24A1O60721 1099 aa30.64■■■□□ 2.5
HOMER3-204ENST00000539827 KDM5AP29375 1690 aaKnown RBP30.63■■■□□ 2.49
HOMER3-204ENST00000539827 RALBP1Q15311 655 aa30.62■■■□□ 2.49
HOMER3-204ENST00000539827 TNRQ92752 1358 aa30.62■■■□□ 2.49
HOMER3-204ENST00000539827 KTN1Q86UP2 1357 aaKnown RBP30.61■■■□□ 2.49
HOMER3-204ENST00000539827 QRICH2Q9H0J4 1663 aa30.6■■■□□ 2.49
HOMER3-204ENST00000539827 RIMS2Q9UQ26 1411 aa30.6■■■□□ 2.49
HOMER3-204ENST00000539827 SBNO2Q9Y2G9 1366 aa30.6■■■□□ 2.49
HOMER3-204ENST00000539827 ASXL1Q8IXJ9 1541 aa30.6■■■□□ 2.49
HOMER3-204ENST00000539827 HNRNPUQ00839 825 aaKnown RBP eCLIP30.59■■■□□ 2.49
HOMER3-204ENST00000539827 MYOM1P52179 1685 aa30.58■■■□□ 2.49
HOMER3-204ENST00000539827 MYBBP1AQ9BQG0 1328 aaKnown RBP30.57■■■□□ 2.48
HOMER3-204ENST00000539827 CC2D1BQ5T0F9 858 aaKnown RBP30.57■■■□□ 2.48
HOMER3-204ENST00000539827 STK26Q9P289 416 aa30.57■■■□□ 2.48
HOMER3-204ENST00000539827 ARHGEF28Q8N1W1 1705 aaKnown RBP30.56■■■□□ 2.48
HOMER3-204ENST00000539827 CEBPAP49715 358 aaPredicted RBP30.55■■■□□ 2.48
HOMER3-204ENST00000539827 PARD3Q8TEW0 1356 aa30.55■■■□□ 2.48
HOMER3-204ENST00000539827 ALKQ9UM73 1620 aa30.54■■■□□ 2.48
HOMER3-204ENST00000539827 TMC1Q8TDI8 760 aa30.51■■■□□ 2.47
HOMER3-204ENST00000539827 PLPPR3Q6T4P5 718 aa30.5■■■□□ 2.47
HOMER3-204ENST00000539827 KNSTRNQ9Y448 316 aa30.5■■■□□ 2.47
HOMER3-204ENST00000539827 YTHDC2Q9H6S0 1430 aaKnown RBP30.48■■■□□ 2.47
HOMER3-204ENST00000539827 SAFB2Q14151 953 aaKnown RBP eCLIP30.48■■■□□ 2.47
HOMER3-204ENST00000539827 FER1L4A9Z1Z3 1794 aa30.48■■■□□ 2.47
HOMER3-204ENST00000539827 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.47■■■□□ 2.47
HOMER3-204ENST00000539827 BRD4O60885 1362 aaPredicted RBP30.47■■■□□ 2.47
HOMER3-204ENST00000539827 C3P01024 1663 aa30.46■■■□□ 2.47
HOMER3-204ENST00000539827 UBR1Q8IWV7 1749 aa30.44■■■□□ 2.46
HOMER3-204ENST00000539827 PTPRMP28827 1452 aa30.44■■■□□ 2.46
HOMER3-204ENST00000539827 PNISRQ8TF01 805 aaKnown RBP30.43■■■□□ 2.46
HOMER3-204ENST00000539827 AMER1Q5JTC6 1135 aaPredicted RBP30.43■■■□□ 2.46
HOMER3-204ENST00000539827 NLRP13Q86W25 1043 aa30.43■■■□□ 2.46
HOMER3-204ENST00000539827 EVC2Q86UK5 1308 aa30.41■■■□□ 2.46
HOMER3-204ENST00000539827 TULP4Q9NRJ4 1543 aa30.41■■■□□ 2.46
HOMER3-204ENST00000539827 PRAM1Q96QH2 718 aa30.41■■■□□ 2.46
HOMER3-204ENST00000539827 HDGFP51858 240 aaKnown RBP30.4■■■□□ 2.46
HOMER3-204ENST00000539827 POGKQ9P215 609 aa30.39■■■□□ 2.46
HOMER3-204ENST00000539827 SETD1AO15047 1707 aaKnown RBP30.39■■■□□ 2.46
HOMER3-204ENST00000539827 TMEM2Q9UHN6 1383 aa30.39■■■□□ 2.45
HOMER3-204ENST00000539827 NRXN3Q9Y4C0 1643 aa30.38■■■□□ 2.45
HOMER3-204ENST00000539827 NLRP1Q9C000 1473 aa30.38■■■□□ 2.45
HOMER3-204ENST00000539827 CARD14Q9BXL6 1004 aa30.37■■■□□ 2.45
HOMER3-204ENST00000539827 SLC12A5Q9H2X9 1139 aa30.37■■■□□ 2.45
HOMER3-204ENST00000539827 MINK1Q8N4C8 1332 aaPredicted RBP30.35■■■□□ 2.45
HOMER3-204ENST00000539827 CABP2Q9NPB3 220 aa30.35■■■□□ 2.45
HOMER3-204ENST00000539827 BCANQ96GW7 911 aa30.34■■■□□ 2.45
HOMER3-204ENST00000539827 LRPPRCP42704 1394 aaKnown RBP30.33■■■□□ 2.45
HOMER3-204ENST00000539827 PUS7Q96PZ0 661 aaKnown RBP30.33■■■□□ 2.45
HOMER3-204ENST00000539827 NPC1L1Q9UHC9 1359 aa30.31■■■□□ 2.44
HOMER3-204ENST00000539827 METP08581 1390 aa30.3■■■□□ 2.44
HOMER3-204ENST00000539827 ZBED9Q6R2W3 1325 aa30.28■■■□□ 2.44
HOMER3-204ENST00000539827 PPP2R1AP30153 589 aa30.28■■■□□ 2.44
HOMER3-204ENST00000539827 DLC1Q96QB1 1528 aa30.28■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 110 ms