RNA–Protein interactions for RNA: ENST00000539814.5

LDHA-217, Transcript of lactate dehydrogenase A, humanhuman

TSL 4

Gene LDHA, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-217ENST00000539814 RRBP1Q9P2E9 1410 aaKnown RBP11.97□□□□□ -0.49
LDHA-217ENST00000539814 ITGAEP38570 1179 aa11.97□□□□□ -0.49
LDHA-217ENST00000539814 DNMT1P26358 1616 aaKnown RBP11.97□□□□□ -0.49
LDHA-217ENST00000539814 HECW2Q9P2P5 1572 aa11.96□□□□□ -0.49
LDHA-217ENST00000539814 ZMYM4Q5VZL5 1548 aa11.96□□□□□ -0.49
LDHA-217ENST00000539814 YEATS2Q9ULM3 1422 aa11.96□□□□□ -0.49
LDHA-217ENST00000539814 NEUROD2Q15784 382 aa11.96□□□□□ -0.49
LDHA-217ENST00000539814 KIDINS220Q9ULH0 1771 aa11.96□□□□□ -0.49
LDHA-217ENST00000539814 ABCA6Q8N139 1617 aa11.96□□□□□ -0.5
LDHA-217ENST00000539814 INO80Q9ULG1 1556 aaPredicted RBP11.96□□□□□ -0.5
LDHA-217ENST00000539814 ZFYVE16Q7Z3T8 1539 aa11.96□□□□□ -0.5
LDHA-217ENST00000539814 ABCC5O15440 1437 aa11.95□□□□□ -0.5
LDHA-217ENST00000539814 DAPK1P53355 1430 aa11.95□□□□□ -0.5
LDHA-217ENST00000539814 POTEIP0CG38 1075 aa11.95□□□□□ -0.5
LDHA-217ENST00000539814 TIE1P35590 1138 aa11.95□□□□□ -0.5
LDHA-217ENST00000539814 ZC3H15Q8WU90 426 aaKnown RBP11.95□□□□□ -0.5
LDHA-217ENST00000539814 BMP2KQ9NSY1 1161 aaPredicted RBP11.95□□□□□ -0.5
LDHA-217ENST00000539814 MYT1LQ9UL68 1186 aa11.95□□□□□ -0.5
LDHA-217ENST00000539814 SIGLEC1Q9BZZ2 1709 aa11.94□□□□□ -0.5
LDHA-217ENST00000539814 ATP7AQ04656 1500 aa11.94□□□□□ -0.5
LDHA-217ENST00000539814 ARHGEF40Q8TER5 1519 aa11.94□□□□□ -0.5
LDHA-217ENST00000539814 PTPRKQ15262 1439 aa11.94□□□□□ -0.5
LDHA-217ENST00000539814 DIP2CQ9Y2E4 1556 aa11.93□□□□□ -0.5
LDHA-217ENST00000539814 SPAG9O60271 1321 aaKnown RBP11.93□□□□□ -0.5
LDHA-217ENST00000539814 CHIC2Q9UKJ5 165 aa11.93□□□□□ -0.5
LDHA-217ENST00000539814 C9orf84Q5VXU9 1444 aa11.93□□□□□ -0.5
LDHA-217ENST00000539814 ADGBQ8N7X0 1667 aa11.92□□□□□ -0.5
LDHA-217ENST00000539814 PDAP1Q13442 181 aaKnown RBP11.92□□□□□ -0.5
LDHA-217ENST00000539814 ASTLQ6HA08 431 aaPredicted RBP11.92□□□□□ -0.5
LDHA-217ENST00000539814 MLH3Q9UHC1 1453 aa11.91□□□□□ -0.5
LDHA-217ENST00000539814 TTLL13PA6NNM8 815 aa11.91□□□□□ -0.5
LDHA-217ENST00000539814 ATMINO43313 823 aaPredicted RBP11.91□□□□□ -0.5
LDHA-217ENST00000539814 PSEN1P49768 467 aa11.91□□□□□ -0.5
LDHA-217ENST00000539814 MAST1Q9Y2H9 1570 aa11.91□□□□□ -0.5
LDHA-217ENST00000539814 ARHGEF1Q92888 912 aaKnown RBP11.9□□□□□ -0.5
LDHA-217ENST00000539814 TMEM106CQ9BVX2 250 aa11.9□□□□□ -0.5
LDHA-217ENST00000539814 SHANK2Q9UPX8 1470 aa11.89□□□□□ -0.51
LDHA-217ENST00000539814 SLC24A3Q9HC58 644 aa11.89□□□□□ -0.51
LDHA-217ENST00000539814 MAGI2Q86UL8 1455 aa11.88□□□□□ -0.51
LDHA-217ENST00000539814 TSPY4P0CV99 314 aa11.87□□□□□ -0.51
LDHA-217ENST00000539814 TSPY10P0CW01 314 aa11.87□□□□□ -0.51
LDHA-217ENST00000539814 ATN1P54259 1190 aaPredicted RBP11.87□□□□□ -0.51
LDHA-217ENST00000539814 RRP7BPQ9NSQ0 103 aa11.87□□□□□ -0.51
LDHA-217ENST00000539814 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.87□□□□□ -0.51
LDHA-217ENST00000539814 PLXNC1O60486 1568 aa11.87□□□□□ -0.51
LDHA-217ENST00000539814 ATP10AO60312 1499 aa11.86□□□□□ -0.51
LDHA-217ENST00000539814 RSPH4AQ5TD94 716 aa11.85□□□□□ -0.51
LDHA-217ENST00000539814 RTEL1-TNFRSF6BF6WH68 1400 aa11.85□□□□□ -0.51
LDHA-217ENST00000539814 A2MP01023 1474 aa11.84□□□□□ -0.51
LDHA-217ENST00000539814 KIF15Q9NS87 1388 aa11.84□□□□□ -0.51
LDHA-217ENST00000539814 MFRPQ9BY79 579 aa11.84□□□□□ -0.51
LDHA-217ENST00000539814 ADGRL2O95490 1459 aa11.83□□□□□ -0.52
LDHA-217ENST00000539814 TESPA1A2RU30 521 aaPredicted RBP11.83□□□□□ -0.52
LDHA-217ENST00000539814 SEMA3EO15041 775 aa11.83□□□□□ -0.52
LDHA-217ENST00000539814 MLECQ14165 292 aa11.83□□□□□ -0.52
LDHA-217ENST00000539814 E2F4Q16254 413 aa11.83□□□□□ -0.52
LDHA-217ENST00000539814 NCOA1Q15788 1441 aa11.83□□□□□ -0.52
LDHA-217ENST00000539814 ARID4BQ4LE39 1312 aaPredicted RBP11.83□□□□□ -0.52
LDHA-217ENST00000539814 ANKRD30AQ9BXX3 1397 aa11.82□□□□□ -0.52
LDHA-217ENST00000539814 TRIM35Q9UPQ4 493 aa11.82□□□□□ -0.52
LDHA-217ENST00000539814 REREQ9P2R6 1566 aa11.81□□□□□ -0.52
LDHA-217ENST00000539814 GCC2Q8IWJ2 1684 aa11.81□□□□□ -0.52
LDHA-217ENST00000539814 DUOX2Q9NRD8 1548 aa11.81□□□□□ -0.52
LDHA-217ENST00000539814 ROCK1Q13464 1354 aa11.79□□□□□ -0.52
LDHA-217ENST00000539814 BCORL1Q5H9F3 1711 aa11.79□□□□□ -0.52
LDHA-217ENST00000539814 DHX29Q7Z478 1369 aaKnown RBP11.79□□□□□ -0.52
LDHA-217ENST00000539814 NAIPQ13075 1403 aa11.77□□□□□ -0.52
LDHA-217ENST00000539814 AGLP35573 1532 aa11.77□□□□□ -0.52
LDHA-217ENST00000539814 KIF3BO15066 747 aa11.77□□□□□ -0.53
LDHA-217ENST00000539814 MROH1Q8NDA8 1641 aa11.77□□□□□ -0.53
LDHA-217ENST00000539814 MADDQ8WXG6 1647 aa11.77□□□□□ -0.53
LDHA-217ENST00000539814 EIF2AK4Q9P2K8 1649 aaKnown RBP11.77□□□□□ -0.53
LDHA-217ENST00000539814 ERBINQ96RT1 1412 aa11.77□□□□□ -0.53
LDHA-217ENST00000539814 ANKRD50Q9ULJ7 1429 aa11.77□□□□□ -0.53
LDHA-217ENST00000539814 ZMYND10O75800 440 aa11.76□□□□□ -0.53
LDHA-217ENST00000539814 TRIM26Q12899 539 aaPredicted RBP11.76□□□□□ -0.53
LDHA-217ENST00000539814 GGT6Q6P531 493 aa11.76□□□□□ -0.53
LDHA-217ENST00000539814 CABP2Q9NPB3 220 aa11.76□□□□□ -0.53
LDHA-217ENST00000539814 FER1L4A9Z1Z3 1794 aa11.76□□□□□ -0.53
LDHA-217ENST00000539814 HFM1A2PYH4 1435 aa11.76□□□□□ -0.53
LDHA-217ENST00000539814 RNF17Q9BXT8 1623 aaKnown RBP11.75□□□□□ -0.53
LDHA-217ENST00000539814 RIMS1Q86UR5 1692 aaKnown RBP11.75□□□□□ -0.53
LDHA-217ENST00000539814 SLC39A7Q92504 469 aa11.75□□□□□ -0.53
LDHA-217ENST00000539814 ADAMTSL3P82987 1691 aa11.75□□□□□ -0.53
LDHA-217ENST00000539814 PPP1R37O75864 691 aa11.74□□□□□ -0.53
LDHA-217ENST00000539814 GOLGA2Q08379 1002 aa11.74□□□□□ -0.53
LDHA-217ENST00000539814 METRNQ9UJH8 293 aa11.74□□□□□ -0.53
LDHA-217ENST00000539814 DEPDC5O75140 1603 aa11.74□□□□□ -0.53
LDHA-217ENST00000539814 CLTCQ00610 1675 aaKnown RBP11.74□□□□□ -0.53
LDHA-217ENST00000539814 CEP152O94986 1710 aa11.74□□□□□ -0.53
LDHA-217ENST00000539814 C7P10643 843 aa11.73□□□□□ -0.53
LDHA-217ENST00000539814 IER5LQ5T953 404 aa11.73□□□□□ -0.53
LDHA-217ENST00000539814 UNC13BO14795 1591 aa11.72□□□□□ -0.53
LDHA-217ENST00000539814 KDM4FA0A1W2PPD8 638 aa11.72□□□□□ -0.53
LDHA-217ENST00000539814 PRDM15P57071 1507 aaPredicted RBP11.71□□□□□ -0.53
LDHA-217ENST00000539814 SMYD5Q6GMV2 418 aa11.71□□□□□ -0.53
LDHA-217ENST00000539814 PCGF6Q9BYE7 350 aa11.71□□□□□ -0.53
LDHA-217ENST00000539814 SETD5Q9C0A6 1442 aa11.7□□□□□ -0.54
LDHA-217ENST00000539814 RAB3GAP2Q9H2M9 1393 aa11.7□□□□□ -0.54
LDHA-217ENST00000539814 MKRN3Q13064 507 aaKnown RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms