RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 API5Q9BZZ5 524 aaKnown RBP7.95□□□□□ -1.14
LSAMP-207ENST00000539563 PSME1Q06323 249 aa7.95□□□□□ -1.14
LSAMP-207ENST00000539563 FYCO1Q9BQS8 1478 aa7.95□□□□□ -1.14
LSAMP-207ENST00000539563 TPM1P09493 284 aa7.95□□□□□ -1.14
LSAMP-207ENST00000539563 AAMPQ13685 434 aa7.95□□□□□ -1.14
LSAMP-207ENST00000539563 RUNDC1Q96C34 613 aa7.95□□□□□ -1.14
LSAMP-207ENST00000539563 A0A0U1RQG5 324 aaPredicted RBP7.95□□□□□ -1.14
LSAMP-207ENST00000539563 CRBNQ96SW2 442 aa7.95□□□□□ -1.14
LSAMP-207ENST00000539563 DIAPH3Q9NSV4 1193 aa7.95□□□□□ -1.14
LSAMP-207ENST00000539563 SUPT6HQ7KZ85 1726 aaKnown RBP7.95□□□□□ -1.14
LSAMP-207ENST00000539563 ARHGAP5Q13017 1502 aa7.95□□□□□ -1.14
LSAMP-207ENST00000539563 TSHZ2Q9NRE2 1034 aa7.95□□□□□ -1.14
LSAMP-207ENST00000539563 RRBP1Q9P2E9 1410 aaKnown RBP7.95□□□□□ -1.14
LSAMP-207ENST00000539563 TRIM29Q14134 588 aa7.95□□□□□ -1.14
LSAMP-207ENST00000539563 NOL8Q76FK4 1167 aaKnown RBP7.95□□□□□ -1.14
LSAMP-207ENST00000539563 OSCARQ8IYS5 282 aa7.95□□□□□ -1.14
LSAMP-207ENST00000539563 LRRC9Q6ZRR7 1453 aa7.94□□□□□ -1.14
LSAMP-207ENST00000539563 CREBRFQ8IUR6 639 aa7.94□□□□□ -1.14
LSAMP-207ENST00000539563 MINK1Q8N4C8 1332 aaPredicted RBP7.94□□□□□ -1.14
LSAMP-207ENST00000539563 FGD6Q6ZV73 1430 aa7.94□□□□□ -1.14
LSAMP-207ENST00000539563 ERICH3Q5RHP9 1530 aa7.94□□□□□ -1.14
LSAMP-207ENST00000539563 FOXD4L1Q9NU39 408 aa7.94□□□□□ -1.14
LSAMP-207ENST00000539563 HOOK1Q9UJC3 728 aaKnown RBP7.94□□□□□ -1.14
LSAMP-207ENST00000539563 RNF20Q5VTR2 975 aa7.94□□□□□ -1.14
LSAMP-207ENST00000539563 VPS53Q5VIR6 699 aa7.94□□□□□ -1.14
LSAMP-207ENST00000539563 ZKSCAN1P17029 563 aaPredicted RBP7.93□□□□□ -1.14
LSAMP-207ENST00000539563 PDE4AP27815 886 aa7.93□□□□□ -1.14
LSAMP-207ENST00000539563 CCDC47Q96A33 483 aaKnown RBP7.93□□□□□ -1.14
LSAMP-207ENST00000539563 TRIM34Q9BYJ4 488 aa7.93□□□□□ -1.14
LSAMP-207ENST00000539563 RIPK4P57078 832 aa7.93□□□□□ -1.14
LSAMP-207ENST00000539563 HSP90AB4PQ58FF6 505 aa7.93□□□□□ -1.14
LSAMP-207ENST00000539563 IFIT2P09913 472 aaKnown RBP7.93□□□□□ -1.14
LSAMP-207ENST00000539563 DDX49Q9Y6V7 483 aaKnown RBP7.92□□□□□ -1.14
LSAMP-207ENST00000539563 APAF1O14727 1248 aa7.92□□□□□ -1.14
LSAMP-207ENST00000539563 EFCAB5A4FU69 1503 aa7.92□□□□□ -1.14
LSAMP-207ENST00000539563 BECN2A8MW95 431 aa7.92□□□□□ -1.14
LSAMP-207ENST00000539563 TRDNQ13061 729 aa7.92□□□□□ -1.14
LSAMP-207ENST00000539563 CCDC70Q6NSX1 233 aa7.92□□□□□ -1.14
LSAMP-207ENST00000539563 CASKIN1Q8WXD9 1431 aa7.92□□□□□ -1.14
LSAMP-207ENST00000539563 DZIP1LQ8IYY4 767 aaKnown RBP7.92□□□□□ -1.14
LSAMP-207ENST00000539563 ELL2O00472 640 aaPredicted RBP7.92□□□□□ -1.14
LSAMP-207ENST00000539563 BCL2L13Q9BXK5 485 aa7.92□□□□□ -1.14
LSAMP-207ENST00000539563 GNAI1P63096 354 aa7.91□□□□□ -1.14
LSAMP-207ENST00000539563 INTS3Q68E01 1043 aaKnown RBP7.91□□□□□ -1.14
LSAMP-207ENST00000539563 HECW1Q76N89 1606 aa7.91□□□□□ -1.14
LSAMP-207ENST00000539563 PES1O00541 588 aaKnown RBP7.91□□□□□ -1.14
LSAMP-207ENST00000539563 G3BP1Q13283 466 aaKnown RBP eCLIP7.91□□□□□ -1.14
LSAMP-207ENST00000539563 IGF1RP08069 1367 aa7.91□□□□□ -1.14
LSAMP-207ENST00000539563 EIF2S2P20042 333 aaKnown RBP7.91□□□□□ -1.14
LSAMP-207ENST00000539563 COG6Q9Y2V7 657 aa7.91□□□□□ -1.14
LSAMP-207ENST00000539563 CYB5RLQ6IPT4 315 aa7.91□□□□□ -1.14
LSAMP-207ENST00000539563 SYNJ2O15056 1496 aa7.91□□□□□ -1.14
LSAMP-207ENST00000539563 ERICH2A1L162 156 aa7.9□□□□□ -1.14
LSAMP-207ENST00000539563 VPS37DQ86XT2 251 aa7.9□□□□□ -1.14
LSAMP-207ENST00000539563 ANKRD20A12PQ8NF67 263 aa7.9□□□□□ -1.14
LSAMP-207ENST00000539563 EHBP1L1Q8N3D4 1523 aa7.9□□□□□ -1.14
LSAMP-207ENST00000539563 GRIN2BQ13224 1484 aa7.9□□□□□ -1.14
LSAMP-207ENST00000539563 ERC2O15083 957 aa7.9□□□□□ -1.14
LSAMP-207ENST00000539563 PLIN1O60240 522 aa7.9□□□□□ -1.14
LSAMP-207ENST00000539563 FOXD4L5Q5VV16 416 aaPredicted RBP7.9□□□□□ -1.14
LSAMP-207ENST00000539563 FOXD4L4Q8WXT5 416 aaPredicted RBP7.9□□□□□ -1.14
LSAMP-207ENST00000539563 TCEAL9Q9UHQ7 104 aa7.9□□□□□ -1.14
LSAMP-207ENST00000539563 CNTLNQ9NXG0 1405 aa7.9□□□□□ -1.14
LSAMP-207ENST00000539563 CCDC7Q96M83 1385 aa7.9□□□□□ -1.14
LSAMP-207ENST00000539563 EXOC6Q8TAG9 804 aa7.9□□□□□ -1.14
LSAMP-207ENST00000539563 ANO2Q9NQ90 1003 aa7.9□□□□□ -1.15
LSAMP-207ENST00000539563 MCTP1Q6DN14 999 aa7.9□□□□□ -1.15
LSAMP-207ENST00000539563 WWC1Q8IX03 1113 aa7.9□□□□□ -1.15
LSAMP-207ENST00000539563 TSPYL4Q9UJ04 414 aa7.9□□□□□ -1.15
LSAMP-207ENST00000539563 CTDP1Q9Y5B0 961 aaPredicted RBP7.9□□□□□ -1.15
LSAMP-207ENST00000539563 RAD54L2Q9Y4B4 1467 aa7.9□□□□□ -1.15
LSAMP-207ENST00000539563 SCAPERQ9BY12 1400 aa7.9□□□□□ -1.15
LSAMP-207ENST00000539563 ATF3P18847 181 aa7.9□□□□□ -1.15
LSAMP-207ENST00000539563 NINLQ9Y2I6 1382 aa7.89□□□□□ -1.15
LSAMP-207ENST00000539563 GPS2Q13227 327 aa7.89□□□□□ -1.15
LSAMP-207ENST00000539563 APPP05067 770 aa7.89□□□□□ -1.15
LSAMP-207ENST00000539563 NUCB2P80303 420 aa7.89□□□□□ -1.15
LSAMP-207ENST00000539563 ANKRD50Q9ULJ7 1429 aa7.89□□□□□ -1.15
LSAMP-207ENST00000539563 PLEKHH2Q8IVE3 1493 aa7.89□□□□□ -1.15
LSAMP-207ENST00000539563 PRM3Q9NNZ6 103 aa7.89□□□□□ -1.15
LSAMP-207ENST00000539563 BRD4O60885 1362 aaPredicted RBP7.89□□□□□ -1.15
LSAMP-207ENST00000539563 NCOA2Q15596 1464 aa7.89□□□□□ -1.15
LSAMP-207ENST00000539563 TNNT3P45378 269 aaPredicted RBP7.88□□□□□ -1.15
LSAMP-207ENST00000539563 FKBP5Q13451 457 aaPredicted RBP7.88□□□□□ -1.15
LSAMP-207ENST00000539563 CHMP5Q9NZZ3 219 aa7.88□□□□□ -1.15
LSAMP-207ENST00000539563 CPLX1O14810 134 aa7.88□□□□□ -1.15
LSAMP-207ENST00000539563 RAPGEF4Q8WZA2 1011 aa7.88□□□□□ -1.15
LSAMP-207ENST00000539563 GSE1Q14687 1217 aa7.88□□□□□ -1.15
LSAMP-207ENST00000539563 RIC3Q7Z5B4 369 aa7.87□□□□□ -1.15
LSAMP-207ENST00000539563 FAM69CQ0P6D2 419 aa7.87□□□□□ -1.15
LSAMP-207ENST00000539563 IPO7O95373 1038 aaKnown RBP7.87□□□□□ -1.15
LSAMP-207ENST00000539563 MEX3CQ5U5Q3 659 aaKnown RBP7.87□□□□□ -1.15
LSAMP-207ENST00000539563 SMC3Q9UQE7 1217 aa7.87□□□□□ -1.15
LSAMP-207ENST00000539563 NCAPD3P42695 1498 aa7.87□□□□□ -1.15
LSAMP-207ENST00000539563 SAFBQ15424 915 aaKnown RBP eCLIP7.87□□□□□ -1.15
LSAMP-207ENST00000539563 FANCIQ9NVI1 1328 aa7.86□□□□□ -1.15
LSAMP-207ENST00000539563 NFXL1Q6ZNB6 911 aa7.86□□□□□ -1.15
LSAMP-207ENST00000539563 MSH5O43196 834 aa7.86□□□□□ -1.15
LSAMP-207ENST00000539563 SASS6Q6UVJ0 657 aa7.86□□□□□ -1.15
LSAMP-207ENST00000539563 NECTIN2Q92692 538 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms