RNA–Protein interactions for RNA: ENST00000538410.5

COPS7A-208, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3 BASIC

Gene COPS7A, Length 1,610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-208ENST00000538410 NPHP4O75161 1426 aaPredicted RBP29.53■■■□□ 2.32
COPS7A-208ENST00000538410 IQSEC2Q5JU85 1478 aa29.51■■■□□ 2.31
COPS7A-208ENST00000538410 STAG3Q9UJ98 1225 aa29.5■■■□□ 2.31
COPS7A-208ENST00000538410 IQGAP1P46940 1657 aa29.49■■■□□ 2.31
COPS7A-208ENST00000538410 IDI1Q13907 227 aa29.49■■■□□ 2.31
COPS7A-208ENST00000538410 KDM5AP29375 1690 aaKnown RBP29.47■■■□□ 2.31
COPS7A-208ENST00000538410 ADGRB3O60242 1522 aa29.47■■■□□ 2.31
COPS7A-208ENST00000538410 RGL3Q3MIN7 710 aa29.46■■■□□ 2.31
COPS7A-208ENST00000538410 SLIT1O75093 1534 aa29.46■■■□□ 2.31
COPS7A-208ENST00000538410 SLC52A1Q9NWF4 448 aa29.45■■■□□ 2.31
COPS7A-208ENST00000538410 ARHGAP23Q9P227 1491 aa29.45■■■□□ 2.3
COPS7A-208ENST00000538410 SCAF11Q99590 1463 aaKnown RBP29.44■■■□□ 2.3
COPS7A-208ENST00000538410 TXNDC2Q86VQ3 553 aa29.44■■■□□ 2.3
COPS7A-208ENST00000538410 MYO5BQ9ULV0 1848 aa29.44■■■□□ 2.3
COPS7A-208ENST00000538410 IFT172Q9UG01 1749 aa29.43■■■□□ 2.3
COPS7A-208ENST00000538410 DCAF11Q8TEB1 546 aa29.42■■■□□ 2.3
COPS7A-208ENST00000538410 EID1Q9Y6B2 187 aa29.42■■■□□ 2.3
COPS7A-208ENST00000538410 LTKP29376 864 aa29.41■■■□□ 2.3
COPS7A-208ENST00000538410 TMEM2Q9UHN6 1383 aa29.4■■■□□ 2.3
COPS7A-208ENST00000538410 TMEM131LA2VDJ0 1609 aa29.39■■■□□ 2.3
COPS7A-208ENST00000538410 CPS1P31327 1500 aa29.39■■■□□ 2.3
COPS7A-208ENST00000538410 PPLO60437 1756 aa29.37■■■□□ 2.29
COPS7A-208ENST00000538410 NBPF8Q3BBV2 869 aa29.37■■■□□ 2.29
COPS7A-208ENST00000538410 KDM2AQ9Y2K7 1162 aa29.37■■■□□ 2.29
COPS7A-208ENST00000538410 CHGAP10645 457 aaKnown RBP29.36■■■□□ 2.29
COPS7A-208ENST00000538410 STAC3Q96MF2 364 aa29.32■■■□□ 2.28
COPS7A-208ENST00000538410 PRAG1Q86YV5 1406 aa29.31■■■□□ 2.28
COPS7A-208ENST00000538410 UBAP1LF5GYI3 381 aa29.3■■■□□ 2.28
COPS7A-208ENST00000538410 ZNF326Q5BKZ1 582 aaKnown RBP29.3■■■□□ 2.28
COPS7A-208ENST00000538410 TRPM1Q7Z4N2 1603 aa29.29■■■□□ 2.28
COPS7A-208ENST00000538410 MYOM2P54296 1465 aa29.29■■■□□ 2.28
COPS7A-208ENST00000538410 STRCP1A6NGW2 1772 aa29.28■■■□□ 2.28
COPS7A-208ENST00000538410 RPGRIP1LQ68CZ1 1315 aa29.28■■■□□ 2.28
COPS7A-208ENST00000538410 NEXMIFQ5QGS0 1516 aa29.27■■■□□ 2.28
COPS7A-208ENST00000538410 RALGAPBQ86X10 1494 aa29.25■■■□□ 2.27
COPS7A-208ENST00000538410 HDGFP51858 240 aaKnown RBP29.22■■■□□ 2.27
COPS7A-208ENST00000538410 KIAA1210Q9ULL0 1709 aa29.21■■■□□ 2.27
COPS7A-208ENST00000538410 NRXN1Q9ULB1 1477 aa29.2■■■□□ 2.27
COPS7A-208ENST00000538410 ZFYVE9O95405 1425 aa29.19■■■□□ 2.26
COPS7A-208ENST00000538410 RIMS2Q9UQ26 1411 aa29.19■■■□□ 2.26
COPS7A-208ENST00000538410 BCANQ96GW7 911 aa29.19■■■□□ 2.26
COPS7A-208ENST00000538410 LRRC7Q96NW7 1537 aa29.19■■■□□ 2.26
COPS7A-208ENST00000538410 TOM1O60784 492 aa29.18■■■□□ 2.26
COPS7A-208ENST00000538410 SLC26A8Q96RN1 970 aa29.16■■■□□ 2.26
COPS7A-208ENST00000538410 ADGRF5Q8IZF2 1346 aa29.16■■■□□ 2.26
COPS7A-208ENST00000538410 ZNF316A6NFI3 1004 aaPredicted RBP29.14■■■□□ 2.26
COPS7A-208ENST00000538410 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.14■■■□□ 2.26
COPS7A-208ENST00000538410 LAMC1P11047 1609 aa29.14■■■□□ 2.25
COPS7A-208ENST00000538410 VGFO15240 615 aaPredicted RBP29.13■■■□□ 2.25
COPS7A-208ENST00000538410 PLEKHG1Q9ULL1 1385 aa29.13■■■□□ 2.25
COPS7A-208ENST00000538410 ROCK2O75116 1388 aaKnown RBP29.11■■■□□ 2.25
COPS7A-208ENST00000538410 SENP3Q9H4L4 574 aaPredicted RBP29.11■■■□□ 2.25
COPS7A-208ENST00000538410 PIK3C2GO75747 1445 aa29.11■■■□□ 2.25
COPS7A-208ENST00000538410 SCAF1Q9H7N4 1312 aaKnown RBP29.11■■■□□ 2.25
COPS7A-208ENST00000538410 GPRASP1Q5JY77 1395 aa29.09■■■□□ 2.25
COPS7A-208ENST00000538410 KCNA6P17658 529 aa29.09■■■□□ 2.25
COPS7A-208ENST00000538410 PIP4K2BP78356 416 aa29.09■■■□□ 2.25
COPS7A-208ENST00000538410 NBPF1Q3BBV0 1214 aa29.08■■■□□ 2.25
COPS7A-208ENST00000538410 NUTM2DQ5VT03 806 aaPredicted RBP29.08■■■□□ 2.25
COPS7A-208ENST00000538410 XIRP1Q702N8 1843 aaKnown RBP29.07■■■□□ 2.24
COPS7A-208ENST00000538410 EIF4G2P78344 907 aaKnown RBP eCLIP29.06■■■□□ 2.24
COPS7A-208ENST00000538410 CARD11Q9BXL7 1154 aa29.06■■■□□ 2.24
COPS7A-208ENST00000538410 SETBP1Q9Y6X0 1596 aa29.03■■■□□ 2.24
COPS7A-208ENST00000538410 ALKQ9UM73 1620 aa29.03■■■□□ 2.24
COPS7A-208ENST00000538410 HSPA5P11021 654 aaKnown RBP29.02■■■□□ 2.24
COPS7A-208ENST00000538410 CFAP70Q5T0N1 1121 aa29.02■■■□□ 2.24
COPS7A-208ENST00000538410 TBX22Q9Y458 520 aa29.02■■■□□ 2.24
COPS7A-208ENST00000538410 USP47Q96K76 1375 aa29.01■■■□□ 2.24
COPS7A-208ENST00000538410 NWD1Q149M9 1564 aa29.01■■■□□ 2.24
COPS7A-208ENST00000538410 CHD2O14647 1828 aaKnown RBP29.01■■■□□ 2.23
COPS7A-208ENST00000538410 PROSER2Q86WR7 435 aaPredicted RBP29■■■□□ 2.23
COPS7A-208ENST00000538410 C14orf93Q9H972 538 aaKnown RBP29■■■□□ 2.23
COPS7A-208ENST00000538410 NKTRP30414 1462 aaKnown RBP28.99■■■□□ 2.23
COPS7A-208ENST00000538410 TMEM94Q12767 1356 aa28.99■■■□□ 2.23
COPS7A-208ENST00000538410 HIRIP3Q9BW71 556 aaPredicted RBP28.98■■■□□ 2.23
COPS7A-208ENST00000538410 ADAMTS13Q76LX8 1427 aa28.97■■■□□ 2.23
COPS7A-208ENST00000538410 DIP2AQ14689 1571 aa28.97■■■□□ 2.23
COPS7A-208ENST00000538410 NRXN3Q9Y4C0 1643 aa28.95■■■□□ 2.23
COPS7A-208ENST00000538410 ADGRB1O14514 1584 aa28.95■■■□□ 2.23
COPS7A-208ENST00000538410 SETD1AO15047 1707 aaKnown RBP28.94■■■□□ 2.22
COPS7A-208ENST00000538410 HSPA1LP34931 641 aa28.94■■■□□ 2.22
COPS7A-208ENST00000538410 RBM33Q96EV2 1170 aaKnown RBP28.93■■■□□ 2.22
COPS7A-208ENST00000538410 PIK3R4Q99570 1358 aa28.91■■■□□ 2.22
COPS7A-208ENST00000538410 ASXL1Q8IXJ9 1541 aa28.89■■■□□ 2.22
COPS7A-208ENST00000538410 DISP3Q9P2K9 1392 aa28.86■■■□□ 2.21
COPS7A-208ENST00000538410 ST20-MTHFSA0A0A6YYL1 179 aa28.85■■■□□ 2.21
COPS7A-208ENST00000538410 TMEM132EQ6IEE7 984 aa28.85■■■□□ 2.21
COPS7A-208ENST00000538410 MSH6P52701 1360 aa28.84■■■□□ 2.21
COPS7A-208ENST00000538410 ARHGEF28Q8N1W1 1705 aaKnown RBP28.82■■■□□ 2.2
COPS7A-208ENST00000538410 AMOTL2Q9Y2J4 779 aa28.82■■■□□ 2.2
COPS7A-208ENST00000538410 EIF3AQ14152 1382 aaKnown RBP28.82■■■□□ 2.2
COPS7A-208ENST00000538410 PTPRUQ92729 1446 aa28.8■■■□□ 2.2
COPS7A-208ENST00000538410 NCOA3Q9Y6Q9 1424 aa28.8■■■□□ 2.2
COPS7A-208ENST00000538410 C14orf37Q86TY3 774 aa28.78■■■□□ 2.2
COPS7A-208ENST00000538410 FAM135BQ49AJ0 1406 aa28.78■■■□□ 2.2
COPS7A-208ENST00000538410 YTHDC2Q9H6S0 1430 aaKnown RBP28.76■■■□□ 2.19
COPS7A-208ENST00000538410 TRAK1Q9UPV9 953 aa28.76■■■□□ 2.19
COPS7A-208ENST00000538410 METP08581 1390 aa28.75■■■□□ 2.19
COPS7A-208ENST00000538410 C11orf95C9JLR9 678 aaPredicted RBP28.75■■■□□ 2.19
COPS7A-208ENST00000538410 XRN1Q8IZH2 1706 aaKnown RBP28.75■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms