RNA–Protein interactions for RNA: ENST00000536797.5

LPCAT3-204, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 2

Gene LPCAT3, Length 1,412 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-204ENST00000536797 HDGFP51858 240 aaKnown RBP30.98■■■□□ 2.55
LPCAT3-204ENST00000536797 CCDC144AA2RUR9 1427 aa30.96■■■□□ 2.55
LPCAT3-204ENST00000536797 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.94■■■□□ 2.54
LPCAT3-204ENST00000536797 PPP1R15AO75807 674 aaPredicted RBP30.93■■■□□ 2.54
LPCAT3-204ENST00000536797 ZNF326Q5BKZ1 582 aaKnown RBP30.93■■■□□ 2.54
LPCAT3-204ENST00000536797 ZNF335Q9H4Z2 1342 aaPredicted RBP30.89■■■□□ 2.54
LPCAT3-204ENST00000536797 PLEKHG1Q9ULL1 1385 aa30.87■■■□□ 2.53
LPCAT3-204ENST00000536797 LTBP4Q8N2S1 1624 aa30.86■■■□□ 2.53
LPCAT3-204ENST00000536797 NUTM2DQ5VT03 806 aaPredicted RBP30.86■■■□□ 2.53
LPCAT3-204ENST00000536797 BCANQ96GW7 911 aa30.86■■■□□ 2.53
LPCAT3-204ENST00000536797 NEXMIFQ5QGS0 1516 aa30.84■■■□□ 2.53
LPCAT3-204ENST00000536797 ANKRD30BQ9BXX2 1392 aa30.82■■■□□ 2.52
LPCAT3-204ENST00000536797 CERKQ8TCT0 537 aa30.8■■■□□ 2.52
LPCAT3-204ENST00000536797 RPGRIP1LQ68CZ1 1315 aa30.79■■■□□ 2.52
LPCAT3-204ENST00000536797 SLC26A8Q96RN1 970 aa30.79■■■□□ 2.52
LPCAT3-204ENST00000536797 SENP3Q9H4L4 574 aaPredicted RBP30.79■■■□□ 2.52
LPCAT3-204ENST00000536797 SPATA31E1Q6ZUB1 1445 aa30.78■■■□□ 2.52
LPCAT3-204ENST00000536797 CPS1P31327 1500 aa30.76■■■□□ 2.51
LPCAT3-204ENST00000536797 PPLO60437 1756 aa30.76■■■□□ 2.51
LPCAT3-204ENST00000536797 RGL3Q3MIN7 710 aa30.74■■■□□ 2.51
LPCAT3-204ENST00000536797 DIP2AQ14689 1571 aa30.73■■■□□ 2.51
LPCAT3-204ENST00000536797 STRCP1A6NGW2 1772 aa30.73■■■□□ 2.51
LPCAT3-204ENST00000536797 VGFO15240 615 aaPredicted RBP30.73■■■□□ 2.51
LPCAT3-204ENST00000536797 SETBP1Q9Y6X0 1596 aa30.72■■■□□ 2.51
LPCAT3-204ENST00000536797 ADAMTS13Q76LX8 1427 aa30.72■■■□□ 2.51
LPCAT3-204ENST00000536797 TBX22Q9Y458 520 aa30.7■■■□□ 2.5
LPCAT3-204ENST00000536797 NRXN3Q9Y4C0 1643 aa30.69■■■□□ 2.5
LPCAT3-204ENST00000536797 IFT172Q9UG01 1749 aa30.69■■■□□ 2.5
LPCAT3-204ENST00000536797 IQSEC2Q5JU85 1478 aa30.68■■■□□ 2.5
LPCAT3-204ENST00000536797 KCNA6P17658 529 aa30.64■■■□□ 2.5
LPCAT3-204ENST00000536797 CHD2O14647 1828 aaKnown RBP30.64■■■□□ 2.49
LPCAT3-204ENST00000536797 NWD1Q149M9 1564 aa30.63■■■□□ 2.49
LPCAT3-204ENST00000536797 DHX57Q6P158 1386 aaKnown RBP30.62■■■□□ 2.49
LPCAT3-204ENST00000536797 PIK3R4Q99570 1358 aa30.61■■■□□ 2.49
LPCAT3-204ENST00000536797 PCGF6Q9BYE7 350 aa30.61■■■□□ 2.49
LPCAT3-204ENST00000536797 LRRC7Q96NW7 1537 aa30.6■■■□□ 2.49
LPCAT3-204ENST00000536797 NKTRP30414 1462 aaKnown RBP30.58■■■□□ 2.49
LPCAT3-204ENST00000536797 ADGRF5Q8IZF2 1346 aa30.57■■■□□ 2.48
LPCAT3-204ENST00000536797 FBXO41Q8TF61 875 aa30.56■■■□□ 2.48
LPCAT3-204ENST00000536797 ALKQ9UM73 1620 aa30.55■■■□□ 2.48
LPCAT3-204ENST00000536797 MYOM2P54296 1465 aa30.55■■■□□ 2.48
LPCAT3-204ENST00000536797 SETD1AO15047 1707 aaKnown RBP30.53■■■□□ 2.48
LPCAT3-204ENST00000536797 METP08581 1390 aa30.53■■■□□ 2.48
LPCAT3-204ENST00000536797 PROSER2Q86WR7 435 aaPredicted RBP30.51■■■□□ 2.47
LPCAT3-204ENST00000536797 PIK3C2GO75747 1445 aa30.51■■■□□ 2.47
LPCAT3-204ENST00000536797 PTPRUQ92729 1446 aa30.51■■■□□ 2.47
LPCAT3-204ENST00000536797 XIRP1Q702N8 1843 aaKnown RBP30.5■■■□□ 2.47
LPCAT3-204ENST00000536797 AMOTL2Q9Y2J4 779 aa30.49■■■□□ 2.47
LPCAT3-204ENST00000536797 NRXN1Q9ULB1 1477 aa30.49■■■□□ 2.47
LPCAT3-204ENST00000536797 DCAF11Q8TEB1 546 aa30.48■■■□□ 2.47
LPCAT3-204ENST00000536797 XRN1Q8IZH2 1706 aaKnown RBP30.48■■■□□ 2.47
LPCAT3-204ENST00000536797 TMEM94Q12767 1356 aa30.47■■■□□ 2.47
LPCAT3-204ENST00000536797 STAC3Q96MF2 364 aa30.47■■■□□ 2.47
LPCAT3-204ENST00000536797 ILDR1Q86SU0 546 aaPredicted RBP30.45■■■□□ 2.46
LPCAT3-204ENST00000536797 KDM2AQ9Y2K7 1162 aa30.45■■■□□ 2.46
LPCAT3-204ENST00000536797 SIN3AQ96ST3 1273 aa30.44■■■□□ 2.46
LPCAT3-204ENST00000536797 UBAP1LF5GYI3 381 aa30.43■■■□□ 2.46
LPCAT3-204ENST00000536797 LAMC1P11047 1609 aa30.43■■■□□ 2.46
LPCAT3-204ENST00000536797 RBM33Q96EV2 1170 aaKnown RBP30.42■■■□□ 2.46
LPCAT3-204ENST00000536797 NEUROD1Q13562 356 aa30.4■■■□□ 2.46
LPCAT3-204ENST00000536797 TOM1O60784 492 aa30.39■■■□□ 2.46
LPCAT3-204ENST00000536797 C14orf93Q9H972 538 aaKnown RBP30.39■■■□□ 2.45
LPCAT3-204ENST00000536797 NCOA3Q9Y6Q9 1424 aa30.38■■■□□ 2.45
LPCAT3-204ENST00000536797 CFAP70Q5T0N1 1121 aa30.36■■■□□ 2.45
LPCAT3-204ENST00000536797 ASXL1Q8IXJ9 1541 aa30.36■■■□□ 2.45
LPCAT3-204ENST00000536797 MSH6P52701 1360 aa30.35■■■□□ 2.45
LPCAT3-204ENST00000536797 PTCH1Q13635 1447 aa30.34■■■□□ 2.45
LPCAT3-204ENST00000536797 C14orf37Q86TY3 774 aa30.34■■■□□ 2.45
LPCAT3-204ENST00000536797 PRAG1Q86YV5 1406 aa30.33■■■□□ 2.45
LPCAT3-204ENST00000536797 TMEM132EQ6IEE7 984 aa30.32■■■□□ 2.44
LPCAT3-204ENST00000536797 L3MBTL2Q969R5 705 aa30.3■■■□□ 2.44
LPCAT3-204ENST00000536797 LRPPRCP42704 1394 aaKnown RBP30.3■■■□□ 2.44
LPCAT3-204ENST00000536797 ROBO2Q9HCK4 1378 aa30.29■■■□□ 2.44
LPCAT3-204ENST00000536797 KNDC1Q76NI1 1749 aa30.29■■■□□ 2.44
LPCAT3-204ENST00000536797 YTHDC2Q9H6S0 1430 aaKnown RBP30.29■■■□□ 2.44
LPCAT3-204ENST00000536797 SCAF1Q9H7N4 1312 aaKnown RBP30.28■■■□□ 2.44
LPCAT3-204ENST00000536797 PIP4K2BP78356 416 aa30.28■■■□□ 2.44
LPCAT3-204ENST00000536797 STK26Q9P289 416 aa30.28■■■□□ 2.44
LPCAT3-204ENST00000536797 TECPR2O15040 1411 aa30.27■■■□□ 2.44
LPCAT3-204ENST00000536797 ABCC11Q96J66 1382 aa30.27■■■□□ 2.44
LPCAT3-204ENST00000536797 C19orf44Q9H6X5 657 aa30.26■■■□□ 2.43
LPCAT3-204ENST00000536797 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.26■■■□□ 2.43
LPCAT3-204ENST00000536797 ADGRB1O14514 1584 aa30.24■■■□□ 2.43
LPCAT3-204ENST00000536797 KIAA1210Q9ULL0 1709 aa30.23■■■□□ 2.43
LPCAT3-204ENST00000536797 NALCNQ8IZF0 1738 aa30.22■■■□□ 2.43
LPCAT3-204ENST00000536797 ADGRL3Q9HAR2 1447 aa30.22■■■□□ 2.43
LPCAT3-204ENST00000536797 TONSLQ96HA7 1378 aa30.22■■■□□ 2.43
LPCAT3-204ENST00000536797 ATF3P18847 181 aa30.21■■■□□ 2.43
LPCAT3-204ENST00000536797 CADPS2Q86UW7 1296 aa30.2■■■□□ 2.42
LPCAT3-204ENST00000536797 DCCP43146 1447 aa30.2■■■□□ 2.42
LPCAT3-204ENST00000536797 CLSPNQ9HAW4 1339 aa30.18■■■□□ 2.42
LPCAT3-204ENST00000536797 FAM135BQ49AJ0 1406 aa30.16■■■□□ 2.42
LPCAT3-204ENST00000536797 DLC1Q96QB1 1528 aa30.15■■■□□ 2.42
LPCAT3-204ENST00000536797 WAPLQ7Z5K2 1190 aa30.15■■■□□ 2.42
LPCAT3-204ENST00000536797 SIRT1Q96EB6 747 aa30.15■■■□□ 2.42
LPCAT3-204ENST00000536797 SLAIN2Q9P270 581 aa30.14■■■□□ 2.42
LPCAT3-204ENST00000536797 CCER1Q8TC90 406 aaPredicted RBP30.12■■■□□ 2.41
LPCAT3-204ENST00000536797 PLEKHH1Q9ULM0 1364 aa30.12■■■□□ 2.41
LPCAT3-204ENST00000536797 TRAK1Q9UPV9 953 aa30.12■■■□□ 2.41
LPCAT3-204ENST00000536797 ROBO1Q9Y6N7 1651 aa30.1■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms