RNA–Protein interactions for RNA: ENST00000536515.5

LGR5-202, Transcript of leucine rich repeat containing G protein-coupled receptor 5, humanhuman

TSL 1 (best) BASIC

Gene LGR5, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5-202ENST00000536515 NOP58Q9Y2X3 529 aaKnown RBP17.43■□□□□ 0.38
LGR5-202ENST00000536515 ATP7AQ04656 1500 aa17.43■□□□□ 0.38
LGR5-202ENST00000536515 MLH3Q9UHC1 1453 aa17.42■□□□□ 0.38
LGR5-202ENST00000536515 KIDINS220Q9ULH0 1771 aa17.42■□□□□ 0.38
LGR5-202ENST00000536515 PAK3O75914 559 aaPredicted RBP17.41■□□□□ 0.38
LGR5-202ENST00000536515 AFAP1Q8N556 730 aa17.41■□□□□ 0.38
LGR5-202ENST00000536515 ANP32AP39687 249 aaKnown RBP17.39■□□□□ 0.37
LGR5-202ENST00000536515 SPAG9O60271 1321 aaKnown RBP17.39■□□□□ 0.37
LGR5-202ENST00000536515 BLMP54132 1417 aaPredicted RBP17.39■□□□□ 0.37
LGR5-202ENST00000536515 RNF17Q9BXT8 1623 aaKnown RBP17.38■□□□□ 0.37
LGR5-202ENST00000536515 BCL11AQ9H165 835 aa17.38■□□□□ 0.37
LGR5-202ENST00000536515 RAPGEF3O95398 923 aa17.37■□□□□ 0.37
LGR5-202ENST00000536515 PLIN1O60240 522 aa17.36■□□□□ 0.37
LGR5-202ENST00000536515 ABCA6Q8N139 1617 aa17.36■□□□□ 0.37
LGR5-202ENST00000536515 IPO9Q96P70 1041 aaKnown RBP17.35■□□□□ 0.37
LGR5-202ENST00000536515 INSRP06213 1382 aa17.35■□□□□ 0.37
LGR5-202ENST00000536515 ADAMTS8Q9UP79 889 aa17.34■□□□□ 0.37
LGR5-202ENST00000536515 MADDQ8WXG6 1647 aa17.34■□□□□ 0.37
LGR5-202ENST00000536515 DIP2CQ9Y2E4 1556 aa17.34■□□□□ 0.37
LGR5-202ENST00000536515 KNSTRNQ9Y448 316 aa17.34■□□□□ 0.37
LGR5-202ENST00000536515 ARHGEF40Q8TER5 1519 aa17.33■□□□□ 0.36
LGR5-202ENST00000536515 TCERG1O14776 1098 aaKnown RBP17.32■□□□□ 0.36
LGR5-202ENST00000536515 PPP2R1AP30153 589 aa17.32■□□□□ 0.36
LGR5-202ENST00000536515 NBR1Q14596 966 aa17.32■□□□□ 0.36
LGR5-202ENST00000536515 REREQ9P2R6 1566 aa17.31■□□□□ 0.36
LGR5-202ENST00000536515 IQGAP1P46940 1657 aa17.31■□□□□ 0.36
LGR5-202ENST00000536515 TRPM2O94759 1503 aa17.3■□□□□ 0.36
LGR5-202ENST00000536515 AMER1Q5JTC6 1135 aaPredicted RBP17.3■□□□□ 0.36
LGR5-202ENST00000536515 CRBNQ96SW2 442 aa17.3■□□□□ 0.36
LGR5-202ENST00000536515 YEATS2Q9ULM3 1422 aa17.29■□□□□ 0.36
LGR5-202ENST00000536515 ZBTB47Q9UFB7 747 aaPredicted RBP17.29■□□□□ 0.36
LGR5-202ENST00000536515 WDR43Q15061 677 aaKnown RBP eCLIP17.29■□□□□ 0.36
LGR5-202ENST00000536515 NPM2Q86SE8 214 aaKnown RBP17.29■□□□□ 0.36
LGR5-202ENST00000536515 SCAF11Q99590 1463 aaKnown RBP17.28■□□□□ 0.36
LGR5-202ENST00000536515 MYT1LQ9UL68 1186 aa17.28■□□□□ 0.36
LGR5-202ENST00000536515 CDCA8Q53HL2 280 aa17.28■□□□□ 0.36
LGR5-202ENST00000536515 CLTCL1P53675 1640 aa17.28■□□□□ 0.36
LGR5-202ENST00000536515 SPHKAPQ2M3C7 1700 aa17.28■□□□□ 0.36
LGR5-202ENST00000536515 PTPRTO14522 1441 aa17.28■□□□□ 0.36
LGR5-202ENST00000536515 PDE4AP27815 886 aa17.27■□□□□ 0.36
LGR5-202ENST00000536515 CEP152O94986 1710 aa17.27■□□□□ 0.35
LGR5-202ENST00000536515 PLEKHH1Q9ULM0 1364 aa17.26■□□□□ 0.35
LGR5-202ENST00000536515 C20orf194Q5TEA3 1177 aa17.25■□□□□ 0.35
LGR5-202ENST00000536515 STAC3Q96MF2 364 aa17.24■□□□□ 0.35
LGR5-202ENST00000536515 SYNMO15061 1565 aa17.24■□□□□ 0.35
LGR5-202ENST00000536515 KIF3BO15066 747 aa17.24■□□□□ 0.35
LGR5-202ENST00000536515 SKAP1Q86WV1 359 aa17.24■□□□□ 0.35
LGR5-202ENST00000536515 DEPDC5O75140 1603 aa17.24■□□□□ 0.35
LGR5-202ENST00000536515 DEKP35659 375 aaKnown RBP17.24■□□□□ 0.35
LGR5-202ENST00000536515 BACH2Q9BYV9 841 aa17.24■□□□□ 0.35
LGR5-202ENST00000536515 KANK1Q14678 1352 aa17.23■□□□□ 0.35
LGR5-202ENST00000536515 ASXL1Q8IXJ9 1541 aa17.23■□□□□ 0.35
LGR5-202ENST00000536515 MS4A1P11836 297 aa17.23■□□□□ 0.35
LGR5-202ENST00000536515 AGLP35573 1532 aa17.23■□□□□ 0.35
LGR5-202ENST00000536515 TET3O43151 1660 aa17.22■□□□□ 0.35
LGR5-202ENST00000536515 DUSP27Q5VZP5 1158 aa17.22■□□□□ 0.35
LGR5-202ENST00000536515 EIF3AQ14152 1382 aaKnown RBP17.21■□□□□ 0.35
LGR5-202ENST00000536515 CFAP70Q5T0N1 1121 aa17.2■□□□□ 0.34
LGR5-202ENST00000536515 GOLGA2Q08379 1002 aa17.2■□□□□ 0.34
LGR5-202ENST00000536515 SIGLEC1Q9BZZ2 1709 aa17.2■□□□□ 0.34
LGR5-202ENST00000536515 ZNF521Q96K83 1311 aa17.19■□□□□ 0.34
LGR5-202ENST00000536515 MYOM1P52179 1685 aa17.19■□□□□ 0.34
LGR5-202ENST00000536515 CCDC146Q8IYE0 955 aa17.19■□□□□ 0.34
LGR5-202ENST00000536515 PIK3C2GO75747 1445 aa17.19■□□□□ 0.34
LGR5-202ENST00000536515 UGGT1Q9NYU2 1555 aa17.18■□□□□ 0.34
LGR5-202ENST00000536515 MROH1Q8NDA8 1641 aa17.18■□□□□ 0.34
LGR5-202ENST00000536515 VWDEQ8N2E2 1590 aa17.17■□□□□ 0.34
LGR5-202ENST00000536515 ADGRF5Q8IZF2 1346 aa17.17■□□□□ 0.34
LGR5-202ENST00000536515 NPC1L1Q9UHC9 1359 aa17.17■□□□□ 0.34
LGR5-202ENST00000536515 KDM5AP29375 1690 aaKnown RBP17.15■□□□□ 0.34
LGR5-202ENST00000536515 SLFN5Q08AF3 891 aa17.14■□□□□ 0.34
LGR5-202ENST00000536515 KIAA1210Q9ULL0 1709 aa17.14■□□□□ 0.33
LGR5-202ENST00000536515 APAF1O14727 1248 aa17.14■□□□□ 0.33
LGR5-202ENST00000536515 RTL5Q5HYW3 569 aaPredicted RBP17.14■□□□□ 0.33
LGR5-202ENST00000536515 ERVK-7P63135 1459 aa17.14■□□□□ 0.33
LGR5-202ENST00000536515 KDM2BQ8NHM5 1336 aa17.14■□□□□ 0.33
LGR5-202ENST00000536515 CARD14Q9BXL6 1004 aa17.13■□□□□ 0.33
LGR5-202ENST00000536515 SPINK5Q9NQ38 1064 aaPredicted RBP17.13■□□□□ 0.33
LGR5-202ENST00000536515 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.12■□□□□ 0.33
LGR5-202ENST00000536515 MYOM2P54296 1465 aa17.11■□□□□ 0.33
LGR5-202ENST00000536515 ZC3H13Q5T200 1668 aaKnown RBP17.11■□□□□ 0.33
LGR5-202ENST00000536515 CENPQQ7L2Z9 268 aaPredicted RBP17.1■□□□□ 0.33
LGR5-202ENST00000536515 NEURL4Q96JN8 1562 aa17.1■□□□□ 0.33
LGR5-202ENST00000536515 LAS1LQ9Y4W2 734 aaKnown RBP17.1■□□□□ 0.33
LGR5-202ENST00000536515 LMTK2Q8IWU2 1503 aa17.1■□□□□ 0.33
LGR5-202ENST00000536515 SLC24A1O60721 1099 aa17.09■□□□□ 0.33
LGR5-202ENST00000536515 TRMT2AQ8IZ69 625 aaKnown RBP17.09■□□□□ 0.33
LGR5-202ENST00000536515 CHGAP10645 457 aaKnown RBP17.09■□□□□ 0.33
LGR5-202ENST00000536515 KIF1BO60333 1816 aa17.09■□□□□ 0.33
LGR5-202ENST00000536515 EFCAB6Q5THR3 1501 aa17.08■□□□□ 0.32
LGR5-202ENST00000536515 MROH2AA6NES4 1674 aa17.07■□□□□ 0.32
LGR5-202ENST00000536515 ABCC3O15438 1527 aa17.06■□□□□ 0.32
LGR5-202ENST00000536515 BCAR3O75815 825 aa17.06■□□□□ 0.32
LGR5-202ENST00000536515 DMRT2Q9Y5R5 561 aa17.06■□□□□ 0.32
LGR5-202ENST00000536515 NKTRP30414 1462 aaKnown RBP17.06■□□□□ 0.32
LGR5-202ENST00000536515 PPP6R1Q9UPN7 881 aa17.06■□□□□ 0.32
LGR5-202ENST00000536515 NOS1P29475 1434 aa17.05■□□□□ 0.32
LGR5-202ENST00000536515 E9PSI1 815 aa17.05■□□□□ 0.32
LGR5-202ENST00000536515 IFT172Q9UG01 1749 aa17.05■□□□□ 0.32
LGR5-202ENST00000536515 CENPJQ9HC77 1338 aaPredicted RBP17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms