RNA–Protein interactions for RNA: ENST00000536000.1

VPS37C-203, Transcript of VPS37C, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS37C, Length 915 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37C-203ENST00000536000 NUTM2DQ5VT03 806 aaPredicted RBP18.9■□□□□ 0.62
VPS37C-203ENST00000536000 SENP3Q9H4L4 574 aaPredicted RBP18.89■□□□□ 0.61
VPS37C-203ENST00000536000 RAB3GAP2Q9H2M9 1393 aa18.89■□□□□ 0.61
VPS37C-203ENST00000536000 TMEM131LA2VDJ0 1609 aa18.89■□□□□ 0.61
VPS37C-203ENST00000536000 SLC26A8Q96RN1 970 aa18.88■□□□□ 0.61
VPS37C-203ENST00000536000 SPHKAPQ2M3C7 1700 aa18.88■□□□□ 0.61
VPS37C-203ENST00000536000 MYO5BQ9ULV0 1848 aa18.87■□□□□ 0.61
VPS37C-203ENST00000536000 HRCP23327 699 aa18.86■□□□□ 0.61
VPS37C-203ENST00000536000 ZFYVE9O95405 1425 aa18.85■□□□□ 0.61
VPS37C-203ENST00000536000 PLEKHG1Q9ULL1 1385 aa18.83■□□□□ 0.61
VPS37C-203ENST00000536000 TRPM2O94759 1503 aa18.83■□□□□ 0.6
VPS37C-203ENST00000536000 CPS1P31327 1500 aa18.83■□□□□ 0.6
VPS37C-203ENST00000536000 IQSEC2Q5JU85 1478 aa18.83■□□□□ 0.6
VPS37C-203ENST00000536000 KCNA6P17658 529 aa18.82■□□□□ 0.6
VPS37C-203ENST00000536000 TBX22Q9Y458 520 aa18.82■□□□□ 0.6
VPS37C-203ENST00000536000 UBAP1LF5GYI3 381 aa18.81■□□□□ 0.6
VPS37C-203ENST00000536000 CLTCL1P53675 1640 aa18.8■□□□□ 0.6
VPS37C-203ENST00000536000 RPGRIP1LQ68CZ1 1315 aa18.78■□□□□ 0.6
VPS37C-203ENST00000536000 KIF1BO60333 1816 aa18.78■□□□□ 0.6
VPS37C-203ENST00000536000 CCDC144AA2RUR9 1427 aa18.77■□□□□ 0.6
VPS37C-203ENST00000536000 VGFO15240 615 aaPredicted RBP18.77■□□□□ 0.6
VPS37C-203ENST00000536000 TOM1O60784 492 aa18.77■□□□□ 0.6
VPS37C-203ENST00000536000 RGL3Q3MIN7 710 aa18.77■□□□□ 0.6
VPS37C-203ENST00000536000 PROSER2Q86WR7 435 aaPredicted RBP18.77■□□□□ 0.6
VPS37C-203ENST00000536000 STRCP1A6NGW2 1772 aa18.74■□□□□ 0.59
VPS37C-203ENST00000536000 LRRC7Q96NW7 1537 aa18.74■□□□□ 0.59
VPS37C-203ENST00000536000 ADAMTS13Q76LX8 1427 aa18.73■□□□□ 0.59
VPS37C-203ENST00000536000 SCAF1Q9H7N4 1312 aaKnown RBP18.71■□□□□ 0.59
VPS37C-203ENST00000536000 PIP4K2BP78356 416 aa18.7■□□□□ 0.58
VPS37C-203ENST00000536000 RBM33Q96EV2 1170 aaKnown RBP18.7■□□□□ 0.58
VPS37C-203ENST00000536000 AMOTL2Q9Y2J4 779 aa18.7■□□□□ 0.58
VPS37C-203ENST00000536000 PIK3R4Q99570 1358 aa18.69■□□□□ 0.58
VPS37C-203ENST00000536000 NEXMIFQ5QGS0 1516 aa18.69■□□□□ 0.58
VPS37C-203ENST00000536000 TMEM94Q12767 1356 aa18.68■□□□□ 0.58
VPS37C-203ENST00000536000 TRIM26Q12899 539 aaPredicted RBP18.67■□□□□ 0.58
VPS37C-203ENST00000536000 ANKRD30BQ9BXX2 1392 aa18.67■□□□□ 0.58
VPS37C-203ENST00000536000 SPATA31E1Q6ZUB1 1445 aa18.66■□□□□ 0.58
VPS37C-203ENST00000536000 CHD2O14647 1828 aaKnown RBP18.65■□□□□ 0.58
VPS37C-203ENST00000536000 DIP2AQ14689 1571 aa18.65■□□□□ 0.58
VPS37C-203ENST00000536000 C14orf37Q86TY3 774 aa18.64■□□□□ 0.57
VPS37C-203ENST00000536000 NKTRP30414 1462 aaKnown RBP18.64■□□□□ 0.57
VPS37C-203ENST00000536000 SETBP1Q9Y6X0 1596 aa18.64■□□□□ 0.57
VPS37C-203ENST00000536000 ADGRF5Q8IZF2 1346 aa18.63■□□□□ 0.57
VPS37C-203ENST00000536000 METP08581 1390 aa18.63■□□□□ 0.57
VPS37C-203ENST00000536000 NWD1Q149M9 1564 aa18.62■□□□□ 0.57
VPS37C-203ENST00000536000 PTPRUQ92729 1446 aa18.61■□□□□ 0.57
VPS37C-203ENST00000536000 MSH6P52701 1360 aa18.6■□□□□ 0.57
VPS37C-203ENST00000536000 PPLO60437 1756 aa18.6■□□□□ 0.57
VPS37C-203ENST00000536000 NRXN3Q9Y4C0 1643 aa18.6■□□□□ 0.57
VPS37C-203ENST00000536000 NCOA3Q9Y6Q9 1424 aa18.58■□□□□ 0.57
VPS37C-203ENST00000536000 XIRP1Q702N8 1843 aaKnown RBP18.58■□□□□ 0.57
VPS37C-203ENST00000536000 C19orf44Q9H6X5 657 aa18.58■□□□□ 0.56
VPS37C-203ENST00000536000 KDM2AQ9Y2K7 1162 aa18.57■□□□□ 0.56
VPS37C-203ENST00000536000 ALKQ9UM73 1620 aa18.56■□□□□ 0.56
VPS37C-203ENST00000536000 HSPA1LP34931 641 aa18.56■□□□□ 0.56
VPS37C-203ENST00000536000 DCAF11Q8TEB1 546 aa18.56■□□□□ 0.56
VPS37C-203ENST00000536000 ATF3P18847 181 aa18.55■□□□□ 0.56
VPS37C-203ENST00000536000 SLAIN2Q9P270 581 aa18.55■□□□□ 0.56
VPS37C-203ENST00000536000 CADPS2Q86UW7 1296 aa18.54■□□□□ 0.56
VPS37C-203ENST00000536000 STAC3Q96MF2 364 aa18.54■□□□□ 0.56
VPS37C-203ENST00000536000 TMEM132EQ6IEE7 984 aa18.53■□□□□ 0.56
VPS37C-203ENST00000536000 C14orf93Q9H972 538 aaKnown RBP18.53■□□□□ 0.56
VPS37C-203ENST00000536000 STK26Q9P289 416 aa18.52■□□□□ 0.56
VPS37C-203ENST00000536000 CFAP70Q5T0N1 1121 aa18.51■□□□□ 0.55
VPS37C-203ENST00000536000 FAM135BQ49AJ0 1406 aa18.5■□□□□ 0.55
VPS37C-203ENST00000536000 IFT172Q9UG01 1749 aa18.49■□□□□ 0.55
VPS37C-203ENST00000536000 XRN1Q8IZH2 1706 aaKnown RBP18.49■□□□□ 0.55
VPS37C-203ENST00000536000 PIK3C2GO75747 1445 aa18.49■□□□□ 0.55
VPS37C-203ENST00000536000 MYOM2P54296 1465 aa18.47■□□□□ 0.55
VPS37C-203ENST00000536000 SETD1AO15047 1707 aaKnown RBP18.46■□□□□ 0.55
VPS37C-203ENST00000536000 LRPPRCP42704 1394 aaKnown RBP18.46■□□□□ 0.55
VPS37C-203ENST00000536000 DHX57Q6P158 1386 aaKnown RBP18.46■□□□□ 0.55
VPS37C-203ENST00000536000 ROBO2Q9HCK4 1378 aa18.46■□□□□ 0.55
VPS37C-203ENST00000536000 SIN3AQ96ST3 1273 aa18.46■□□□□ 0.55
VPS37C-203ENST00000536000 ABCC11Q96J66 1382 aa18.45■□□□□ 0.54
VPS37C-203ENST00000536000 NEUROD1Q13562 356 aa18.45■□□□□ 0.54
VPS37C-203ENST00000536000 NRXN1Q9ULB1 1477 aa18.45■□□□□ 0.54
VPS37C-203ENST00000536000 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.44■□□□□ 0.54
VPS37C-203ENST00000536000 PTCH1Q13635 1447 aa18.44■□□□□ 0.54
VPS37C-203ENST00000536000 WAPLQ7Z5K2 1190 aa18.44■□□□□ 0.54
VPS37C-203ENST00000536000 SIRT1Q96EB6 747 aa18.43■□□□□ 0.54
VPS37C-203ENST00000536000 YTHDC2Q9H6S0 1430 aaKnown RBP18.42■□□□□ 0.54
VPS37C-203ENST00000536000 ADGRL3Q9HAR2 1447 aa18.42■□□□□ 0.54
VPS37C-203ENST00000536000 DCCP43146 1447 aa18.41■□□□□ 0.54
VPS37C-203ENST00000536000 PRAG1Q86YV5 1406 aa18.4■□□□□ 0.54
VPS37C-203ENST00000536000 L3MBTL2Q969R5 705 aa18.39■□□□□ 0.53
VPS37C-203ENST00000536000 ROBO1Q9Y6N7 1651 aa18.38■□□□□ 0.53
VPS37C-203ENST00000536000 BRINP3Q76B58 766 aa18.38■□□□□ 0.53
VPS37C-203ENST00000536000 POGKQ9P215 609 aa18.38■□□□□ 0.53
VPS37C-203ENST00000536000 TRAK1Q9UPV9 953 aa18.38■□□□□ 0.53
VPS37C-203ENST00000536000 TECPR2O15040 1411 aa18.38■□□□□ 0.53
VPS37C-203ENST00000536000 PCGF6Q9BYE7 350 aa18.37■□□□□ 0.53
VPS37C-203ENST00000536000 ASXL1Q8IXJ9 1541 aa18.37■□□□□ 0.53
VPS37C-203ENST00000536000 MST1RQ04912 1400 aa18.36■□□□□ 0.53
VPS37C-203ENST00000536000 PRAM1Q96QH2 718 aa18.36■□□□□ 0.53
VPS37C-203ENST00000536000 LAMC1P11047 1609 aa18.35■□□□□ 0.53
VPS37C-203ENST00000536000 PLEKHH1Q9ULM0 1364 aa18.35■□□□□ 0.53
VPS37C-203ENST00000536000 SAFB2Q14151 953 aaKnown RBP eCLIP18.35■□□□□ 0.53
VPS37C-203ENST00000536000 DISP3Q9P2K9 1392 aa18.34■□□□□ 0.53
VPS37C-203ENST00000536000 NALCNQ8IZF0 1738 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms