RNA–Protein interactions for RNA: ENST00000533717.5

PSMD13-213, Transcript of proteasome 26S subunit, non-ATPase 13, humanhuman

TSL 2

Gene PSMD13, Length 670 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD13-213ENST00000533717 RIMS2Q9UQ26 1411 aa23.21■■□□□ 1.31
PSMD13-213ENST00000533717 IQSEC2Q5JU85 1478 aa23.2■■□□□ 1.3
PSMD13-213ENST00000533717 RAB3GAP2Q9H2M9 1393 aa23.2■■□□□ 1.3
PSMD13-213ENST00000533717 ILDR1Q86SU0 546 aaPredicted RBP23.2■■□□□ 1.3
PSMD13-213ENST00000533717 STRCP1A6NGW2 1772 aa23.19■■□□□ 1.3
PSMD13-213ENST00000533717 CPS1P31327 1500 aa23.18■■□□□ 1.3
PSMD13-213ENST00000533717 HDGFP51858 240 aaKnown RBP23.18■■□□□ 1.3
PSMD13-213ENST00000533717 MPHOSPH9Q99550 1183 aa23.18■■□□□ 1.3
PSMD13-213ENST00000533717 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.15■■□□□ 1.3
PSMD13-213ENST00000533717 PLEKHG1Q9ULL1 1385 aa23.14■■□□□ 1.29
PSMD13-213ENST00000533717 PPP1R15AO75807 674 aaPredicted RBP23.13■■□□□ 1.29
PSMD13-213ENST00000533717 FOXD1Q16676 465 aa23.13■■□□□ 1.29
PSMD13-213ENST00000533717 HRCP23327 699 aa23.1■■□□□ 1.29
PSMD13-213ENST00000533717 BCANQ96GW7 911 aa23.1■■□□□ 1.29
PSMD13-213ENST00000533717 ZNF326Q5BKZ1 582 aaKnown RBP23.09■■□□□ 1.29
PSMD13-213ENST00000533717 SLC26A8Q96RN1 970 aa23.09■■□□□ 1.29
PSMD13-213ENST00000533717 NEXMIFQ5QGS0 1516 aa23.08■■□□□ 1.29
PSMD13-213ENST00000533717 NUTM2DQ5VT03 806 aaPredicted RBP23.08■■□□□ 1.29
PSMD13-213ENST00000533717 CHD2O14647 1828 aaKnown RBP23.08■■□□□ 1.28
PSMD13-213ENST00000533717 DIP2AQ14689 1571 aa23.07■■□□□ 1.28
PSMD13-213ENST00000533717 CCDC144AA2RUR9 1427 aa23.07■■□□□ 1.28
PSMD13-213ENST00000533717 PPLO60437 1756 aa23.06■■□□□ 1.28
PSMD13-213ENST00000533717 XIRP1Q702N8 1843 aaKnown RBP23.05■■□□□ 1.28
PSMD13-213ENST00000533717 LRRC7Q96NW7 1537 aa23.04■■□□□ 1.28
PSMD13-213ENST00000533717 NWD1Q149M9 1564 aa23.04■■□□□ 1.28
PSMD13-213ENST00000533717 NRXN3Q9Y4C0 1643 aa23.04■■□□□ 1.28
PSMD13-213ENST00000533717 SETBP1Q9Y6X0 1596 aa23.02■■□□□ 1.28
PSMD13-213ENST00000533717 ADAMTS13Q76LX8 1427 aa23.02■■□□□ 1.28
PSMD13-213ENST00000533717 TBX22Q9Y458 520 aa23.01■■□□□ 1.27
PSMD13-213ENST00000533717 IFT172Q9UG01 1749 aa23■■□□□ 1.27
PSMD13-213ENST00000533717 KCNA6P17658 529 aa23■■□□□ 1.27
PSMD13-213ENST00000533717 NKTRP30414 1462 aaKnown RBP22.98■■□□□ 1.27
PSMD13-213ENST00000533717 RPGRIP1LQ68CZ1 1315 aa22.98■■□□□ 1.27
PSMD13-213ENST00000533717 SPATA31E1Q6ZUB1 1445 aa22.97■■□□□ 1.27
PSMD13-213ENST00000533717 UBAP1LF5GYI3 381 aa22.96■■□□□ 1.27
PSMD13-213ENST00000533717 PIK3R4Q99570 1358 aa22.96■■□□□ 1.27
PSMD13-213ENST00000533717 VGFO15240 615 aaPredicted RBP22.94■■□□□ 1.26
PSMD13-213ENST00000533717 SETD1AO15047 1707 aaKnown RBP22.93■■□□□ 1.26
PSMD13-213ENST00000533717 ANKRD30BQ9BXX2 1392 aa22.92■■□□□ 1.26
PSMD13-213ENST00000533717 RGL3Q3MIN7 710 aa22.91■■□□□ 1.26
PSMD13-213ENST00000533717 PROSER2Q86WR7 435 aaPredicted RBP22.91■■□□□ 1.26
PSMD13-213ENST00000533717 ALKQ9UM73 1620 aa22.9■■□□□ 1.26
PSMD13-213ENST00000533717 TOM1O60784 492 aa22.9■■□□□ 1.26
PSMD13-213ENST00000533717 XRN1Q8IZH2 1706 aaKnown RBP22.9■■□□□ 1.26
PSMD13-213ENST00000533717 TMEM94Q12767 1356 aa22.89■■□□□ 1.26
PSMD13-213ENST00000533717 PTPRUQ92729 1446 aa22.87■■□□□ 1.25
PSMD13-213ENST00000533717 METP08581 1390 aa22.86■■□□□ 1.25
PSMD13-213ENST00000533717 TRIM26Q12899 539 aaPredicted RBP22.85■■□□□ 1.25
PSMD13-213ENST00000533717 RBM33Q96EV2 1170 aaKnown RBP22.84■■□□□ 1.25
PSMD13-213ENST00000533717 AMOTL2Q9Y2J4 779 aa22.84■■□□□ 1.25
PSMD13-213ENST00000533717 ADGRF5Q8IZF2 1346 aa22.82■■□□□ 1.24
PSMD13-213ENST00000533717 PIP4K2BP78356 416 aa22.82■■□□□ 1.24
PSMD13-213ENST00000533717 NCOA3Q9Y6Q9 1424 aa22.82■■□□□ 1.24
PSMD13-213ENST00000533717 SCAF1Q9H7N4 1312 aaKnown RBP22.81■■□□□ 1.24
PSMD13-213ENST00000533717 MYOM2P54296 1465 aa22.8■■□□□ 1.24
PSMD13-213ENST00000533717 MSH6P52701 1360 aa22.8■■□□□ 1.24
PSMD13-213ENST00000533717 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.79■■□□□ 1.24
PSMD13-213ENST00000533717 PIK3C2GO75747 1445 aa22.78■■□□□ 1.24
PSMD13-213ENST00000533717 LAMC1P11047 1609 aa22.78■■□□□ 1.24
PSMD13-213ENST00000533717 NRXN1Q9ULB1 1477 aa22.77■■□□□ 1.24
PSMD13-213ENST00000533717 C14orf37Q86TY3 774 aa22.74■■□□□ 1.23
PSMD13-213ENST00000533717 PRAG1Q86YV5 1406 aa22.74■■□□□ 1.23
PSMD13-213ENST00000533717 PTCH1Q13635 1447 aa22.73■■□□□ 1.23
PSMD13-213ENST00000533717 KNDC1Q76NI1 1749 aa22.72■■□□□ 1.23
PSMD13-213ENST00000533717 NALCNQ8IZF0 1738 aa22.72■■□□□ 1.23
PSMD13-213ENST00000533717 ASXL1Q8IXJ9 1541 aa22.72■■□□□ 1.23
PSMD13-213ENST00000533717 ROBO1Q9Y6N7 1651 aa22.71■■□□□ 1.23
PSMD13-213ENST00000533717 C19orf44Q9H6X5 657 aa22.71■■□□□ 1.23
PSMD13-213ENST00000533717 FAM135BQ49AJ0 1406 aa22.68■■□□□ 1.22
PSMD13-213ENST00000533717 DCAF11Q8TEB1 546 aa22.68■■□□□ 1.22
PSMD13-213ENST00000533717 STAC3Q96MF2 364 aa22.68■■□□□ 1.22
PSMD13-213ENST00000533717 C14orf93Q9H972 538 aaKnown RBP22.68■■□□□ 1.22
PSMD13-213ENST00000533717 DCCP43146 1447 aa22.67■■□□□ 1.22
PSMD13-213ENST00000533717 DHX57Q6P158 1386 aaKnown RBP22.67■■□□□ 1.22
PSMD13-213ENST00000533717 ROBO2Q9HCK4 1378 aa22.67■■□□□ 1.22
PSMD13-213ENST00000533717 HSPA1LP34931 641 aa22.67■■□□□ 1.22
PSMD13-213ENST00000533717 ADGRL3Q9HAR2 1447 aa22.66■■□□□ 1.22
PSMD13-213ENST00000533717 ATF3P18847 181 aa22.66■■□□□ 1.22
PSMD13-213ENST00000533717 CADPS2Q86UW7 1296 aa22.66■■□□□ 1.22
PSMD13-213ENST00000533717 SLAIN2Q9P270 581 aa22.66■■□□□ 1.22
PSMD13-213ENST00000533717 KDM2AQ9Y2K7 1162 aa22.66■■□□□ 1.22
PSMD13-213ENST00000533717 LRPPRCP42704 1394 aaKnown RBP22.65■■□□□ 1.22
PSMD13-213ENST00000533717 CFAP70Q5T0N1 1121 aa22.65■■□□□ 1.22
PSMD13-213ENST00000533717 TMEM132EQ6IEE7 984 aa22.65■■□□□ 1.22
PSMD13-213ENST00000533717 TECPR2O15040 1411 aa22.65■■□□□ 1.22
PSMD13-213ENST00000533717 YTHDC2Q9H6S0 1430 aaKnown RBP22.63■■□□□ 1.21
PSMD13-213ENST00000533717 ABCC11Q96J66 1382 aa22.63■■□□□ 1.21
PSMD13-213ENST00000533717 STK26Q9P289 416 aa22.62■■□□□ 1.21
PSMD13-213ENST00000533717 KIAA1210Q9ULL0 1709 aa22.6■■□□□ 1.21
PSMD13-213ENST00000533717 ADGRB1O14514 1584 aa22.59■■□□□ 1.21
PSMD13-213ENST00000533717 PHLPP1O60346 1717 aa22.59■■□□□ 1.21
PSMD13-213ENST00000533717 MST1RQ04912 1400 aa22.57■■□□□ 1.2
PSMD13-213ENST00000533717 SIN3AQ96ST3 1273 aa22.57■■□□□ 1.2
PSMD13-213ENST00000533717 CDC42BPGQ6DT37 1551 aa22.55■■□□□ 1.2
PSMD13-213ENST00000533717 DLC1Q96QB1 1528 aa22.54■■□□□ 1.2
PSMD13-213ENST00000533717 WAPLQ7Z5K2 1190 aa22.54■■□□□ 1.2
PSMD13-213ENST00000533717 SIRT1Q96EB6 747 aa22.54■■□□□ 1.2
PSMD13-213ENST00000533717 PLEKHH1Q9ULM0 1364 aa22.52■■□□□ 1.2
PSMD13-213ENST00000533717 NEUROD1Q13562 356 aa22.52■■□□□ 1.2
PSMD13-213ENST00000533717 AHDC1Q5TGY3 1603 aaPredicted RBP22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms