RNA–Protein interactions for RNA: ENST00000533717.5

PSMD13-213, Transcript of proteasome 26S subunit, non-ATPase 13, humanhuman

TSL 2

Gene PSMD13, Length 670 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD13-213ENST00000533717 NISCHQ9Y2I1 1504 aa38.02■■■■□ 3.68
PSMD13-213ENST00000533717 CCDC180Q9P1Z9 1646 aa33.91■■■■□ 3.02
PSMD13-213ENST00000533717 ABCC9O60706 1549 aa33.13■■■□□ 2.89
PSMD13-213ENST00000533717 RB1CC1Q8TDY2 1594 aa31.9■■■□□ 2.7
PSMD13-213ENST00000533717 NACADO15069 1562 aa31.84■■■□□ 2.69
PSMD13-213ENST00000533717 DCAF8L2P0C7V8 631 aa31.71■■■□□ 2.67
PSMD13-213ENST00000533717 ZCCHC6Q5VYS8 1495 aaKnown RBP31.65■■■□□ 2.66
PSMD13-213ENST00000533717 MYO15BQ96JP2 1530 aa31.62■■■□□ 2.65
PSMD13-213ENST00000533717 DCAF1Q9Y4B6 1507 aa31.47■■■□□ 2.63
PSMD13-213ENST00000533717 UNC13AQ9UPW8 1703 aa31.29■■■□□ 2.6
PSMD13-213ENST00000533717 BICRAQ9NZM4 1560 aa30.93■■■□□ 2.54
PSMD13-213ENST00000533717 PABPN1Q86U42 306 aaKnown RBP eCLIP30.9■■■□□ 2.54
PSMD13-213ENST00000533717 SCRIBQ14160 1630 aa30.87■■■□□ 2.53
PSMD13-213ENST00000533717 SHROOM4Q9ULL8 1493 aa30.6■■■□□ 2.49
PSMD13-213ENST00000533717 DNAJC5BQ9UF47 199 aa30.41■■■□□ 2.46
PSMD13-213ENST00000533717 EIF4G1Q04637 1599 aaKnown RBP30.11■■■□□ 2.41
PSMD13-213ENST00000533717 CC2D2AQ9P2K1 1620 aa30.02■■■□□ 2.4
PSMD13-213ENST00000533717 CECR2Q9BXF3 1484 aa29.78■■■□□ 2.36
PSMD13-213ENST00000533717 SMARCA4P51532 1647 aa29.55■■■□□ 2.32
PSMD13-213ENST00000533717 BAZ1AQ9NRL2 1556 aaPredicted RBP29.48■■■□□ 2.31
PSMD13-213ENST00000533717 SMARCA2P51531 1590 aa29.35■■■□□ 2.29
PSMD13-213ENST00000533717 ATAD2BQ9ULI0 1458 aa29.35■■■□□ 2.29
PSMD13-213ENST00000533717 NCAPD3P42695 1498 aa29.34■■■□□ 2.29
PSMD13-213ENST00000533717 MROH2BQ7Z745 1585 aa29.29■■■□□ 2.28
PSMD13-213ENST00000533717 PEG3Q9GZU2 1588 aa29.25■■■□□ 2.27
PSMD13-213ENST00000533717 HMGXB3Q12766 1538 aa29.23■■■□□ 2.27
PSMD13-213ENST00000533717 BAZ1BQ9UIG0 1483 aaKnown RBP29.11■■■□□ 2.25
PSMD13-213ENST00000533717 WIZO95785 1651 aa29.02■■■□□ 2.24
PSMD13-213ENST00000533717 RSF1Q96T23 1441 aaPredicted RBP28.9■■■□□ 2.22
PSMD13-213ENST00000533717 TOP2AP11388 1531 aaKnown RBP28.69■■■□□ 2.18
PSMD13-213ENST00000533717 NESP48681 1621 aa28.65■■■□□ 2.18
PSMD13-213ENST00000533717 LAMC3Q9Y6N6 1575 aa28.63■■■□□ 2.17
PSMD13-213ENST00000533717 ERCC6Q03468 1493 aa28.57■■■□□ 2.16
PSMD13-213ENST00000533717 CADPSQ9ULU8 1353 aa28.46■■■□□ 2.15
PSMD13-213ENST00000533717 KIF21AQ7Z4S6 1674 aa28.42■■■□□ 2.14
PSMD13-213ENST00000533717 PDS5BQ9NTI5 1447 aa28.38■■■□□ 2.13
PSMD13-213ENST00000533717 CCDC88BA6NC98 1476 aa28.31■■■□□ 2.12
PSMD13-213ENST00000533717 CUX2O14529 1486 aa28.3■■■□□ 2.12
PSMD13-213ENST00000533717 CFTRP13569 1480 aa28.3■■■□□ 2.12
PSMD13-213ENST00000533717 THOC2Q8NI27 1593 aaKnown RBP28.29■■■□□ 2.12
PSMD13-213ENST00000533717 PRDM2Q13029 1718 aa28.25■■■□□ 2.11
PSMD13-213ENST00000533717 FANCD2Q9BXW9 1451 aa28.16■■■□□ 2.1
PSMD13-213ENST00000533717 CEP164Q9UPV0 1460 aa28.15■■■□□ 2.1
PSMD13-213ENST00000533717 MRC2Q9UBG0 1479 aa28.11■■■□□ 2.09
PSMD13-213ENST00000533717 SUPT5HO00267 1087 aaKnown RBP28.09■■■□□ 2.09
PSMD13-213ENST00000533717 WDR62O43379 1518 aa28.04■■■□□ 2.08
PSMD13-213ENST00000533717 URB2Q14146 1524 aaKnown RBP27.89■■■□□ 2.06
PSMD13-213ENST00000533717 ABCC8Q09428 1581 aa27.73■■■□□ 2.03
PSMD13-213ENST00000533717 TOPBP1Q92547 1522 aa27.72■■■□□ 2.03
PSMD13-213ENST00000533717 DNMBPQ6XZF7 1577 aa27.7■■■□□ 2.03
PSMD13-213ENST00000533717 IFT140Q96RY7 1462 aa27.55■■■□□ 2
PSMD13-213ENST00000533717 CUX1P39880 1505 aa27.48■■□□□ 1.99
PSMD13-213ENST00000533717 POLA1P09884 1462 aaPredicted RBP27.47■■□□□ 1.99
PSMD13-213ENST00000533717 TARBP1Q13395 1621 aaKnown RBP27.46■■□□□ 1.99
PSMD13-213ENST00000533717 DNAJC5Q9H3Z4 198 aa27.45■■□□□ 1.98
PSMD13-213ENST00000533717 ZNF608Q9ULD9 1512 aaPredicted RBP27.42■■□□□ 1.98
PSMD13-213ENST00000533717 FGD5Q6ZNL6 1462 aa27.39■■□□□ 1.98
PSMD13-213ENST00000533717 EIF4G3O43432 1585 aaKnown RBP27.37■■□□□ 1.97
PSMD13-213ENST00000533717 SOGA1O94964 1423 aa27.33■■□□□ 1.97
PSMD13-213ENST00000533717 RAD54L2Q9Y4B4 1467 aa27.33■■□□□ 1.97
PSMD13-213ENST00000533717 BIVM-ERCC5R4GMW8 1640 aa27.3■■□□□ 1.96
PSMD13-213ENST00000533717 TOP2BQ02880 1626 aa27.27■■□□□ 1.96
PSMD13-213ENST00000533717 WRNQ14191 1432 aaPredicted RBP eCLIP27.26■■□□□ 1.95
PSMD13-213ENST00000533717 WDR97A6NE52 1622 aa27.26■■□□□ 1.95
PSMD13-213ENST00000533717 SYNJ1O43426 1573 aa27.24■■□□□ 1.95
PSMD13-213ENST00000533717 AQRO60306 1485 aaKnown RBP eCLIP27.24■■□□□ 1.953e-6■■■■□ 23.3
PSMD13-213ENST00000533717 AEBP2Q6ZN18 517 aaPredicted RBP27.17■■□□□ 1.94
PSMD13-213ENST00000533717 TDRD9Q8NDG6 1382 aaKnown RBP27.17■■□□□ 1.94
PSMD13-213ENST00000533717 ABCA10Q8WWZ4 1543 aa27.13■■□□□ 1.93
PSMD13-213ENST00000533717 PBRM1Q86U86 1689 aa27.09■■□□□ 1.93
PSMD13-213ENST00000533717 CHD1O14646 1710 aa27.09■■□□□ 1.93
PSMD13-213ENST00000533717 OSCARQ8IYS5 282 aa27.08■■□□□ 1.93
PSMD13-213ENST00000533717 ABCA5Q8WWZ7 1642 aa27.08■■□□□ 1.93
PSMD13-213ENST00000533717 GRIN2BQ13224 1484 aa27.05■■□□□ 1.92
PSMD13-213ENST00000533717 GAPVD1Q14C86 1478 aa27.04■■□□□ 1.92
PSMD13-213ENST00000533717 SNAPC4Q5SXM2 1469 aa27.01■■□□□ 1.91
PSMD13-213ENST00000533717 MAGI1Q96QZ7 1491 aaPredicted RBP26.99■■□□□ 1.91
PSMD13-213ENST00000533717 FBLN2P98095 1184 aa26.91■■□□□ 1.9
PSMD13-213ENST00000533717 SYNJ2O15056 1496 aa26.88■■□□□ 1.89
PSMD13-213ENST00000533717 CHMP7Q8WUX9 453 aaPredicted RBP26.83■■□□□ 1.89
PSMD13-213ENST00000533717 ERICH3Q5RHP9 1530 aa26.82■■□□□ 1.88
PSMD13-213ENST00000533717 ADAMTS12P58397 1594 aa26.8■■□□□ 1.88
PSMD13-213ENST00000533717 RIMBP3CA6NJZ7 1639 aa26.73■■□□□ 1.87
PSMD13-213ENST00000533717 RIMBP3BA6NNM3 1639 aa26.73■■□□□ 1.87
PSMD13-213ENST00000533717 RIMBP3Q9UFD9 1639 aa26.73■■□□□ 1.87
PSMD13-213ENST00000533717 CLASP1Q7Z460 1538 aa26.72■■□□□ 1.87
PSMD13-213ENST00000533717 FHAD1B1AJZ9 1412 aa26.72■■□□□ 1.87
PSMD13-213ENST00000533717 GRIN2AQ12879 1464 aa26.7■■□□□ 1.87
PSMD13-213ENST00000533717 KIF27Q86VH2 1401 aa26.7■■□□□ 1.86
PSMD13-213ENST00000533717 ARHGEF11O15085 1522 aa26.68■■□□□ 1.86
PSMD13-213ENST00000533717 CUL7Q14999 1698 aa26.61■■□□□ 1.85
PSMD13-213ENST00000533717 CEP170Q5SW79 1584 aa26.59■■□□□ 1.85
PSMD13-213ENST00000533717 IGF1RP08069 1367 aa26.58■■□□□ 1.84
PSMD13-213ENST00000533717 NUP160Q12769 1436 aa26.57■■□□□ 1.84
PSMD13-213ENST00000533717 TRIM41Q8WV44 630 aa26.54■■□□□ 1.84
PSMD13-213ENST00000533717 CHIC1Q5VXU3 224 aa26.49■■□□□ 1.83
PSMD13-213ENST00000533717 ARAP1Q96P48 1450 aa26.45■■□□□ 1.82
PSMD13-213ENST00000533717 SHROOM2Q13796 1616 aa26.44■■□□□ 1.82
PSMD13-213ENST00000533717 RUSC2Q8N2Y8 1516 aa26.44■■□□□ 1.82
PSMD13-213ENST00000533717 CARMIL1Q5VZK9 1371 aa26.42■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms