RNA–Protein interactions for RNA: ENST00000533595.5

SF3B2-214, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 5

Gene SF3B2, Length 1,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-214ENST00000533595 RIMS2Q9UQ26 1411 aa21.35■■□□□ 1.01
SF3B2-214ENST00000533595 NEURL4Q96JN8 1562 aa21.35■■□□□ 1.01
SF3B2-214ENST00000533595 ZFYVE9O95405 1425 aa21.34■■□□□ 1.01
SF3B2-214ENST00000533595 DHX57Q6P158 1386 aaKnown RBP21.34■■□□□ 1.01
SF3B2-214ENST00000533595 MED14O60244 1454 aa21.33■■□□□ 1.01
SF3B2-214ENST00000533595 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.33■■□□□ 1.01
SF3B2-214ENST00000533595 NPHP4O75161 1426 aaPredicted RBP21.32■■□□□ 1
SF3B2-214ENST00000533595 SPATA31E1Q6ZUB1 1445 aa21.3■■□□□ 1
SF3B2-214ENST00000533595 PPP1R15AO75807 674 aaPredicted RBP21.3■■□□□ 1
SF3B2-214ENST00000533595 IQGAP1P46940 1657 aa21.28■■□□□ 1
SF3B2-214ENST00000533595 RGL3Q3MIN7 710 aa21.28■■□□□ 1
SF3B2-214ENST00000533595 NUTM2DQ5VT03 806 aaPredicted RBP21.28■■□□□ 1
SF3B2-214ENST00000533595 RPGRIP1LQ68CZ1 1315 aa21.28■■□□□ 1
SF3B2-214ENST00000533595 NEXMIFQ5QGS0 1516 aa21.26■□□□□ 0.99
SF3B2-214ENST00000533595 PLEKHG1Q9ULL1 1385 aa21.25■□□□□ 0.99
SF3B2-214ENST00000533595 BCANQ96GW7 911 aa21.25■□□□□ 0.99
SF3B2-214ENST00000533595 FBXO41Q8TF61 875 aa21.24■□□□□ 0.99
SF3B2-214ENST00000533595 VGFO15240 615 aaPredicted RBP21.22■□□□□ 0.99
SF3B2-214ENST00000533595 PPLO60437 1756 aa21.21■□□□□ 0.99
SF3B2-214ENST00000533595 SENP3Q9H4L4 574 aaPredicted RBP21.21■□□□□ 0.99
SF3B2-214ENST00000533595 SLC26A8Q96RN1 970 aa21.19■□□□□ 0.98
SF3B2-214ENST00000533595 SIN3AQ96ST3 1273 aa21.18■□□□□ 0.98
SF3B2-214ENST00000533595 IFT172Q9UG01 1749 aa21.17■□□□□ 0.98
SF3B2-214ENST00000533595 ZNF335Q9H4Z2 1342 aaPredicted RBP21.16■□□□□ 0.98
SF3B2-214ENST00000533595 SETBP1Q9Y6X0 1596 aa21.15■□□□□ 0.98
SF3B2-214ENST00000533595 ADAMTS13Q76LX8 1427 aa21.15■□□□□ 0.98
SF3B2-214ENST00000533595 NEUROD1Q13562 356 aa21.15■□□□□ 0.98
SF3B2-214ENST00000533595 TBX22Q9Y458 520 aa21.15■□□□□ 0.98
SF3B2-214ENST00000533595 ADGRF5Q8IZF2 1346 aa21.14■□□□□ 0.97
SF3B2-214ENST00000533595 DIP2AQ14689 1571 aa21.14■□□□□ 0.97
SF3B2-214ENST00000533595 DCAF11Q8TEB1 546 aa21.13■□□□□ 0.97
SF3B2-214ENST00000533595 NRXN3Q9Y4C0 1643 aa21.13■□□□□ 0.97
SF3B2-214ENST00000533595 MYOM2P54296 1465 aa21.12■□□□□ 0.97
SF3B2-214ENST00000533595 STAC3Q96MF2 364 aa21.11■□□□□ 0.97
SF3B2-214ENST00000533595 KDM2AQ9Y2K7 1162 aa21.1■□□□□ 0.97
SF3B2-214ENST00000533595 LTBP4Q8N2S1 1624 aa21.1■□□□□ 0.97
SF3B2-214ENST00000533595 CLSPNQ9HAW4 1339 aa21.08■□□□□ 0.97
SF3B2-214ENST00000533595 NRXN1Q9ULB1 1477 aa21.08■□□□□ 0.97
SF3B2-214ENST00000533595 PIK3C2GO75747 1445 aa21.08■□□□□ 0.97
SF3B2-214ENST00000533595 KCNA6P17658 529 aa21.08■□□□□ 0.97
SF3B2-214ENST00000533595 PIK3R4Q99570 1358 aa21.08■□□□□ 0.96
SF3B2-214ENST00000533595 CCER1Q8TC90 406 aaPredicted RBP21.07■□□□□ 0.96
SF3B2-214ENST00000533595 ALKQ9UM73 1620 aa21.07■□□□□ 0.96
SF3B2-214ENST00000533595 L3MBTL2Q969R5 705 aa21.06■□□□□ 0.96
SF3B2-214ENST00000533595 CPS1P31327 1500 aa21.05■□□□□ 0.96
SF3B2-214ENST00000533595 METP08581 1390 aa21.05■□□□□ 0.96
SF3B2-214ENST00000533595 STRCP1A6NGW2 1772 aa21.05■□□□□ 0.96
SF3B2-214ENST00000533595 CHD2O14647 1828 aaKnown RBP21.04■□□□□ 0.96
SF3B2-214ENST00000533595 SETD1AO15047 1707 aaKnown RBP21.03■□□□□ 0.96
SF3B2-214ENST00000533595 NWD1Q149M9 1564 aa21.02■□□□□ 0.96
SF3B2-214ENST00000533595 CERKQ8TCT0 537 aa21.02■□□□□ 0.96
SF3B2-214ENST00000533595 C14orf93Q9H972 538 aaKnown RBP21.02■□□□□ 0.96
SF3B2-214ENST00000533595 TONSLQ96HA7 1378 aa21.01■□□□□ 0.95
SF3B2-214ENST00000533595 AMOTL2Q9Y2J4 779 aa21.01■□□□□ 0.95
SF3B2-214ENST00000533595 PTPRUQ92729 1446 aa21.01■□□□□ 0.95
SF3B2-214ENST00000533595 CFAP70Q5T0N1 1121 aa21■□□□□ 0.95
SF3B2-214ENST00000533595 NKTRP30414 1462 aaKnown RBP21■□□□□ 0.95
SF3B2-214ENST00000533595 LAMC1P11047 1609 aa21■□□□□ 0.95
SF3B2-214ENST00000533595 LRRC7Q96NW7 1537 aa20.98■□□□□ 0.95
SF3B2-214ENST00000533595 PROSER2Q86WR7 435 aaPredicted RBP20.97■□□□□ 0.95
SF3B2-214ENST00000533595 PRAG1Q86YV5 1406 aa20.96■□□□□ 0.95
SF3B2-214ENST00000533595 XRN1Q8IZH2 1706 aaKnown RBP20.96■□□□□ 0.95
SF3B2-214ENST00000533595 TMEM132EQ6IEE7 984 aa20.96■□□□□ 0.95
SF3B2-214ENST00000533595 IQSEC2Q5JU85 1478 aa20.94■□□□□ 0.94
SF3B2-214ENST00000533595 ASXL1Q8IXJ9 1541 aa20.94■□□□□ 0.94
SF3B2-214ENST00000533595 TMEM94Q12767 1356 aa20.93■□□□□ 0.94
SF3B2-214ENST00000533595 STK26Q9P289 416 aa20.92■□□□□ 0.94
SF3B2-214ENST00000533595 LRPPRCP42704 1394 aaKnown RBP20.92■□□□□ 0.94
SF3B2-214ENST00000533595 RBM33Q96EV2 1170 aaKnown RBP20.91■□□□□ 0.94
SF3B2-214ENST00000533595 YTHDC2Q9H6S0 1430 aaKnown RBP20.91■□□□□ 0.94
SF3B2-214ENST00000533595 TIMELESSQ9UNS1 1208 aa20.91■□□□□ 0.94
SF3B2-214ENST00000533595 KIAA1210Q9ULL0 1709 aa20.9■□□□□ 0.94
SF3B2-214ENST00000533595 PTCH1Q13635 1447 aa20.9■□□□□ 0.94
SF3B2-214ENST00000533595 ABCC11Q96J66 1382 aa20.9■□□□□ 0.94
SF3B2-214ENST00000533595 ADGRB1O14514 1584 aa20.89■□□□□ 0.94
SF3B2-214ENST00000533595 XIRP1Q702N8 1843 aaKnown RBP20.89■□□□□ 0.93
SF3B2-214ENST00000533595 TECPR2O15040 1411 aa20.88■□□□□ 0.93
SF3B2-214ENST00000533595 ROBO2Q9HCK4 1378 aa20.88■□□□□ 0.93
SF3B2-214ENST00000533595 NCOA3Q9Y6Q9 1424 aa20.87■□□□□ 0.93
SF3B2-214ENST00000533595 NBPF8Q3BBV2 869 aa20.86■□□□□ 0.93
SF3B2-214ENST00000533595 C14orf37Q86TY3 774 aa20.86■□□□□ 0.93
SF3B2-214ENST00000533595 KNDC1Q76NI1 1749 aa20.86■□□□□ 0.93
SF3B2-214ENST00000533595 NBPF1Q3BBV0 1214 aa20.85■□□□□ 0.93
SF3B2-214ENST00000533595 TRPM1Q7Z4N2 1603 aa20.84■□□□□ 0.93
SF3B2-214ENST00000533595 MSH6P52701 1360 aa20.84■□□□□ 0.93
SF3B2-214ENST00000533595 SIRT1Q96EB6 747 aa20.83■□□□□ 0.93
SF3B2-214ENST00000533595 FAM135BQ49AJ0 1406 aa20.82■□□□□ 0.92
SF3B2-214ENST00000533595 UBAP1LF5GYI3 381 aa20.82■□□□□ 0.92
SF3B2-214ENST00000533595 TRAK1Q9UPV9 953 aa20.82■□□□□ 0.92
SF3B2-214ENST00000533595 WAPLQ7Z5K2 1190 aa20.81■□□□□ 0.92
SF3B2-214ENST00000533595 C19orf44Q9H6X5 657 aa20.81■□□□□ 0.92
SF3B2-214ENST00000533595 DLC1Q96QB1 1528 aa20.81■□□□□ 0.92
SF3B2-214ENST00000533595 ROCK2O75116 1388 aaKnown RBP20.81■□□□□ 0.92
SF3B2-214ENST00000533595 TOM1O60784 492 aa20.8■□□□□ 0.92
SF3B2-214ENST00000533595 ADGRL3Q9HAR2 1447 aa20.79■□□□□ 0.92
SF3B2-214ENST00000533595 PRAM1Q96QH2 718 aa20.79■□□□□ 0.92
SF3B2-214ENST00000533595 RALGAPBQ86X10 1494 aa20.78■□□□□ 0.92
SF3B2-214ENST00000533595 PLEKHH1Q9ULM0 1364 aa20.78■□□□□ 0.92
SF3B2-214ENST00000533595 POGKQ9P215 609 aa20.78■□□□□ 0.92
SF3B2-214ENST00000533595 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms