RNA–Protein interactions for RNA: ENST00000533572.5

CTSB-229, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-229ENST00000533572 CPS1P31327 1500 aa25.47■■□□□ 1.67
CTSB-229ENST00000533572 TMEM131LA2VDJ0 1609 aa25.46■■□□□ 1.67
CTSB-229ENST00000533572 BCANQ96GW7 911 aa25.45■■□□□ 1.66
CTSB-229ENST00000533572 MYO5BQ9ULV0 1848 aa25.44■■□□□ 1.66
CTSB-229ENST00000533572 RIMS2Q9UQ26 1411 aa25.44■■□□□ 1.66
CTSB-229ENST00000533572 DISP3Q9P2K9 1392 aa25.44■■□□□ 1.66
CTSB-229ENST00000533572 ILDR2Q71H61 639 aa25.43■■□□□ 1.66
CTSB-229ENST00000533572 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.42■■□□□ 1.66
CTSB-229ENST00000533572 TRPM2O94759 1503 aa25.4■■□□□ 1.66
CTSB-229ENST00000533572 ZFYVE9O95405 1425 aa25.39■■□□□ 1.66
CTSB-229ENST00000533572 PLEKHG1Q9ULL1 1385 aa25.36■■□□□ 1.65
CTSB-229ENST00000533572 ZNF326Q5BKZ1 582 aaKnown RBP25.36■■□□□ 1.65
CTSB-229ENST00000533572 SLC26A8Q96RN1 970 aa25.36■■□□□ 1.65
CTSB-229ENST00000533572 UBAP1LF5GYI3 381 aa25.35■■□□□ 1.65
CTSB-229ENST00000533572 CLTCL1P53675 1640 aa25.34■■□□□ 1.65
CTSB-229ENST00000533572 SENP3Q9H4L4 574 aaPredicted RBP25.34■■□□□ 1.65
CTSB-229ENST00000533572 NUTM2DQ5VT03 806 aaPredicted RBP25.33■■□□□ 1.65
CTSB-229ENST00000533572 SOCS7O14512 581 aa25.32■■□□□ 1.64
CTSB-229ENST00000533572 MPHOSPH9Q99550 1183 aa25.31■■□□□ 1.64
CTSB-229ENST00000533572 STRCP1A6NGW2 1772 aa25.3■■□□□ 1.64
CTSB-229ENST00000533572 KIF1BO60333 1816 aa25.3■■□□□ 1.64
CTSB-229ENST00000533572 LRRC7Q96NW7 1537 aa25.28■■□□□ 1.64
CTSB-229ENST00000533572 FOXD1Q16676 465 aa25.28■■□□□ 1.64
CTSB-229ENST00000533572 TOM1O60784 492 aa25.27■■□□□ 1.64
CTSB-229ENST00000533572 KCNA6P17658 529 aa25.27■■□□□ 1.64
CTSB-229ENST00000533572 CCDC144AA2RUR9 1427 aa25.24■■□□□ 1.63
CTSB-229ENST00000533572 TBX22Q9Y458 520 aa25.24■■□□□ 1.63
CTSB-229ENST00000533572 DIP2AQ14689 1571 aa25.23■■□□□ 1.63
CTSB-229ENST00000533572 SCAF1Q9H7N4 1312 aaKnown RBP25.23■■□□□ 1.63
CTSB-229ENST00000533572 NKTRP30414 1462 aaKnown RBP25.21■■□□□ 1.63
CTSB-229ENST00000533572 NWD1Q149M9 1564 aa25.2■■□□□ 1.62
CTSB-229ENST00000533572 PROSER2Q86WR7 435 aaPredicted RBP25.2■■□□□ 1.62
CTSB-229ENST00000533572 ADAMTS13Q76LX8 1427 aa25.2■■□□□ 1.62
CTSB-229ENST00000533572 NEXMIFQ5QGS0 1516 aa25.19■■□□□ 1.62
CTSB-229ENST00000533572 PIP4K2BP78356 416 aa25.19■■□□□ 1.62
CTSB-229ENST00000533572 TMEM94Q12767 1356 aa25.17■■□□□ 1.62
CTSB-229ENST00000533572 PIK3R4Q99570 1358 aa25.17■■□□□ 1.62
CTSB-229ENST00000533572 RPGRIP1LQ68CZ1 1315 aa25.16■■□□□ 1.62
CTSB-229ENST00000533572 SETBP1Q9Y6X0 1596 aa25.15■■□□□ 1.62
CTSB-229ENST00000533572 VGFO15240 615 aaPredicted RBP25.15■■□□□ 1.62
CTSB-229ENST00000533572 CHD2O14647 1828 aaKnown RBP25.14■■□□□ 1.62
CTSB-229ENST00000533572 DHX57Q6P158 1386 aaKnown RBP25.13■■□□□ 1.61
CTSB-229ENST00000533572 XIRP1Q702N8 1843 aaKnown RBP25.1■■□□□ 1.61
CTSB-229ENST00000533572 RGL3Q3MIN7 710 aa25.1■■□□□ 1.61
CTSB-229ENST00000533572 NRXN3Q9Y4C0 1643 aa25.1■■□□□ 1.61
CTSB-229ENST00000533572 RBM33Q96EV2 1170 aaKnown RBP25.09■■□□□ 1.61
CTSB-229ENST00000533572 MSH6P52701 1360 aa25.08■■□□□ 1.61
CTSB-229ENST00000533572 C14orf37Q86TY3 774 aa25.08■■□□□ 1.61
CTSB-229ENST00000533572 AMOTL2Q9Y2J4 779 aa25.08■■□□□ 1.61
CTSB-229ENST00000533572 PPLO60437 1756 aa25.07■■□□□ 1.6
CTSB-229ENST00000533572 SPATA31E1Q6ZUB1 1445 aa25.05■■□□□ 1.6
CTSB-229ENST00000533572 ALKQ9UM73 1620 aa25.04■■□□□ 1.6
CTSB-229ENST00000533572 CLSPNQ9HAW4 1339 aa25.04■■□□□ 1.6
CTSB-229ENST00000533572 ANKRD30BQ9BXX2 1392 aa25.04■■□□□ 1.6
CTSB-229ENST00000533572 METP08581 1390 aa25.03■■□□□ 1.6
CTSB-229ENST00000533572 PTPRUQ92729 1446 aa25.03■■□□□ 1.6
CTSB-229ENST00000533572 NCOA3Q9Y6Q9 1424 aa25.03■■□□□ 1.6
CTSB-229ENST00000533572 HSPA1LP34931 641 aa25■■□□□ 1.59
CTSB-229ENST00000533572 XRN1Q8IZH2 1706 aaKnown RBP24.99■■□□□ 1.59
CTSB-229ENST00000533572 ADGRF5Q8IZF2 1346 aa24.97■■□□□ 1.59
CTSB-229ENST00000533572 CCER1Q8TC90 406 aaPredicted RBP24.97■■□□□ 1.59
CTSB-229ENST00000533572 IFT172Q9UG01 1749 aa24.96■■□□□ 1.59
CTSB-229ENST00000533572 ATF3P18847 181 aa24.94■■□□□ 1.58
CTSB-229ENST00000533572 C19orf44Q9H6X5 657 aa24.94■■□□□ 1.58
CTSB-229ENST00000533572 CADPS2Q86UW7 1296 aa24.93■■□□□ 1.58
CTSB-229ENST00000533572 FAM135BQ49AJ0 1406 aa24.93■■□□□ 1.58
CTSB-229ENST00000533572 SETD1AO15047 1707 aaKnown RBP24.92■■□□□ 1.58
CTSB-229ENST00000533572 SLAIN2Q9P270 581 aa24.91■■□□□ 1.58
CTSB-229ENST00000533572 PIK3C2GO75747 1445 aa24.89■■□□□ 1.58
CTSB-229ENST00000533572 PTCH1Q13635 1447 aa24.89■■□□□ 1.58
CTSB-229ENST00000533572 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.89■■□□□ 1.57
CTSB-229ENST00000533572 MYOM2P54296 1465 aa24.89■■□□□ 1.57
CTSB-229ENST00000533572 ROBO1Q9Y6N7 1651 aa24.87■■□□□ 1.57
CTSB-229ENST00000533572 DCCP43146 1447 aa24.86■■□□□ 1.57
CTSB-229ENST00000533572 ADGRL3Q9HAR2 1447 aa24.85■■□□□ 1.57
CTSB-229ENST00000533572 PRAG1Q86YV5 1406 aa24.84■■□□□ 1.57
CTSB-229ENST00000533572 ROBO2Q9HCK4 1378 aa24.83■■□□□ 1.57
CTSB-229ENST00000533572 STK26Q9P289 416 aa24.83■■□□□ 1.57
CTSB-229ENST00000533572 NRXN1Q9ULB1 1477 aa24.82■■□□□ 1.56
CTSB-229ENST00000533572 DCAF11Q8TEB1 546 aa24.81■■□□□ 1.56
CTSB-229ENST00000533572 KDM2AQ9Y2K7 1162 aa24.81■■□□□ 1.56
CTSB-229ENST00000533572 LAMC1P11047 1609 aa24.81■■□□□ 1.56
CTSB-229ENST00000533572 LRPPRCP42704 1394 aaKnown RBP24.8■■□□□ 1.56
CTSB-229ENST00000533572 TMEM132EQ6IEE7 984 aa24.8■■□□□ 1.56
CTSB-229ENST00000533572 STAC3Q96MF2 364 aa24.8■■□□□ 1.56
CTSB-229ENST00000533572 SIN3AQ96ST3 1273 aa24.8■■□□□ 1.56
CTSB-229ENST00000533572 C14orf93Q9H972 538 aaKnown RBP24.8■■□□□ 1.56
CTSB-229ENST00000533572 TIMELESSQ9UNS1 1208 aa24.79■■□□□ 1.56
CTSB-229ENST00000533572 NALCNQ8IZF0 1738 aa24.78■■□□□ 1.56
CTSB-229ENST00000533572 NEUROD1Q13562 356 aa24.78■■□□□ 1.56
CTSB-229ENST00000533572 CFAP70Q5T0N1 1121 aa24.78■■□□□ 1.56
CTSB-229ENST00000533572 ASXL1Q8IXJ9 1541 aa24.77■■□□□ 1.56
CTSB-229ENST00000533572 YTHDC2Q9H6S0 1430 aaKnown RBP24.77■■□□□ 1.56
CTSB-229ENST00000533572 ABCC11Q96J66 1382 aa24.76■■□□□ 1.55
CTSB-229ENST00000533572 TECPR2O15040 1411 aa24.76■■□□□ 1.55
CTSB-229ENST00000533572 TONSLQ96HA7 1378 aa24.74■■□□□ 1.55
CTSB-229ENST00000533572 MST1RQ04912 1400 aa24.74■■□□□ 1.55
CTSB-229ENST00000533572 PHLPP1O60346 1717 aa24.74■■□□□ 1.55
CTSB-229ENST00000533572 KNDC1Q76NI1 1749 aa24.74■■□□□ 1.55
CTSB-229ENST00000533572 MED1Q15648 1581 aaPredicted RBP24.71■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 109.5 ms