RNA–Protein interactions for RNA: ENST00000531668.1

CAPRIN1-210, Transcript of cell cycle associated protein 1, humanhuman

TSL 3

Gene CAPRIN1, Length 479 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-210ENST00000531668 MED14O60244 1454 aa25.23■■□□□ 1.63
CAPRIN1-210ENST00000531668 RIMS2Q9UQ26 1411 aa25.23■■□□□ 1.63
CAPRIN1-210ENST00000531668 TRPM2O94759 1503 aa25.22■■□□□ 1.63
CAPRIN1-210ENST00000531668 CLTCL1P53675 1640 aa25.21■■□□□ 1.63
CAPRIN1-210ENST00000531668 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.19■■□□□ 1.62
CAPRIN1-210ENST00000531668 SLC26A8Q96RN1 970 aa25.19■■□□□ 1.62
CAPRIN1-210ENST00000531668 KIF1BO60333 1816 aa25.16■■□□□ 1.62
CAPRIN1-210ENST00000531668 ZFYVE9O95405 1425 aa25.15■■□□□ 1.62
CAPRIN1-210ENST00000531668 LTBP4Q8N2S1 1624 aa25.15■■□□□ 1.62
CAPRIN1-210ENST00000531668 CCDC144AA2RUR9 1427 aa25.14■■□□□ 1.62
CAPRIN1-210ENST00000531668 HRCP23327 699 aa25.14■■□□□ 1.62
CAPRIN1-210ENST00000531668 TRIM26Q12899 539 aaPredicted RBP25.14■■□□□ 1.62
CAPRIN1-210ENST00000531668 RGL3Q3MIN7 710 aa25.12■■□□□ 1.61
CAPRIN1-210ENST00000531668 ILDR1Q86SU0 546 aaPredicted RBP25.1■■□□□ 1.61
CAPRIN1-210ENST00000531668 PLEKHG1Q9ULL1 1385 aa25.09■■□□□ 1.61
CAPRIN1-210ENST00000531668 FBXO41Q8TF61 875 aa25.07■■□□□ 1.6
CAPRIN1-210ENST00000531668 CPS1P31327 1500 aa25.02■■□□□ 1.6
CAPRIN1-210ENST00000531668 STRCP1A6NGW2 1772 aa25.01■■□□□ 1.59
CAPRIN1-210ENST00000531668 NEXMIFQ5QGS0 1516 aa25.01■■□□□ 1.59
CAPRIN1-210ENST00000531668 VGFO15240 615 aaPredicted RBP25■■□□□ 1.59
CAPRIN1-210ENST00000531668 RPGRIP1LQ68CZ1 1315 aa25■■□□□ 1.59
CAPRIN1-210ENST00000531668 KCNA6P17658 529 aa24.99■■□□□ 1.59
CAPRIN1-210ENST00000531668 TBX22Q9Y458 520 aa24.99■■□□□ 1.59
CAPRIN1-210ENST00000531668 ANKRD30BQ9BXX2 1392 aa24.98■■□□□ 1.59
CAPRIN1-210ENST00000531668 ADAMTS13Q76LX8 1427 aa24.97■■□□□ 1.59
CAPRIN1-210ENST00000531668 UBAP1LF5GYI3 381 aa24.97■■□□□ 1.59
CAPRIN1-210ENST00000531668 PROSER2Q86WR7 435 aaPredicted RBP24.97■■□□□ 1.59
CAPRIN1-210ENST00000531668 RBM33Q96EV2 1170 aaKnown RBP24.97■■□□□ 1.59
CAPRIN1-210ENST00000531668 SPATA31E1Q6ZUB1 1445 aa24.95■■□□□ 1.58
CAPRIN1-210ENST00000531668 LRRC7Q96NW7 1537 aa24.94■■□□□ 1.58
CAPRIN1-210ENST00000531668 SCAF1Q9H7N4 1312 aaKnown RBP24.93■■□□□ 1.58
CAPRIN1-210ENST00000531668 IQSEC2Q5JU85 1478 aa24.93■■□□□ 1.58
CAPRIN1-210ENST00000531668 PPLO60437 1756 aa24.92■■□□□ 1.58
CAPRIN1-210ENST00000531668 ADGRF5Q8IZF2 1346 aa24.9■■□□□ 1.58
CAPRIN1-210ENST00000531668 DIP2AQ14689 1571 aa24.9■■□□□ 1.58
CAPRIN1-210ENST00000531668 AMOTL2Q9Y2J4 779 aa24.9■■□□□ 1.58
CAPRIN1-210ENST00000531668 SETBP1Q9Y6X0 1596 aa24.89■■□□□ 1.58
CAPRIN1-210ENST00000531668 PIP4K2BP78356 416 aa24.89■■□□□ 1.58
CAPRIN1-210ENST00000531668 NRXN3Q9Y4C0 1643 aa24.88■■□□□ 1.57
CAPRIN1-210ENST00000531668 C14orf37Q86TY3 774 aa24.88■■□□□ 1.57
CAPRIN1-210ENST00000531668 KDM2AQ9Y2K7 1162 aa24.88■■□□□ 1.57
CAPRIN1-210ENST00000531668 TMEM94Q12767 1356 aa24.88■■□□□ 1.57
CAPRIN1-210ENST00000531668 CHD2O14647 1828 aaKnown RBP24.88■■□□□ 1.57
CAPRIN1-210ENST00000531668 TOM1O60784 492 aa24.87■■□□□ 1.57
CAPRIN1-210ENST00000531668 METP08581 1390 aa24.87■■□□□ 1.57
CAPRIN1-210ENST00000531668 PIK3R4Q99570 1358 aa24.85■■□□□ 1.57
CAPRIN1-210ENST00000531668 PCGF6Q9BYE7 350 aa24.85■■□□□ 1.57
CAPRIN1-210ENST00000531668 NWD1Q149M9 1564 aa24.84■■□□□ 1.57
CAPRIN1-210ENST00000531668 DCAF11Q8TEB1 546 aa24.84■■□□□ 1.57
CAPRIN1-210ENST00000531668 PTPRUQ92729 1446 aa24.84■■□□□ 1.57
CAPRIN1-210ENST00000531668 NKTRP30414 1462 aaKnown RBP24.83■■□□□ 1.57
CAPRIN1-210ENST00000531668 ALKQ9UM73 1620 aa24.82■■□□□ 1.56
CAPRIN1-210ENST00000531668 IFT172Q9UG01 1749 aa24.81■■□□□ 1.56
CAPRIN1-210ENST00000531668 NEUROD1Q13562 356 aa24.8■■□□□ 1.56
CAPRIN1-210ENST00000531668 XIRP1Q702N8 1843 aaKnown RBP24.79■■□□□ 1.56
CAPRIN1-210ENST00000531668 SIN3AQ96ST3 1273 aa24.78■■□□□ 1.56
CAPRIN1-210ENST00000531668 STK26Q9P289 416 aa24.78■■□□□ 1.56
CAPRIN1-210ENST00000531668 DHX57Q6P158 1386 aaKnown RBP24.78■■□□□ 1.56
CAPRIN1-210ENST00000531668 TMEM132EQ6IEE7 984 aa24.77■■□□□ 1.56
CAPRIN1-210ENST00000531668 MSH6P52701 1360 aa24.77■■□□□ 1.56
CAPRIN1-210ENST00000531668 CFAP70Q5T0N1 1121 aa24.74■■□□□ 1.55
CAPRIN1-210ENST00000531668 PIK3C2GO75747 1445 aa24.73■■□□□ 1.55
CAPRIN1-210ENST00000531668 SETD1AO15047 1707 aaKnown RBP24.72■■□□□ 1.55
CAPRIN1-210ENST00000531668 MYOM2P54296 1465 aa24.72■■□□□ 1.55
CAPRIN1-210ENST00000531668 XRN1Q8IZH2 1706 aaKnown RBP24.72■■□□□ 1.55
CAPRIN1-210ENST00000531668 C14orf93Q9H972 538 aaKnown RBP24.7■■□□□ 1.54
CAPRIN1-210ENST00000531668 ATF3P18847 181 aa24.69■■□□□ 1.54
CAPRIN1-210ENST00000531668 C19orf44Q9H6X5 657 aa24.68■■□□□ 1.54
CAPRIN1-210ENST00000531668 ROBO2Q9HCK4 1378 aa24.67■■□□□ 1.54
CAPRIN1-210ENST00000531668 NRXN1Q9ULB1 1477 aa24.66■■□□□ 1.54
CAPRIN1-210ENST00000531668 STAC3Q96MF2 364 aa24.65■■□□□ 1.54
CAPRIN1-210ENST00000531668 NCOA3Q9Y6Q9 1424 aa24.65■■□□□ 1.54
CAPRIN1-210ENST00000531668 SLAIN2Q9P270 581 aa24.64■■□□□ 1.54
CAPRIN1-210ENST00000531668 HSPA1LP34931 641 aa24.63■■□□□ 1.53
CAPRIN1-210ENST00000531668 CADPS2Q86UW7 1296 aa24.63■■□□□ 1.53
CAPRIN1-210ENST00000531668 L3MBTL2Q969R5 705 aa24.63■■□□□ 1.53
CAPRIN1-210ENST00000531668 LRPPRCP42704 1394 aaKnown RBP24.63■■□□□ 1.53
CAPRIN1-210ENST00000531668 ASXL1Q8IXJ9 1541 aa24.62■■□□□ 1.53
CAPRIN1-210ENST00000531668 WAPLQ7Z5K2 1190 aa24.62■■□□□ 1.53
CAPRIN1-210ENST00000531668 YTHDC2Q9H6S0 1430 aaKnown RBP24.61■■□□□ 1.53
CAPRIN1-210ENST00000531668 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.61■■□□□ 1.53
CAPRIN1-210ENST00000531668 PTCH1Q13635 1447 aa24.61■■□□□ 1.53
CAPRIN1-210ENST00000531668 LAMC1P11047 1609 aa24.6■■□□□ 1.53
CAPRIN1-210ENST00000531668 SAFB2Q14151 953 aaKnown RBP eCLIP24.58■■□□□ 1.53
CAPRIN1-210ENST00000531668 TRAK1Q9UPV9 953 aa24.58■■□□□ 1.53
CAPRIN1-210ENST00000531668 ABCC11Q96J66 1382 aa24.57■■□□□ 1.52
CAPRIN1-210ENST00000531668 ADGRL3Q9HAR2 1447 aa24.57■■□□□ 1.52
CAPRIN1-210ENST00000531668 POGKQ9P215 609 aa24.56■■□□□ 1.52
CAPRIN1-210ENST00000531668 PLEKHH1Q9ULM0 1364 aa24.55■■□□□ 1.52
CAPRIN1-210ENST00000531668 NALCNQ8IZF0 1738 aa24.55■■□□□ 1.52
CAPRIN1-210ENST00000531668 FAM135BQ49AJ0 1406 aa24.53■■□□□ 1.52
CAPRIN1-210ENST00000531668 PRAM1Q96QH2 718 aa24.53■■□□□ 1.52
CAPRIN1-210ENST00000531668 TONSLQ96HA7 1378 aa24.53■■□□□ 1.52
CAPRIN1-210ENST00000531668 ROBO1Q9Y6N7 1651 aa24.53■■□□□ 1.52
CAPRIN1-210ENST00000531668 TECPR2O15040 1411 aa24.52■■□□□ 1.52
CAPRIN1-210ENST00000531668 KNDC1Q76NI1 1749 aa24.51■■□□□ 1.51
CAPRIN1-210ENST00000531668 DCCP43146 1447 aa24.51■■□□□ 1.51
CAPRIN1-210ENST00000531668 PRAG1Q86YV5 1406 aa24.51■■□□□ 1.51
CAPRIN1-210ENST00000531668 NUTM2FA1L443 756 aa24.5■■□□□ 1.51
CAPRIN1-210ENST00000531668 NBPF1Q3BBV0 1214 aa24.5■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms