RNA–Protein interactions for RNA: ENST00000531668.1

CAPRIN1-210, Transcript of cell cycle associated protein 1, humanhuman

TSL 3

Gene CAPRIN1, Length 479 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-210ENST00000531668 NISCHQ9Y2I1 1504 aa41.12■■■■■ 4.17
CAPRIN1-210ENST00000531668 CCDC180Q9P1Z9 1646 aa36.48■■■■□ 3.43
CAPRIN1-210ENST00000531668 ABCC9O60706 1549 aa35.89■■■■□ 3.34
CAPRIN1-210ENST00000531668 DCAF8L2P0C7V8 631 aa34.7■■■■□ 3.15
CAPRIN1-210ENST00000531668 RB1CC1Q8TDY2 1594 aa34.4■■■■□ 3.1
CAPRIN1-210ENST00000531668 NACADO15069 1562 aa34.33■■■■□ 3.09
CAPRIN1-210ENST00000531668 ZCCHC6Q5VYS8 1495 aaKnown RBP34.23■■■■□ 3.07
CAPRIN1-210ENST00000531668 MYO15BQ96JP2 1530 aa34.01■■■■□ 3.04
CAPRIN1-210ENST00000531668 DCAF1Q9Y4B6 1507 aa33.9■■■■□ 3.02
CAPRIN1-210ENST00000531668 PABPN1Q86U42 306 aaKnown RBP eCLIP33.62■■■□□ 2.97
CAPRIN1-210ENST00000531668 UNC13AQ9UPW8 1703 aa33.62■■■□□ 2.97
CAPRIN1-210ENST00000531668 SCRIBQ14160 1630 aa33.46■■■□□ 2.95
CAPRIN1-210ENST00000531668 BICRAQ9NZM4 1560 aa33.33■■■□□ 2.93
CAPRIN1-210ENST00000531668 DNAJC5BQ9UF47 199 aa32.91■■■□□ 2.86
CAPRIN1-210ENST00000531668 SHROOM4Q9ULL8 1493 aa32.86■■■□□ 2.85
CAPRIN1-210ENST00000531668 EIF4G1Q04637 1599 aaKnown RBP32.49■■■□□ 2.79
CAPRIN1-210ENST00000531668 CC2D2AQ9P2K1 1620 aa32.39■■■□□ 2.78
CAPRIN1-210ENST00000531668 CECR2Q9BXF3 1484 aa32.19■■■□□ 2.74
CAPRIN1-210ENST00000531668 SMARCA4P51532 1647 aa31.91■■■□□ 2.7
CAPRIN1-210ENST00000531668 BAZ1AQ9NRL2 1556 aaPredicted RBP31.87■■■□□ 2.69
CAPRIN1-210ENST00000531668 MROH2BQ7Z745 1585 aa31.74■■■□□ 2.67
CAPRIN1-210ENST00000531668 ATAD2BQ9ULI0 1458 aa31.74■■■□□ 2.67
CAPRIN1-210ENST00000531668 SMARCA2P51531 1590 aa31.69■■■□□ 2.66
CAPRIN1-210ENST00000531668 NCAPD3P42695 1498 aa31.68■■■□□ 2.66
CAPRIN1-210ENST00000531668 BAZ1BQ9UIG0 1483 aaKnown RBP31.53■■■□□ 2.64
CAPRIN1-210ENST00000531668 HMGXB3Q12766 1538 aa31.5■■■□□ 2.63
CAPRIN1-210ENST00000531668 PEG3Q9GZU2 1588 aa31.49■■■□□ 2.63
CAPRIN1-210ENST00000531668 WIZO95785 1651 aa31.43■■■□□ 2.62
CAPRIN1-210ENST00000531668 RSF1Q96T23 1441 aaPredicted RBP31.37■■■□□ 2.61
CAPRIN1-210ENST00000531668 NESP48681 1621 aa31.04■■■□□ 2.56
CAPRIN1-210ENST00000531668 TOP2AP11388 1531 aaKnown RBP31.03■■■□□ 2.56
CAPRIN1-210ENST00000531668 ERCC6Q03468 1493 aa30.95■■■□□ 2.54
CAPRIN1-210ENST00000531668 LAMC3Q9Y6N6 1575 aa30.85■■■□□ 2.53
CAPRIN1-210ENST00000531668 SUPT5HO00267 1087 aaKnown RBP30.85■■■□□ 2.53
CAPRIN1-210ENST00000531668 CADPSQ9ULU8 1353 aa30.82■■■□□ 2.52
CAPRIN1-210ENST00000531668 CCDC88BA6NC98 1476 aa30.71■■■□□ 2.51
CAPRIN1-210ENST00000531668 PDS5BQ9NTI5 1447 aa30.71■■■□□ 2.51
CAPRIN1-210ENST00000531668 KIF21AQ7Z4S6 1674 aa30.62■■■□□ 2.49
CAPRIN1-210ENST00000531668 CFTRP13569 1480 aa30.59■■■□□ 2.49
CAPRIN1-210ENST00000531668 FANCD2Q9BXW9 1451 aa30.49■■■□□ 2.47
CAPRIN1-210ENST00000531668 CUX2O14529 1486 aa30.46■■■□□ 2.47
CAPRIN1-210ENST00000531668 THOC2Q8NI27 1593 aaKnown RBP30.45■■■□□ 2.47
CAPRIN1-210ENST00000531668 CEP164Q9UPV0 1460 aa30.45■■■□□ 2.47
CAPRIN1-210ENST00000531668 MRC2Q9UBG0 1479 aa30.38■■■□□ 2.45
CAPRIN1-210ENST00000531668 PRDM2Q13029 1718 aa30.34■■■□□ 2.45
CAPRIN1-210ENST00000531668 WDR62O43379 1518 aa30.22■■■□□ 2.43
CAPRIN1-210ENST00000531668 URB2Q14146 1524 aaKnown RBP30.16■■■□□ 2.42
CAPRIN1-210ENST00000531668 TOPBP1Q92547 1522 aa29.98■■■□□ 2.39
CAPRIN1-210ENST00000531668 ABCC8Q09428 1581 aa29.94■■■□□ 2.38
CAPRIN1-210ENST00000531668 DNMBPQ6XZF7 1577 aa29.93■■■□□ 2.38
CAPRIN1-210ENST00000531668 IFT140Q96RY7 1462 aa29.78■■■□□ 2.36
CAPRIN1-210ENST00000531668 CUX1P39880 1505 aa29.76■■■□□ 2.36
CAPRIN1-210ENST00000531668 POLA1P09884 1462 aaPredicted RBP29.73■■■□□ 2.35
CAPRIN1-210ENST00000531668 FGD5Q6ZNL6 1462 aa29.69■■■□□ 2.34
CAPRIN1-210ENST00000531668 ZNF608Q9ULD9 1512 aaPredicted RBP29.69■■■□□ 2.34
CAPRIN1-210ENST00000531668 RAD54L2Q9Y4B4 1467 aa29.68■■■□□ 2.34
CAPRIN1-210ENST00000531668 SOGA1O94964 1423 aa29.67■■■□□ 2.34
CAPRIN1-210ENST00000531668 WRNQ14191 1432 aaPredicted RBP eCLIP29.62■■■□□ 2.33
CAPRIN1-210ENST00000531668 TARBP1Q13395 1621 aaKnown RBP29.6■■■□□ 2.33
CAPRIN1-210ENST00000531668 DNAJC5Q9H3Z4 198 aa29.59■■■□□ 2.33
CAPRIN1-210ENST00000531668 AQRO60306 1485 aaKnown RBP eCLIP29.56■■■□□ 2.328e-7■■■■□ 25.5
CAPRIN1-210ENST00000531668 TDRD9Q8NDG6 1382 aaKnown RBP29.53■■■□□ 2.32
CAPRIN1-210ENST00000531668 EIF4G3O43432 1585 aaKnown RBP29.53■■■□□ 2.32
CAPRIN1-210ENST00000531668 SYNJ1O43426 1573 aa29.52■■■□□ 2.32
CAPRIN1-210ENST00000531668 TOP2BQ02880 1626 aa29.48■■■□□ 2.31
CAPRIN1-210ENST00000531668 BIVM-ERCC5R4GMW8 1640 aa29.45■■■□□ 2.31
CAPRIN1-210ENST00000531668 FBLN2P98095 1184 aa29.36■■■□□ 2.29
CAPRIN1-210ENST00000531668 OSCARQ8IYS5 282 aa29.35■■■□□ 2.29
CAPRIN1-210ENST00000531668 ABCA10Q8WWZ4 1543 aa29.34■■■□□ 2.29
CAPRIN1-210ENST00000531668 WDR97A6NE52 1622 aa29.34■■■□□ 2.29
CAPRIN1-210ENST00000531668 GAPVD1Q14C86 1478 aa29.29■■■□□ 2.28
CAPRIN1-210ENST00000531668 GRIN2BQ13224 1484 aa29.27■■■□□ 2.28
CAPRIN1-210ENST00000531668 SNAPC4Q5SXM2 1469 aa29.26■■■□□ 2.27
CAPRIN1-210ENST00000531668 PBRM1Q86U86 1689 aa29.21■■■□□ 2.27
CAPRIN1-210ENST00000531668 ABCA5Q8WWZ7 1642 aa29.2■■■□□ 2.27
CAPRIN1-210ENST00000531668 CHMP7Q8WUX9 453 aaPredicted RBP29.19■■■□□ 2.26
CAPRIN1-210ENST00000531668 CHD1O14646 1710 aa29.19■■■□□ 2.26
CAPRIN1-210ENST00000531668 MAGI1Q96QZ7 1491 aaPredicted RBP29.15■■■□□ 2.26
CAPRIN1-210ENST00000531668 SYNJ2O15056 1496 aa29.06■■■□□ 2.24
CAPRIN1-210ENST00000531668 TRIM41Q8WV44 630 aa29.06■■■□□ 2.24
CAPRIN1-210ENST00000531668 KIF27Q86VH2 1401 aa29■■■□□ 2.23
CAPRIN1-210ENST00000531668 ERICH3Q5RHP9 1530 aa28.98■■■□□ 2.23
CAPRIN1-210ENST00000531668 ADAMTS12P58397 1594 aa28.96■■■□□ 2.23
CAPRIN1-210ENST00000531668 FHAD1B1AJZ9 1412 aa28.94■■■□□ 2.22
CAPRIN1-210ENST00000531668 GRIN2AQ12879 1464 aa28.89■■■□□ 2.22
CAPRIN1-210ENST00000531668 IGF1RP08069 1367 aa28.86■■■□□ 2.21
CAPRIN1-210ENST00000531668 RIMBP3CA6NJZ7 1639 aa28.8■■■□□ 2.2
CAPRIN1-210ENST00000531668 RIMBP3BA6NNM3 1639 aa28.8■■■□□ 2.2
CAPRIN1-210ENST00000531668 RIMBP3Q9UFD9 1639 aa28.8■■■□□ 2.2
CAPRIN1-210ENST00000531668 ARHGEF11O15085 1522 aa28.79■■■□□ 2.2
CAPRIN1-210ENST00000531668 CLASP1Q7Z460 1538 aa28.79■■■□□ 2.2
CAPRIN1-210ENST00000531668 RUSC2Q8N2Y8 1516 aa28.79■■■□□ 2.2
CAPRIN1-210ENST00000531668 CEP170Q5SW79 1584 aa28.74■■■□□ 2.19
CAPRIN1-210ENST00000531668 CARMIL1Q5VZK9 1371 aa28.74■■■□□ 2.19
CAPRIN1-210ENST00000531668 CUL7Q14999 1698 aa28.74■■■□□ 2.19
CAPRIN1-210ENST00000531668 NUP160Q12769 1436 aa28.71■■■□□ 2.19
CAPRIN1-210ENST00000531668 CYB5RLQ6IPT4 315 aa28.68■■■□□ 2.18
CAPRIN1-210ENST00000531668 CHIC1Q5VXU3 224 aa28.67■■■□□ 2.18
CAPRIN1-210ENST00000531668 FAM9AQ8IZU1 332 aaPredicted RBP28.58■■■□□ 2.17
CAPRIN1-210ENST00000531668 ARAP1Q96P48 1450 aa28.56■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms