RNA–Protein interactions for RNA: ENST00000531243.2

PABPC4-225, Transcript of poly(A) binding protein cytoplasmic 4, human

TSL 4

Gene PABPC4, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC4-225	ENST00000531243	RIMS2	Q9UQ26	1411 aa		30.96	■■■□□ 2.55
PABPC4-225	ENST00000531243	SCAF11	Q99590	1463 aa	Known RBP	30.95	■■■□□ 2.54
PABPC4-225	ENST00000531243	PPP1R15A	O75807	674 aa	Predicted RBP	30.94	■■■□□ 2.54
PABPC4-225	ENST00000531243	SPATA31E1	Q6ZUB1	1445 aa		30.93	■■■□□ 2.54
PABPC4-225	ENST00000531243	CLSPN	Q9HAW4	1339 aa		30.92	■■■□□ 2.54
PABPC4-225	ENST00000531243	ZFYVE9	O95405	1425 aa		30.91	■■■□□ 2.54
PABPC4-225	ENST00000531243	RGL3	Q3MIN7	710 aa		30.91	■■■□□ 2.54
PABPC4-225	ENST00000531243	PPL	O60437	1756 aa		30.91	■■■□□ 2.54
PABPC4-225	ENST00000531243	NCKAP5L	Q9HCH0	1330 aa		30.91	■■■□□ 2.54
PABPC4-225	ENST00000531243	CCER1	Q8TC90	406 aa	Predicted RBP	30.89	■■■□□ 2.54
PABPC4-225	ENST00000531243	NEXMIF	Q5QGS0	1516 aa		30.88	■■■□□ 2.53
PABPC4-225	ENST00000531243	MED14	O60244	1454 aa		30.88	■■■□□ 2.53
PABPC4-225	ENST00000531243	VGF	O15240	615 aa	Predicted RBP	30.87	■■■□□ 2.53
PABPC4-225	ENST00000531243	LTK	P29376	864 aa		30.87	■■■□□ 2.53
PABPC4-225	ENST00000531243	IQGAP1	P46940	1657 aa		30.87	■■■□□ 2.53
PABPC4-225	ENST00000531243	IFT172	Q9UG01	1749 aa		30.86	■■■□□ 2.53
PABPC4-225	ENST00000531243	NPHP4	O75161	1426 aa	Predicted RBP	30.85	■■■□□ 2.53
PABPC4-225	ENST00000531243	NEUROD1	Q13562	356 aa		30.84	■■■□□ 2.53
PABPC4-225	ENST00000531243	BCAN	Q96GW7	911 aa		30.83	■■■□□ 2.53
PABPC4-225	ENST00000531243	STAC3	Q96MF2	364 aa		30.83	■■■□□ 2.53
PABPC4-225	ENST00000531243	SIN3A	Q96ST3	1273 aa		30.83	■■■□□ 2.53
PABPC4-225	ENST00000531243	PLEKHG1	Q9ULL1	1385 aa		30.81	■■■□□ 2.52
PABPC4-225	ENST00000531243	NUTM2D	Q5VT03	806 aa	Predicted RBP	30.8	■■■□□ 2.52
PABPC4-225	ENST00000531243	DCAF11	Q8TEB1	546 aa		30.74	■■■□□ 2.51
PABPC4-225	ENST00000531243	MYOM2	P54296	1465 aa		30.74	■■■□□ 2.51
PABPC4-225	ENST00000531243	TONSL	Q96HA7	1378 aa		30.73	■■■□□ 2.51
PABPC4-225	ENST00000531243	DIP2A	Q14689	1571 aa		30.72	■■■□□ 2.51
PABPC4-225	ENST00000531243	SETBP1	Q9Y6X0	1596 aa		30.71	■■■□□ 2.51
PABPC4-225	ENST00000531243	KDM2A	Q9Y2K7	1162 aa		30.69	■■■□□ 2.5
PABPC4-225	ENST00000531243	TBX22	Q9Y458	520 aa		30.66	■■■□□ 2.5
PABPC4-225	ENST00000531243	ADGRF5	Q8IZF2	1346 aa		30.66	■■■□□ 2.5
PABPC4-225	ENST00000531243	L3MBTL2	Q969R5	705 aa		30.65	■■■□□ 2.5
PABPC4-225	ENST00000531243	SLC26A8	Q96RN1	970 aa		30.65	■■■□□ 2.5
PABPC4-225	ENST00000531243	NRXN3	Q9Y4C0	1643 aa		30.65	■■■□□ 2.5
PABPC4-225	ENST00000531243	SENP3	Q9H4L4	574 aa	Predicted RBP	30.64	■■■□□ 2.5
PABPC4-225	ENST00000531243	TIMELESS	Q9UNS1	1208 aa		30.64	■■■□□ 2.5
PABPC4-225	ENST00000531243	NRXN1	Q9ULB1	1477 aa		30.63	■■■□□ 2.49
PABPC4-225	ENST00000531243	LAMC1	P11047	1609 aa		30.63	■■■□□ 2.49
PABPC4-225	ENST00000531243	PIK3C2G	O75747	1445 aa		30.63	■■■□□ 2.49
PABPC4-225	ENST00000531243	ADAMTS13	Q76LX8	1427 aa		30.62	■■■□□ 2.49
PABPC4-225	ENST00000531243	ALK	Q9UM73	1620 aa		30.6	■■■□□ 2.49
PABPC4-225	ENST00000531243	PIK3R4	Q99570	1358 aa		30.59	■■■□□ 2.49
PABPC4-225	ENST00000531243	CHD2	O14647	1828 aa	Known RBP	30.57	■■■□□ 2.48
PABPC4-225	ENST00000531243	SETD1A	O15047	1707 aa	Known RBP	30.56	■■■□□ 2.48
PABPC4-225	ENST00000531243	KIAA1210	Q9ULL0	1709 aa		30.53	■■■□□ 2.48
PABPC4-225	ENST00000531243	C14orf93	Q9H972	538 aa	Known RBP	30.53	■■■□□ 2.48
PABPC4-225	ENST00000531243	PRAG1	Q86YV5	1406 aa		30.51	■■■□□ 2.47
PABPC4-225	ENST00000531243	KCNA6	P17658	529 aa		30.51	■■■□□ 2.47
PABPC4-225	ENST00000531243	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	30.5	■■■□□ 2.47
PABPC4-225	ENST00000531243	NWD1	Q149M9	1564 aa		30.49	■■■□□ 2.47
PABPC4-225	ENST00000531243	CPS1	P31327	1500 aa		30.48	■■■□□ 2.47
PABPC4-225	ENST00000531243	CFAP70	Q5T0N1	1121 aa		30.48	■■■□□ 2.47
PABPC4-225	ENST00000531243	MET	P08581	1390 aa		30.47	■■■□□ 2.47
PABPC4-225	ENST00000531243	STRCP1	A6NGW2	1772 aa		30.46	■■■□□ 2.47
PABPC4-225	ENST00000531243	AMOTL2	Q9Y2J4	779 aa		30.44	■■■□□ 2.46
PABPC4-225	ENST00000531243	NKTR	P30414	1462 aa	Known RBP	30.44	■■■□□ 2.46
PABPC4-225	ENST00000531243	TRPM1	Q7Z4N2	1603 aa		30.42	■■■□□ 2.46
PABPC4-225	ENST00000531243	LTBP4	Q8N2S1	1624 aa		30.42	■■■□□ 2.46
PABPC4-225	ENST00000531243	XRN1	Q8IZH2	1706 aa	Known RBP	30.42	■■■□□ 2.46
PABPC4-225	ENST00000531243	TMEM132E	Q6IEE7	984 aa		30.39	■■■□□ 2.46
PABPC4-225	ENST00000531243	KNDC1	Q76NI1	1749 aa		30.39	■■■□□ 2.45
PABPC4-225	ENST00000531243	PTPRU	Q92729	1446 aa		30.39	■■■□□ 2.45
PABPC4-225	ENST00000531243	ASXL1	Q8IXJ9	1541 aa		30.37	■■■□□ 2.45
PABPC4-225	ENST00000531243	LRPPRC	P42704	1394 aa	Known RBP	30.37	■■■□□ 2.45
PABPC4-225	ENST00000531243	YTHDC2	Q9H6S0	1430 aa	Known RBP	30.37	■■■□□ 2.45
PABPC4-225	ENST00000531243	PROSER2	Q86WR7	435 aa	Predicted RBP	30.36	■■■□□ 2.45
PABPC4-225	ENST00000531243	ADGRB1	O14514	1584 aa		30.36	■■■□□ 2.45
PABPC4-225	ENST00000531243	ABCC11	Q96J66	1382 aa		30.34	■■■□□ 2.45
PABPC4-225	ENST00000531243	PHF23	Q9BUL5	403 aa	Predicted RBP	30.34	■■■□□ 2.45
PABPC4-225	ENST00000531243	PTCH1	Q13635	1447 aa		30.33	■■■□□ 2.45
PABPC4-225	ENST00000531243	ROCK2	O75116	1388 aa	Known RBP	30.33	■■■□□ 2.45
PABPC4-225	ENST00000531243	NBPF8	Q3BBV2	869 aa		30.33	■■■□□ 2.45
PABPC4-225	ENST00000531243	STK26	Q9P289	416 aa		30.33	■■■□□ 2.45
PABPC4-225	ENST00000531243	LRRC7	Q96NW7	1537 aa		30.31	■■■□□ 2.44
PABPC4-225	ENST00000531243	TECPR2	O15040	1411 aa		30.3	■■■□□ 2.44
PABPC4-225	ENST00000531243	RALGAPB	Q86X10	1494 aa		30.3	■■■□□ 2.44
PABPC4-225	ENST00000531243	NCOA3	Q9Y6Q9	1424 aa		30.3	■■■□□ 2.44
PABPC4-225	ENST00000531243	IQSEC2	Q5JU85	1478 aa		30.29	■■■□□ 2.44
PABPC4-225	ENST00000531243	DLC1	Q96QB1	1528 aa		30.28	■■■□□ 2.44
PABPC4-225	ENST00000531243	NBPF1	Q3BBV0	1214 aa		30.28	■■■□□ 2.44
PABPC4-225	ENST00000531243	SIRT1	Q96EB6	747 aa		30.28	■■■□□ 2.44
PABPC4-225	ENST00000531243	CERK	Q8TCT0	537 aa		30.27	■■■□□ 2.44
PABPC4-225	ENST00000531243	XIRP1	Q702N8	1843 aa	Known RBP	30.26	■■■□□ 2.44
PABPC4-225	ENST00000531243	TMEM94	Q12767	1356 aa		30.26	■■■□□ 2.43
PABPC4-225	ENST00000531243	TRAK1	Q9UPV9	953 aa		30.25	■■■□□ 2.43
PABPC4-225	ENST00000531243	FAM135B	Q49AJ0	1406 aa		30.24	■■■□□ 2.43
PABPC4-225	ENST00000531243	C14orf37	Q86TY3	774 aa		30.24	■■■□□ 2.43
PABPC4-225	ENST00000531243	ARHGEF28	Q8N1W1	1705 aa	Known RBP	30.23	■■■□□ 2.43
PABPC4-225	ENST00000531243	CARD11	Q9BXL7	1154 aa		30.23	■■■□□ 2.43
PABPC4-225	ENST00000531243	GPRASP1	Q5JY77	1395 aa		30.23	■■■□□ 2.43
PABPC4-225	ENST00000531243	ROBO2	Q9HCK4	1378 aa		30.23	■■■□□ 2.43
PABPC4-225	ENST00000531243	POGK	Q9P215	609 aa		30.22	■■■□□ 2.43
PABPC4-225	ENST00000531243	EIF3A	Q14152	1382 aa	Known RBP	30.2	■■■□□ 2.43
PABPC4-225	ENST00000531243	MSH6	P52701	1360 aa		30.19	■■■□□ 2.42
PABPC4-225	ENST00000531243	PRAM1	Q96QH2	718 aa		30.16	■■■□□ 2.42
PABPC4-225	ENST00000531243	C19orf44	Q9H6X5	657 aa		30.16	■■■□□ 2.42
PABPC4-225	ENST00000531243	WAPL	Q7Z5K2	1190 aa		30.15	■■■□□ 2.42
PABPC4-225	ENST00000531243	RBM33	Q96EV2	1170 aa	Known RBP	30.15	■■■□□ 2.42
PABPC4-225	ENST00000531243	ADGRL3	Q9HAR2	1447 aa		30.13	■■■□□ 2.41
PABPC4-225	ENST00000531243	NALCN	Q8IZF0	1738 aa		30.13	■■■□□ 2.41

Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms