RNA–Protein interactions for RNA: ENST00000531010.1

CHID1-218, Transcript of chitinase domain containing 1, humanhuman

TSL 2

Gene CHID1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHID1-218ENST00000531010 RGL3Q3MIN7 710 aa28.46■■■□□ 2.15
CHID1-218ENST00000531010 THEMISQ8N1K5 641 aaPredicted RBP28.45■■■□□ 2.14
CHID1-218ENST00000531010 NUTM2DQ5VT03 806 aaPredicted RBP28.44■■■□□ 2.14
CHID1-218ENST00000531010 LTKP29376 864 aa28.43■■■□□ 2.14
CHID1-218ENST00000531010 ZNF326Q5BKZ1 582 aaKnown RBP28.42■■■□□ 2.14
CHID1-218ENST00000531010 NCKAP5LQ9HCH0 1330 aa28.4■■■□□ 2.14
CHID1-218ENST00000531010 SCAF11Q99590 1463 aaKnown RBP28.39■■■□□ 2.13
CHID1-218ENST00000531010 CLSPNQ9HAW4 1339 aa28.38■■■□□ 2.13
CHID1-218ENST00000531010 IQGAP1P46940 1657 aa28.36■■■□□ 2.13
CHID1-218ENST00000531010 SENP3Q9H4L4 574 aaPredicted RBP28.36■■■□□ 2.13
CHID1-218ENST00000531010 NRXN3Q9Y4C0 1643 aa28.36■■■□□ 2.13
CHID1-218ENST00000531010 TXNDC2Q86VQ3 553 aa28.34■■■□□ 2.13
CHID1-218ENST00000531010 L3MBTL2Q969R5 705 aa28.31■■■□□ 2.12
CHID1-218ENST00000531010 RPGRIP1LQ68CZ1 1315 aa28.31■■■□□ 2.12
CHID1-218ENST00000531010 ADGRF5Q8IZF2 1346 aa28.31■■■□□ 2.12
CHID1-218ENST00000531010 MED14O60244 1454 aa28.31■■■□□ 2.12
CHID1-218ENST00000531010 MYOM2P54296 1465 aa28.3■■■□□ 2.12
CHID1-218ENST00000531010 ANKLE2Q86XL3 938 aa28.3■■■□□ 2.12
CHID1-218ENST00000531010 SETD1AO15047 1707 aaKnown RBP28.29■■■□□ 2.12
CHID1-218ENST00000531010 NRXN1Q9ULB1 1477 aa28.28■■■□□ 2.12
CHID1-218ENST00000531010 NPHP4O75161 1426 aaPredicted RBP28.28■■■□□ 2.12
CHID1-218ENST00000531010 DCAF11Q8TEB1 546 aa28.28■■■□□ 2.12
CHID1-218ENST00000531010 KDM2AQ9Y2K7 1162 aa28.27■■■□□ 2.12
CHID1-218ENST00000531010 PLEKHG1Q9ULL1 1385 aa28.26■■■□□ 2.12
CHID1-218ENST00000531010 SETBP1Q9Y6X0 1596 aa28.26■■■□□ 2.11
CHID1-218ENST00000531010 EID1Q9Y6B2 187 aa28.26■■■□□ 2.11
CHID1-218ENST00000531010 PPP1R15AO75807 674 aaPredicted RBP28.25■■■□□ 2.11
CHID1-218ENST00000531010 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.25■■■□□ 2.11
CHID1-218ENST00000531010 TONSLQ96HA7 1378 aa28.24■■■□□ 2.11
CHID1-218ENST00000531010 ADAMTS13Q76LX8 1427 aa28.24■■■□□ 2.11
CHID1-218ENST00000531010 PIK3C2GO75747 1445 aa28.23■■■□□ 2.11
CHID1-218ENST00000531010 ALKQ9UM73 1620 aa28.19■■■□□ 2.1
CHID1-218ENST00000531010 VGFO15240 615 aaPredicted RBP28.19■■■□□ 2.1
CHID1-218ENST00000531010 ASXL1Q8IXJ9 1541 aa28.18■■■□□ 2.1
CHID1-218ENST00000531010 PRAG1Q86YV5 1406 aa28.18■■■□□ 2.1
CHID1-218ENST00000531010 HDGFP51858 240 aaKnown RBP28.17■■■□□ 2.1
CHID1-218ENST00000531010 SLC26A8Q96RN1 970 aa28.17■■■□□ 2.1
CHID1-218ENST00000531010 STRCP1A6NGW2 1772 aa28.15■■■□□ 2.1
CHID1-218ENST00000531010 NBPF8Q3BBV2 869 aa28.14■■■□□ 2.1
CHID1-218ENST00000531010 DIP2AQ14689 1571 aa28.14■■■□□ 2.1
CHID1-218ENST00000531010 TRPM1Q7Z4N2 1603 aa28.14■■■□□ 2.09
CHID1-218ENST00000531010 BCANQ96GW7 911 aa28.13■■■□□ 2.09
CHID1-218ENST00000531010 LAMC1P11047 1609 aa28.12■■■□□ 2.09
CHID1-218ENST00000531010 KIAA1210Q9ULL0 1709 aa28.1■■■□□ 2.09
CHID1-218ENST00000531010 CFAP70Q5T0N1 1121 aa28.1■■■□□ 2.09
CHID1-218ENST00000531010 CHD2O14647 1828 aaKnown RBP28.1■■■□□ 2.09
CHID1-218ENST00000531010 METP08581 1390 aa28.1■■■□□ 2.09
CHID1-218ENST00000531010 PTPRUQ92729 1446 aa28.09■■■□□ 2.09
CHID1-218ENST00000531010 ADGRB1O14514 1584 aa28.07■■■□□ 2.08
CHID1-218ENST00000531010 STAC3Q96MF2 364 aa28.06■■■□□ 2.08
CHID1-218ENST00000531010 C14orf93Q9H972 538 aaKnown RBP28.06■■■□□ 2.08
CHID1-218ENST00000531010 TIMELESSQ9UNS1 1208 aa28.05■■■□□ 2.08
CHID1-218ENST00000531010 TBX22Q9Y458 520 aa28.05■■■□□ 2.08
CHID1-218ENST00000531010 XRN1Q8IZH2 1706 aaKnown RBP28.04■■■□□ 2.08
CHID1-218ENST00000531010 NWD1Q149M9 1564 aa28.03■■■□□ 2.08
CHID1-218ENST00000531010 NBPF1Q3BBV0 1214 aa28.03■■■□□ 2.08
CHID1-218ENST00000531010 TMEM132EQ6IEE7 984 aa28.03■■■□□ 2.08
CHID1-218ENST00000531010 ZNF335Q9H4Z2 1342 aaPredicted RBP28.02■■■□□ 2.08
CHID1-218ENST00000531010 DMRT2Q9Y5R5 561 aa28.02■■■□□ 2.08
CHID1-218ENST00000531010 RALGAPBQ86X10 1494 aa27.99■■■□□ 2.07
CHID1-218ENST00000531010 KNDC1Q76NI1 1749 aa27.98■■■□□ 2.07
CHID1-218ENST00000531010 LTBP4Q8N2S1 1624 aa27.96■■■□□ 2.07
CHID1-218ENST00000531010 PIK3R4Q99570 1358 aa27.95■■■□□ 2.06
CHID1-218ENST00000531010 YTHDC2Q9H6S0 1430 aaKnown RBP27.94■■■□□ 2.06
CHID1-218ENST00000531010 XIRP1Q702N8 1843 aaKnown RBP27.94■■■□□ 2.06
CHID1-218ENST00000531010 ARHGEF28Q8N1W1 1705 aaKnown RBP27.92■■■□□ 2.06
CHID1-218ENST00000531010 LRPPRCP42704 1394 aaKnown RBP27.91■■■□□ 2.06
CHID1-218ENST00000531010 KCNA6P17658 529 aa27.91■■■□□ 2.06
CHID1-218ENST00000531010 AMOTL2Q9Y2J4 779 aa27.91■■■□□ 2.06
CHID1-218ENST00000531010 CPS1P31327 1500 aa27.91■■■□□ 2.06
CHID1-218ENST00000531010 STK26Q9P289 416 aa27.9■■■□□ 2.06
CHID1-218ENST00000531010 ROCK2O75116 1388 aaKnown RBP27.89■■■□□ 2.06
CHID1-218ENST00000531010 GPRASP1Q5JY77 1395 aa27.89■■■□□ 2.06
CHID1-218ENST00000531010 ROBO2Q9HCK4 1378 aa27.88■■■□□ 2.05
CHID1-218ENST00000531010 TECPR2O15040 1411 aa27.88■■■□□ 2.05
CHID1-218ENST00000531010 NKTRP30414 1462 aaKnown RBP27.87■■■□□ 2.05
CHID1-218ENST00000531010 RBM33Q96EV2 1170 aaKnown RBP27.86■■■□□ 2.05
CHID1-218ENST00000531010 LRRC7Q96NW7 1537 aa27.85■■■□□ 2.05
CHID1-218ENST00000531010 ABCC11Q96J66 1382 aa27.85■■■□□ 2.05
CHID1-218ENST00000531010 PLEKHH1Q9ULM0 1364 aa27.85■■■□□ 2.05
CHID1-218ENST00000531010 PTCH1Q13635 1447 aa27.84■■■□□ 2.05
CHID1-218ENST00000531010 DLC1Q96QB1 1528 aa27.83■■■□□ 2.05
CHID1-218ENST00000531010 TRAK1Q9UPV9 953 aa27.83■■■□□ 2.05
CHID1-218ENST00000531010 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.82■■■□□ 2.04
CHID1-218ENST00000531010 NALCNQ8IZF0 1738 aa27.81■■■□□ 2.04
CHID1-218ENST00000531010 WAPLQ7Z5K2 1190 aa27.79■■■□□ 2.04
CHID1-218ENST00000531010 CARD11Q9BXL7 1154 aa27.79■■■□□ 2.04
CHID1-218ENST00000531010 QRICH2Q9H0J4 1663 aa27.77■■■□□ 2.04
CHID1-218ENST00000531010 TMEM94Q12767 1356 aa27.76■■■□□ 2.03
CHID1-218ENST00000531010 PROSER2Q86WR7 435 aaPredicted RBP27.75■■■□□ 2.03
CHID1-218ENST00000531010 FAM135BQ49AJ0 1406 aa27.75■■■□□ 2.03
CHID1-218ENST00000531010 PRAM1Q96QH2 718 aa27.74■■■□□ 2.03
CHID1-218ENST00000531010 SAFB2Q14151 953 aaKnown RBP eCLIP27.72■■■□□ 2.03
CHID1-218ENST00000531010 USP47Q96K76 1375 aa27.7■■■□□ 2.02
CHID1-218ENST00000531010 SIRT1Q96EB6 747 aa27.69■■■□□ 2.02
CHID1-218ENST00000531010 ADGRL3Q9HAR2 1447 aa27.67■■■□□ 2.02
CHID1-218ENST00000531010 ZEB1P37275 1124 aaPredicted RBP27.65■■■□□ 2.02
CHID1-218ENST00000531010 POGKQ9P215 609 aa27.65■■■□□ 2.02
CHID1-218ENST00000531010 ADGRB2O60241 1585 aa27.65■■■□□ 2.02
CHID1-218ENST00000531010 CENPJQ9HC77 1338 aaPredicted RBP27.64■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms