RNA–Protein interactions for RNA: ENST00000530620.5

C11orf54-209, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 5

Gene C11orf54, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-209ENST00000530620 SCAF11Q99590 1463 aaKnown RBP16.72■□□□□ 0.27
C11orf54-209ENST00000530620 KDM5AP29375 1690 aaKnown RBP16.72■□□□□ 0.27
C11orf54-209ENST00000530620 ARHGAP23Q9P227 1491 aa16.71■□□□□ 0.27
C11orf54-209ENST00000530620 LMTK2Q8IWU2 1503 aa16.7■□□□□ 0.26
C11orf54-209ENST00000530620 LRRC7Q96NW7 1537 aa16.7■□□□□ 0.26
C11orf54-209ENST00000530620 MED1Q15648 1581 aaPredicted RBP16.69■□□□□ 0.26
C11orf54-209ENST00000530620 EFCAB6Q5THR3 1501 aa16.69■□□□□ 0.26
C11orf54-209ENST00000530620 PIP4K2BP78356 416 aa16.68■□□□□ 0.26
C11orf54-209ENST00000530620 ANKRD30AQ9BXX3 1397 aa16.67■□□□□ 0.26
C11orf54-209ENST00000530620 SOCS7O14512 581 aa16.67■□□□□ 0.26
C11orf54-209ENST00000530620 ADGRL2O95490 1459 aa16.67■□□□□ 0.26
C11orf54-209ENST00000530620 KANK1Q14678 1352 aa16.66■□□□□ 0.26
C11orf54-209ENST00000530620 MYO5BQ9ULV0 1848 aa16.66■□□□□ 0.26
C11orf54-209ENST00000530620 TOM1O60784 492 aa16.66■□□□□ 0.26
C11orf54-209ENST00000530620 HSPA1LP34931 641 aa16.66■□□□□ 0.26
C11orf54-209ENST00000530620 CHIC2Q9UKJ5 165 aa16.65■□□□□ 0.26
C11orf54-209ENST00000530620 LTKP29376 864 aa16.63■□□□□ 0.25
C11orf54-209ENST00000530620 ADGRB3O60242 1522 aa16.63■□□□□ 0.25
C11orf54-209ENST00000530620 GCC2Q8IWJ2 1684 aa16.62■□□□□ 0.25
C11orf54-209ENST00000530620 SPDYE2BA6NHP3 402 aa16.62■□□□□ 0.25
C11orf54-209ENST00000530620 SPDYE6P0CI01 402 aa16.62■□□□□ 0.25
C11orf54-209ENST00000530620 SPDYE2Q495Y8 402 aa16.62■□□□□ 0.25
C11orf54-209ENST00000530620 TET3O43151 1660 aa16.62■□□□□ 0.25
C11orf54-209ENST00000530620 TMEM2Q9UHN6 1383 aa16.61■□□□□ 0.25
C11orf54-209ENST00000530620 NOS1P29475 1434 aa16.61■□□□□ 0.25
C11orf54-209ENST00000530620 UNC13BO14795 1591 aa16.6■□□□□ 0.25
C11orf54-209ENST00000530620 TXNDC2Q86VQ3 553 aa16.6■□□□□ 0.25
C11orf54-209ENST00000530620 ANKRD50Q9ULJ7 1429 aa16.57■□□□□ 0.24
C11orf54-209ENST00000530620 EID1Q9Y6B2 187 aa16.57■□□□□ 0.24
C11orf54-209ENST00000530620 E9PCH4 1651 aa16.56■□□□□ 0.24
C11orf54-209ENST00000530620 IDI1Q13907 227 aa16.56■□□□□ 0.24
C11orf54-209ENST00000530620 FAM50AQ14320 339 aaKnown RBP16.56■□□□□ 0.24
C11orf54-209ENST00000530620 NWD1Q149M9 1564 aa16.55■□□□□ 0.24
C11orf54-209ENST00000530620 RPRD2Q5VT52 1461 aaKnown RBP16.55■□□□□ 0.24
C11orf54-209ENST00000530620 STAG3Q9UJ98 1225 aa16.55■□□□□ 0.24
C11orf54-209ENST00000530620 TMEM131LA2VDJ0 1609 aa16.54■□□□□ 0.24
C11orf54-209ENST00000530620 ZNF692Q9BU19 519 aaPredicted RBP16.53■□□□□ 0.24
C11orf54-209ENST00000530620 IQGAP3Q86VI3 1631 aa16.52■□□□□ 0.24
C11orf54-209ENST00000530620 CHD2O14647 1828 aaKnown RBP16.52■□□□□ 0.24
C11orf54-209ENST00000530620 ROBO1Q9Y6N7 1651 aa16.5■□□□□ 0.23
C11orf54-209ENST00000530620 NKTRP30414 1462 aaKnown RBP16.5■□□□□ 0.23
C11orf54-209ENST00000530620 SPDYE4A6NLX3 237 aa16.49■□□□□ 0.23
C11orf54-209ENST00000530620 ZFYVE9O95405 1425 aa16.49■□□□□ 0.23
C11orf54-209ENST00000530620 TMEM94Q12767 1356 aa16.49■□□□□ 0.23
C11orf54-209ENST00000530620 AKT1S1Q96B36 256 aa16.48■□□□□ 0.23
C11orf54-209ENST00000530620 SLC26A8Q96RN1 970 aa16.48■□□□□ 0.23
C11orf54-209ENST00000530620 SLC52A1Q9NWF4 448 aa16.47■□□□□ 0.23
C11orf54-209ENST00000530620 SSUH2Q9Y2M2 353 aa16.47■□□□□ 0.23
C11orf54-209ENST00000530620 RIMS2Q9UQ26 1411 aa16.45■□□□□ 0.22
C11orf54-209ENST00000530620 ROCK1Q13464 1354 aa16.45■□□□□ 0.22
C11orf54-209ENST00000530620 PLEKHG1Q9ULL1 1385 aa16.44■□□□□ 0.22
C11orf54-209ENST00000530620 KCNA6P17658 529 aa16.44■□□□□ 0.22
C11orf54-209ENST00000530620 SPHKAPQ2M3C7 1700 aa16.44■□□□□ 0.22
C11orf54-209ENST00000530620 RBM33Q96EV2 1170 aaKnown RBP16.43■□□□□ 0.22
C11orf54-209ENST00000530620 FAM135BQ49AJ0 1406 aa16.43■□□□□ 0.22
C11orf54-209ENST00000530620 PHLPP1O60346 1717 aa16.42■□□□□ 0.22
C11orf54-209ENST00000530620 PROSER2Q86WR7 435 aaPredicted RBP16.41■□□□□ 0.22
C11orf54-209ENST00000530620 DIP2AQ14689 1571 aa16.41■□□□□ 0.22
C11orf54-209ENST00000530620 FKBP8Q14318 412 aa16.4■□□□□ 0.22
C11orf54-209ENST00000530620 BCANQ96GW7 911 aa16.4■□□□□ 0.22
C11orf54-209ENST00000530620 PPP1R15AO75807 674 aaPredicted RBP16.39■□□□□ 0.21
C11orf54-209ENST00000530620 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.38■□□□□ 0.21
C11orf54-209ENST00000530620 MSH6P52701 1360 aa16.38■□□□□ 0.21
C11orf54-209ENST00000530620 NRXN3Q9Y4C0 1643 aa16.37■□□□□ 0.21
C11orf54-209ENST00000530620 ADAMTS13Q76LX8 1427 aa16.37■□□□□ 0.21
C11orf54-209ENST00000530620 CHGAP10645 457 aaKnown RBP16.36■□□□□ 0.21
C11orf54-209ENST00000530620 ITGAEP38570 1179 aa16.36■□□□□ 0.21
C11orf54-209ENST00000530620 COL16A1Q07092 1604 aaPredicted RBP16.36■□□□□ 0.21
C11orf54-209ENST00000530620 NUP155O75694 1391 aa16.36■□□□□ 0.21
C11orf54-209ENST00000530620 TRPM2O94759 1503 aa16.35■□□□□ 0.21
C11orf54-209ENST00000530620 PPARGC1BQ86YN6 1023 aaKnown RBP16.35■□□□□ 0.21
C11orf54-209ENST00000530620 XRN1Q8IZH2 1706 aaKnown RBP16.34■□□□□ 0.21
C11orf54-209ENST00000530620 NUTM2DQ5VT03 806 aaPredicted RBP16.34■□□□□ 0.21
C11orf54-209ENST00000530620 RGS17Q9UGC6 210 aaPredicted RBP16.33■□□□□ 0.2
C11orf54-209ENST00000530620 HDGFP51858 240 aaKnown RBP16.32■□□□□ 0.2
C11orf54-209ENST00000530620 CLTCL1P53675 1640 aa16.32■□□□□ 0.2
C11orf54-209ENST00000530620 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.32■□□□□ 0.2
C11orf54-209ENST00000530620 TBX22Q9Y458 520 aa16.32■□□□□ 0.2
C11orf54-209ENST00000530620 KIF1BO60333 1816 aa16.31■□□□□ 0.2
C11orf54-209ENST00000530620 SETBP1Q9Y6X0 1596 aa16.31■□□□□ 0.2
C11orf54-209ENST00000530620 REM2Q8IYK8 340 aaPredicted RBP16.31■□□□□ 0.2
C11orf54-209ENST00000530620 PTPRUQ92729 1446 aa16.29■□□□□ 0.2
C11orf54-209ENST00000530620 NCOA3Q9Y6Q9 1424 aa16.29■□□□□ 0.2
C11orf54-209ENST00000530620 PIK3R4Q99570 1358 aa16.29■□□□□ 0.2
C11orf54-209ENST00000530620 SETD1AO15047 1707 aaKnown RBP16.29■□□□□ 0.2
C11orf54-209ENST00000530620 SLAIN2Q9P270 581 aa16.29■□□□□ 0.2
C11orf54-209ENST00000530620 AHDC1Q5TGY3 1603 aaPredicted RBP16.29■□□□□ 0.2
C11orf54-209ENST00000530620 SHPRHQ149N8 1683 aa16.28■□□□□ 0.2
C11orf54-209ENST00000530620 NEXMIFQ5QGS0 1516 aa16.27■□□□□ 0.2
C11orf54-209ENST00000530620 RRBP1Q9P2E9 1410 aaKnown RBP16.27■□□□□ 0.19
C11orf54-209ENST00000530620 NALCNQ8IZF0 1738 aa16.26■□□□□ 0.19
C11orf54-209ENST00000530620 C14orf37Q86TY3 774 aa16.25■□□□□ 0.19
C11orf54-209ENST00000530620 JCADQ9P266 1359 aa16.25■□□□□ 0.19
C11orf54-209ENST00000530620 LRP6O75581 1613 aa16.24■□□□□ 0.19
C11orf54-209ENST00000530620 NAIPQ13075 1403 aa16.24■□□□□ 0.19
C11orf54-209ENST00000530620 NHSL1Q5SYE7 1610 aa16.23■□□□□ 0.19
C11orf54-209ENST00000530620 POTEAQ6S8J7 498 aa16.22■□□□□ 0.19
C11orf54-209ENST00000530620 AMOTL2Q9Y2J4 779 aa16.22■□□□□ 0.19
C11orf54-209ENST00000530620 DCCP43146 1447 aa16.21■□□□□ 0.19
C11orf54-209ENST00000530620 C19orf44Q9H6X5 657 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms