RNA–Protein interactions for RNA: ENST00000530036.1

RPUSD4-204, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 3

Gene RPUSD4, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-204ENST00000530036 ANKRD30BQ9BXX2 1392 aa8.38□□□□□ -1.07
RPUSD4-204ENST00000530036 FOXD1Q16676 465 aa8.38□□□□□ -1.07
RPUSD4-204ENST00000530036 RIMS2Q9UQ26 1411 aa8.37□□□□□ -1.07
RPUSD4-204ENST00000530036 NRXN3Q9Y4C0 1643 aa8.37□□□□□ -1.07
RPUSD4-204ENST00000530036 NPHP4O75161 1426 aaPredicted RBP8.37□□□□□ -1.07
RPUSD4-204ENST00000530036 DHX57Q6P158 1386 aaKnown RBP8.36□□□□□ -1.07
RPUSD4-204ENST00000530036 SETBP1Q9Y6X0 1596 aa8.36□□□□□ -1.07
RPUSD4-204ENST00000530036 LTKP29376 864 aa8.36□□□□□ -1.07
RPUSD4-204ENST00000530036 STAG3Q9UJ98 1225 aa8.36□□□□□ -1.07
RPUSD4-204ENST00000530036 SETD1AO15047 1707 aaKnown RBP8.36□□□□□ -1.07
RPUSD4-204ENST00000530036 DIP2AQ14689 1571 aa8.35□□□□□ -1.07
RPUSD4-204ENST00000530036 NCKAP5LQ9HCH0 1330 aa8.35□□□□□ -1.07
RPUSD4-204ENST00000530036 ANKLE2Q86XL3 938 aa8.35□□□□□ -1.07
RPUSD4-204ENST00000530036 STRCP1A6NGW2 1772 aa8.35□□□□□ -1.07
RPUSD4-204ENST00000530036 PLEKHG1Q9ULL1 1385 aa8.35□□□□□ -1.07
RPUSD4-204ENST00000530036 LTBP4Q8N2S1 1624 aa8.34□□□□□ -1.07
RPUSD4-204ENST00000530036 DMRT2Q9Y5R5 561 aa8.34□□□□□ -1.07
RPUSD4-204ENST00000530036 CHGAP10645 457 aaKnown RBP8.33□□□□□ -1.08
RPUSD4-204ENST00000530036 NWD1Q149M9 1564 aa8.33□□□□□ -1.08
RPUSD4-204ENST00000530036 TXNDC2Q86VQ3 553 aa8.33□□□□□ -1.08
RPUSD4-204ENST00000530036 PCGF6Q9BYE7 350 aa8.33□□□□□ -1.08
RPUSD4-204ENST00000530036 CHD2O14647 1828 aaKnown RBP8.33□□□□□ -1.08
RPUSD4-204ENST00000530036 MYOM2P54296 1465 aa8.32□□□□□ -1.08
RPUSD4-204ENST00000530036 ADAMTS13Q76LX8 1427 aa8.32□□□□□ -1.08
RPUSD4-204ENST00000530036 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.32□□□□□ -1.08
RPUSD4-204ENST00000530036 EID1Q9Y6B2 187 aa8.32□□□□□ -1.08
RPUSD4-204ENST00000530036 LAMC1P11047 1609 aa8.32□□□□□ -1.08
RPUSD4-204ENST00000530036 NRXN1Q9ULB1 1477 aa8.32□□□□□ -1.08
RPUSD4-204ENST00000530036 RPGRIP1LQ68CZ1 1315 aa8.31□□□□□ -1.08
RPUSD4-204ENST00000530036 XRN1Q8IZH2 1706 aaKnown RBP8.31□□□□□ -1.08
RPUSD4-204ENST00000530036 HDGFP51858 240 aaKnown RBP8.3□□□□□ -1.08
RPUSD4-204ENST00000530036 ZNF326Q5BKZ1 582 aaKnown RBP8.3□□□□□ -1.08
RPUSD4-204ENST00000530036 XIRP1Q702N8 1843 aaKnown RBP8.3□□□□□ -1.08
RPUSD4-204ENST00000530036 PIK3C2GO75747 1445 aa8.29□□□□□ -1.08
RPUSD4-204ENST00000530036 CPS1P31327 1500 aa8.29□□□□□ -1.08
RPUSD4-204ENST00000530036 ALKQ9UM73 1620 aa8.29□□□□□ -1.08
RPUSD4-204ENST00000530036 PPP1R15AO75807 674 aaPredicted RBP8.29□□□□□ -1.08
RPUSD4-204ENST00000530036 NKTRP30414 1462 aaKnown RBP8.29□□□□□ -1.08
RPUSD4-204ENST00000530036 ASXL1Q8IXJ9 1541 aa8.29□□□□□ -1.08
RPUSD4-204ENST00000530036 IQSEC2Q5JU85 1478 aa8.28□□□□□ -1.08
RPUSD4-204ENST00000530036 PIK3R4Q99570 1358 aa8.28□□□□□ -1.08
RPUSD4-204ENST00000530036 NUTM2DQ5VT03 806 aaPredicted RBP8.28□□□□□ -1.08
RPUSD4-204ENST00000530036 KNDC1Q76NI1 1749 aa8.28□□□□□ -1.08
RPUSD4-204ENST00000530036 KIAA1210Q9ULL0 1709 aa8.28□□□□□ -1.08
RPUSD4-204ENST00000530036 PRAG1Q86YV5 1406 aa8.28□□□□□ -1.08
RPUSD4-204ENST00000530036 ZNF335Q9H4Z2 1342 aaPredicted RBP8.28□□□□□ -1.08
RPUSD4-204ENST00000530036 VGFO15240 615 aaPredicted RBP8.27□□□□□ -1.09
RPUSD4-204ENST00000530036 RGL3Q3MIN7 710 aa8.27□□□□□ -1.09
RPUSD4-204ENST00000530036 ADGRF5Q8IZF2 1346 aa8.27□□□□□ -1.09
RPUSD4-204ENST00000530036 LRRC7Q96NW7 1537 aa8.26□□□□□ -1.09
RPUSD4-204ENST00000530036 SLC26A8Q96RN1 970 aa8.26□□□□□ -1.09
RPUSD4-204ENST00000530036 TBX22Q9Y458 520 aa8.26□□□□□ -1.09
RPUSD4-204ENST00000530036 PTPRUQ92729 1446 aa8.26□□□□□ -1.09
RPUSD4-204ENST00000530036 CLSPNQ9HAW4 1339 aa8.26□□□□□ -1.09
RPUSD4-204ENST00000530036 STAC3Q96MF2 364 aa8.25□□□□□ -1.09
RPUSD4-204ENST00000530036 ADGRB1O14514 1584 aa8.25□□□□□ -1.09
RPUSD4-204ENST00000530036 TRPM1Q7Z4N2 1603 aa8.25□□□□□ -1.09
RPUSD4-204ENST00000530036 METP08581 1390 aa8.24□□□□□ -1.09
RPUSD4-204ENST00000530036 SIN3AQ96ST3 1273 aa8.24□□□□□ -1.09
RPUSD4-204ENST00000530036 NALCNQ8IZF0 1738 aa8.23□□□□□ -1.09
RPUSD4-204ENST00000530036 TECPR2O15040 1411 aa8.23□□□□□ -1.09
RPUSD4-204ENST00000530036 PTCH1Q13635 1447 aa8.23□□□□□ -1.09
RPUSD4-204ENST00000530036 KCNA6P17658 529 aa8.23□□□□□ -1.09
RPUSD4-204ENST00000530036 DCAF11Q8TEB1 546 aa8.22□□□□□ -1.09
RPUSD4-204ENST00000530036 BCANQ96GW7 911 aa8.22□□□□□ -1.09
RPUSD4-204ENST00000530036 SENP3Q9H4L4 574 aaPredicted RBP8.22□□□□□ -1.09
RPUSD4-204ENST00000530036 ARHGEF28Q8N1W1 1705 aaKnown RBP8.22□□□□□ -1.09
RPUSD4-204ENST00000530036 PHF23Q9BUL5 403 aaPredicted RBP8.21□□□□□ -1.1
RPUSD4-204ENST00000530036 C14orf93Q9H972 538 aaKnown RBP8.21□□□□□ -1.1
RPUSD4-204ENST00000530036 YTHDC2Q9H6S0 1430 aaKnown RBP8.2□□□□□ -1.1
RPUSD4-204ENST00000530036 NCOA3Q9Y6Q9 1424 aa8.2□□□□□ -1.1
RPUSD4-204ENST00000530036 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.2□□□□□ -1.1
RPUSD4-204ENST00000530036 DLC1Q96QB1 1528 aa8.2□□□□□ -1.1
RPUSD4-204ENST00000530036 L3MBTL2Q969R5 705 aa8.2□□□□□ -1.1
RPUSD4-204ENST00000530036 LRPPRCP42704 1394 aaKnown RBP8.2□□□□□ -1.1
RPUSD4-204ENST00000530036 TMEM94Q12767 1356 aa8.2□□□□□ -1.1
RPUSD4-204ENST00000530036 TONSLQ96HA7 1378 aa8.2□□□□□ -1.1
RPUSD4-204ENST00000530036 UBAP1LF5GYI3 381 aa8.19□□□□□ -1.1
RPUSD4-204ENST00000530036 NEUROD1Q13562 356 aa8.19□□□□□ -1.1
RPUSD4-204ENST00000530036 CFAP70Q5T0N1 1121 aa8.19□□□□□ -1.1
RPUSD4-204ENST00000530036 AMOTL2Q9Y2J4 779 aa8.19□□□□□ -1.1
RPUSD4-204ENST00000530036 ABCC11Q96J66 1382 aa8.19□□□□□ -1.1
RPUSD4-204ENST00000530036 ROBO2Q9HCK4 1378 aa8.19□□□□□ -1.1
RPUSD4-204ENST00000530036 KDM2AQ9Y2K7 1162 aa8.18□□□□□ -1.1
RPUSD4-204ENST00000530036 DCCP43146 1447 aa8.18□□□□□ -1.1
RPUSD4-204ENST00000530036 FAM135BQ49AJ0 1406 aa8.18□□□□□ -1.1
RPUSD4-204ENST00000530036 ADGRL3Q9HAR2 1447 aa8.18□□□□□ -1.1
RPUSD4-204ENST00000530036 RALGAPBQ86X10 1494 aa8.18□□□□□ -1.1
RPUSD4-204ENST00000530036 ADGRB2O60241 1585 aa8.18□□□□□ -1.1
RPUSD4-204ENST00000530036 CDC42BPGQ6DT37 1551 aa8.18□□□□□ -1.1
RPUSD4-204ENST00000530036 PROSER2Q86WR7 435 aaPredicted RBP8.17□□□□□ -1.1
RPUSD4-204ENST00000530036 MED1Q15648 1581 aaPredicted RBP8.16□□□□□ -1.1
RPUSD4-204ENST00000530036 GPRASP1Q5JY77 1395 aa8.16□□□□□ -1.1
RPUSD4-204ENST00000530036 TMEM132EQ6IEE7 984 aa8.16□□□□□ -1.1
RPUSD4-204ENST00000530036 CCER1Q8TC90 406 aaPredicted RBP8.16□□□□□ -1.1
RPUSD4-204ENST00000530036 FMN2Q9NZ56 1722 aa8.16□□□□□ -1.1
RPUSD4-204ENST00000530036 QRICH2Q9H0J4 1663 aa8.15□□□□□ -1.1
RPUSD4-204ENST00000530036 MSH6P52701 1360 aa8.15□□□□□ -1.1
RPUSD4-204ENST00000530036 SCAF1Q9H7N4 1312 aaKnown RBP8.15□□□□□ -1.1
RPUSD4-204ENST00000530036 SIRT1Q96EB6 747 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms