RNA–Protein interactions for RNA: ENST00000529873.5

CTNND1-221, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,931 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-221ENST00000529873 PRKRIP1Q9H875 184 aaPredicted RBP10.44□□□□□ -0.74
CTNND1-221ENST00000529873 KIF21BO75037 1637 aa10.44□□□□□ -0.74
CTNND1-221ENST00000529873 NEXNQ0ZGT2 675 aa10.43□□□□□ -0.74
CTNND1-221ENST00000529873 CREBRFQ8IUR6 639 aa10.43□□□□□ -0.74
CTNND1-221ENST00000529873 ARHGAP5Q13017 1502 aa10.43□□□□□ -0.74
CTNND1-221ENST00000529873 TEFQ10587 303 aa10.43□□□□□ -0.74
CTNND1-221ENST00000529873 AMOTL1Q8IY63 956 aa10.43□□□□□ -0.74
CTNND1-221ENST00000529873 MIA2Q96PC5 1412 aa10.43□□□□□ -0.74
CTNND1-221ENST00000529873 SKOR2Q2VWA4 1001 aaPredicted RBP10.43□□□□□ -0.74
CTNND1-221ENST00000529873 DDX19BQ9UMR2 479 aa10.43□□□□□ -0.74
CTNND1-221ENST00000529873 FOXD4L5Q5VV16 416 aaPredicted RBP10.43□□□□□ -0.74
CTNND1-221ENST00000529873 FOXD4L4Q8WXT5 416 aaPredicted RBP10.43□□□□□ -0.74
CTNND1-221ENST00000529873 ATP6V1DQ9Y5K8 247 aa10.43□□□□□ -0.74
CTNND1-221ENST00000529873 RUFY2Q8WXA3 655 aa10.42□□□□□ -0.74
CTNND1-221ENST00000529873 AKAP17AQ02040 695 aaKnown RBP10.42□□□□□ -0.74
CTNND1-221ENST00000529873 NGEFQ8N5V2 710 aa10.42□□□□□ -0.74
CTNND1-221ENST00000529873 NOL10Q9BSC4 688 aaKnown RBP10.42□□□□□ -0.74
CTNND1-221ENST00000529873 DIAPH3Q9NSV4 1193 aa10.42□□□□□ -0.74
CTNND1-221ENST00000529873 TPM3P06753 285 aa10.42□□□□□ -0.74
CTNND1-221ENST00000529873 TPM2P07951 284 aa10.42□□□□□ -0.74
CTNND1-221ENST00000529873 SYNE3Q6ZMZ3 975 aa10.42□□□□□ -0.74
CTNND1-221ENST00000529873 TPD52L1Q16890 204 aaPredicted RBP10.42□□□□□ -0.74
CTNND1-221ENST00000529873 LRRC9Q6ZRR7 1453 aa10.42□□□□□ -0.74
CTNND1-221ENST00000529873 PLIN1O60240 522 aa10.42□□□□□ -0.74
CTNND1-221ENST00000529873 EXOC6Q8TAG9 804 aa10.41□□□□□ -0.74
CTNND1-221ENST00000529873 RUNDC1Q96C34 613 aa10.41□□□□□ -0.74
CTNND1-221ENST00000529873 BCL2L13Q9BXK5 485 aa10.41□□□□□ -0.74
CTNND1-221ENST00000529873 OSCARQ8IYS5 282 aa10.41□□□□□ -0.74
CTNND1-221ENST00000529873 CASKIN1Q8WXD9 1431 aa10.41□□□□□ -0.74
CTNND1-221ENST00000529873 ELL2O00472 640 aaPredicted RBP10.41□□□□□ -0.74
CTNND1-221ENST00000529873 API5Q9BZZ5 524 aaKnown RBP10.41□□□□□ -0.74
CTNND1-221ENST00000529873 DDX58O95786 925 aaKnown RBP10.4□□□□□ -0.74
CTNND1-221ENST00000529873 PDE4AP27815 886 aa10.4□□□□□ -0.74
CTNND1-221ENST00000529873 EIF2S2P20042 333 aaKnown RBP10.4□□□□□ -0.74
CTNND1-221ENST00000529873 RIPK4P57078 832 aa10.4□□□□□ -0.74
CTNND1-221ENST00000529873 C9orf78Q9NZ63 289 aaPredicted RBP10.4□□□□□ -0.74
CTNND1-221ENST00000529873 IGF1RP08069 1367 aa10.4□□□□□ -0.74
CTNND1-221ENST00000529873 CNTLNQ9NXG0 1405 aa10.4□□□□□ -0.74
CTNND1-221ENST00000529873 STAC3Q96MF2 364 aa10.4□□□□□ -0.74
CTNND1-221ENST00000529873 ANO2Q9NQ90 1003 aa10.4□□□□□ -0.74
CTNND1-221ENST00000529873 PRM3Q9NNZ6 103 aa10.4□□□□□ -0.74
CTNND1-221ENST00000529873 PSME1Q06323 249 aa10.4□□□□□ -0.75
CTNND1-221ENST00000529873 TRIM34Q9BYJ4 488 aa10.4□□□□□ -0.75
CTNND1-221ENST00000529873 IFIT2P09913 472 aaKnown RBP10.39□□□□□ -0.75
CTNND1-221ENST00000529873 ARID3AQ99856 593 aa10.39□□□□□ -0.75
CTNND1-221ENST00000529873 RRBP1Q9P2E9 1410 aaKnown RBP10.39□□□□□ -0.75
CTNND1-221ENST00000529873 NCOA2Q15596 1464 aa10.39□□□□□ -0.75
CTNND1-221ENST00000529873 CEP89Q96ST8 783 aa10.39□□□□□ -0.75
CTNND1-221ENST00000529873 COG6Q9Y2V7 657 aa10.39□□□□□ -0.75
CTNND1-221ENST00000529873 DZIP1LQ8IYY4 767 aaKnown RBP10.39□□□□□ -0.75
CTNND1-221ENST00000529873 REC8O95072 547 aa10.38□□□□□ -0.75
CTNND1-221ENST00000529873 TRIM29Q14134 588 aa10.38□□□□□ -0.75
CTNND1-221ENST00000529873 ERICH3Q5RHP9 1530 aa10.38□□□□□ -0.75
CTNND1-221ENST00000529873 APAF1O14727 1248 aa10.38□□□□□ -0.75
CTNND1-221ENST00000529873 MEX3CQ5U5Q3 659 aaKnown RBP10.38□□□□□ -0.75
CTNND1-221ENST00000529873 EHBP1L1Q8N3D4 1523 aa10.38□□□□□ -0.75
CTNND1-221ENST00000529873 GOLGA6L19H0YKK7 550 aa10.37□□□□□ -0.75
CTNND1-221ENST00000529873 TSR1Q2NL82 804 aaKnown RBP10.37□□□□□ -0.75
CTNND1-221ENST00000529873 CCDC7Q96M83 1385 aa10.37□□□□□ -0.75
CTNND1-221ENST00000529873 NCAPD3P42695 1498 aa10.37□□□□□ -0.75
CTNND1-221ENST00000529873 GNAI1P63096 354 aa10.37□□□□□ -0.75
CTNND1-221ENST00000529873 TPM1P09493 284 aa10.36□□□□□ -0.75
CTNND1-221ENST00000529873 ZKSCAN1P17029 563 aaPredicted RBP10.36□□□□□ -0.75
CTNND1-221ENST00000529873 GPS2Q13227 327 aa10.36□□□□□ -0.75
CTNND1-221ENST00000529873 HECW1Q76N89 1606 aa10.36□□□□□ -0.75
CTNND1-221ENST00000529873 PES1O00541 588 aaKnown RBP10.36□□□□□ -0.75
CTNND1-221ENST00000529873 G3BP1Q13283 466 aaKnown RBP eCLIP10.36□□□□□ -0.758e-9■□□□□ 11.1
CTNND1-221ENST00000529873 CYB5RLQ6IPT4 315 aa10.36□□□□□ -0.75
CTNND1-221ENST00000529873 GRIN2BQ13224 1484 aa10.36□□□□□ -0.75
CTNND1-221ENST00000529873 EFCAB5A4FU69 1503 aa10.36□□□□□ -0.75
CTNND1-221ENST00000529873 MCTP1Q6DN14 999 aa10.36□□□□□ -0.75
CTNND1-221ENST00000529873 DDX49Q9Y6V7 483 aaKnown RBP10.36□□□□□ -0.75
CTNND1-221ENST00000529873 TSPYL4Q9UJ04 414 aa10.35□□□□□ -0.75
CTNND1-221ENST00000529873 MSH5O43196 834 aa10.35□□□□□ -0.75
CTNND1-221ENST00000529873 RNF20Q5VTR2 975 aa10.35□□□□□ -0.75
CTNND1-221ENST00000529873 ANKRD50Q9ULJ7 1429 aa10.35□□□□□ -0.75
CTNND1-221ENST00000529873 CTDP1Q9Y5B0 961 aaPredicted RBP10.35□□□□□ -0.75
CTNND1-221ENST00000529873 INTS3Q68E01 1043 aaKnown RBP10.35□□□□□ -0.75
CTNND1-221ENST00000529873 NECTIN2Q92692 538 aa10.35□□□□□ -0.75
CTNND1-221ENST00000529873 SYNJ2O15056 1496 aa10.35□□□□□ -0.75
CTNND1-221ENST00000529873 HSP90AB4PQ58FF6 505 aa10.35□□□□□ -0.75
CTNND1-221ENST00000529873 CPLX2Q6PUV4 134 aaKnown RBP10.35□□□□□ -0.75
CTNND1-221ENST00000529873 AQRO60306 1485 aaKnown RBP eCLIP10.35□□□□□ -0.752e-9■■■□□ 18.1
CTNND1-221ENST00000529873 TCEAL9Q9UHQ7 104 aa10.35□□□□□ -0.75
CTNND1-221ENST00000529873 AAMPQ13685 434 aa10.34□□□□□ -0.75
CTNND1-221ENST00000529873 CCDC47Q96A33 483 aaKnown RBP10.34□□□□□ -0.75
CTNND1-221ENST00000529873 FAM69CQ0P6D2 419 aa10.34□□□□□ -0.75
CTNND1-221ENST00000529873 VPS37DQ86XT2 251 aa10.34□□□□□ -0.75
CTNND1-221ENST00000529873 BECN2A8MW95 431 aa10.34□□□□□ -0.75
CTNND1-221ENST00000529873 HOOK1Q9UJC3 728 aaKnown RBP10.34□□□□□ -0.75
CTNND1-221ENST00000529873 NINLQ9Y2I6 1382 aa10.34□□□□□ -0.75
CTNND1-221ENST00000529873 ERC2O15083 957 aa10.34□□□□□ -0.75
CTNND1-221ENST00000529873 FKBP5Q13451 457 aaPredicted RBP10.34□□□□□ -0.75
CTNND1-221ENST00000529873 KIF7Q2M1P5 1343 aa10.33□□□□□ -0.76
CTNND1-221ENST00000529873 SCAPERQ9BY12 1400 aa10.33□□□□□ -0.76
CTNND1-221ENST00000529873 ERICH2A1L162 156 aa10.33□□□□□ -0.76
CTNND1-221ENST00000529873 RRP12Q5JTH9 1297 aaKnown RBP10.33□□□□□ -0.76
CTNND1-221ENST00000529873 ATF3P18847 181 aa10.32□□□□□ -0.76
CTNND1-221ENST00000529873 CCDC70Q6NSX1 233 aa10.32□□□□□ -0.76
CTNND1-221ENST00000529873 NFXL1Q6ZNB6 911 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms