RNA–Protein interactions for RNA: ENST00000529332.5

TM9SF1-208, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 5

Gene TM9SF1, Length 2,107 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-208ENST00000529332 KDM2AQ9Y2K7 1162 aa21.5■■□□□ 1.03
TM9SF1-208ENST00000529332 PIK3C2BO00750 1634 aa21.5■■□□□ 1.03
TM9SF1-208ENST00000529332 SYNMO15061 1565 aa21.49■■□□□ 1.03
TM9SF1-208ENST00000529332 STAC3Q96MF2 364 aa21.49■■□□□ 1.03
TM9SF1-208ENST00000529332 ARID4BQ4LE39 1312 aaPredicted RBP21.48■■□□□ 1.03
TM9SF1-208ENST00000529332 PRAG1Q86YV5 1406 aa21.48■■□□□ 1.03
TM9SF1-208ENST00000529332 ADGRB3O60242 1522 aa21.48■■□□□ 1.03
TM9SF1-208ENST00000529332 TRPM1Q7Z4N2 1603 aa21.47■■□□□ 1.03
TM9SF1-208ENST00000529332 MROH2AA6NES4 1674 aa21.47■■□□□ 1.03
TM9SF1-208ENST00000529332 MLECQ14165 292 aa21.47■■□□□ 1.03
TM9SF1-208ENST00000529332 ESF1Q9H501 851 aaKnown RBP21.47■■□□□ 1.03
TM9SF1-208ENST00000529332 CNGB1Q14028 1251 aaPredicted RBP21.46■■□□□ 1.03
TM9SF1-208ENST00000529332 PPP4R2Q9NY27 417 aa21.45■■□□□ 1.02
TM9SF1-208ENST00000529332 IFT172Q9UG01 1749 aa21.45■■□□□ 1.02
TM9SF1-208ENST00000529332 CARD11Q9BXL7 1154 aa21.44■■□□□ 1.02
TM9SF1-208ENST00000529332 ERVK-7P63135 1459 aa21.44■■□□□ 1.02
TM9SF1-208ENST00000529332 MADDQ8WXG6 1647 aa21.43■■□□□ 1.02
TM9SF1-208ENST00000529332 SLC52A1Q9NWF4 448 aa21.41■■□□□ 1.02
TM9SF1-208ENST00000529332 SPATA31D1Q6ZQQ2 1576 aa21.41■■□□□ 1.02
TM9SF1-208ENST00000529332 MYOM2P54296 1465 aa21.4■■□□□ 1.02
TM9SF1-208ENST00000529332 ROCK2O75116 1388 aaKnown RBP21.4■■□□□ 1.02
TM9SF1-208ENST00000529332 LAMC1P11047 1609 aa21.4■■□□□ 1.02
TM9SF1-208ENST00000529332 PPLO60437 1756 aa21.39■■□□□ 1.01
TM9SF1-208ENST00000529332 ST20-MTHFSA0A0A6YYL1 179 aa21.38■■□□□ 1.01
TM9SF1-208ENST00000529332 CHGAP10645 457 aaKnown RBP21.38■■□□□ 1.01
TM9SF1-208ENST00000529332 SMG6Q86US8 1419 aaKnown RBP21.37■■□□□ 1.01
TM9SF1-208ENST00000529332 KIAA1210Q9ULL0 1709 aa21.37■■□□□ 1.01
TM9SF1-208ENST00000529332 FER1L4A9Z1Z3 1794 aa21.36■■□□□ 1.01
TM9SF1-208ENST00000529332 ZMYM3Q14202 1370 aa21.35■■□□□ 1.01
TM9SF1-208ENST00000529332 RPGRIP1LQ68CZ1 1315 aa21.35■■□□□ 1.01
TM9SF1-208ENST00000529332 GPRASP1Q5JY77 1395 aa21.34■■□□□ 1.01
TM9SF1-208ENST00000529332 B4GALNT3Q6L9W6 998 aa21.34■■□□□ 1.01
TM9SF1-208ENST00000529332 PNISRQ8TF01 805 aaKnown RBP21.34■■□□□ 1.01
TM9SF1-208ENST00000529332 FBXO31Q5XUX0 539 aaPredicted RBP21.34■■□□□ 1.01
TM9SF1-208ENST00000529332 TMEM131LA2VDJ0 1609 aa21.34■■□□□ 1.01
TM9SF1-208ENST00000529332 IDI1Q13907 227 aa21.33■■□□□ 1.01
TM9SF1-208ENST00000529332 MYO5BQ9ULV0 1848 aa21.33■■□□□ 1
TM9SF1-208ENST00000529332 MSH5O43196 834 aa21.31■■□□□ 1
TM9SF1-208ENST00000529332 NUDCQ9Y266 331 aa21.31■■□□□ 1
TM9SF1-208ENST00000529332 NRXN1Q9ULB1 1477 aa21.31■■□□□ 1
TM9SF1-208ENST00000529332 TMC1Q8TDI8 760 aa21.29■■□□□ 1
TM9SF1-208ENST00000529332 NEXMIFQ5QGS0 1516 aa21.29■■□□□ 1
TM9SF1-208ENST00000529332 FANCIQ9NVI1 1328 aa21.28■■□□□ 1
TM9SF1-208ENST00000529332 SENP3-EIF4A1A0A087X0R7 540 aa21.28■■□□□ 1
TM9SF1-208ENST00000529332 RNF123Q5XPI4 1314 aa21.27■■□□□ 1
TM9SF1-208ENST00000529332 C3P01024 1663 aa21.26■□□□□ 0.99
TM9SF1-208ENST00000529332 LRPPRCP42704 1394 aaKnown RBP21.26■□□□□ 0.99
TM9SF1-208ENST00000529332 NBPF1Q3BBV0 1214 aa21.26■□□□□ 0.99
TM9SF1-208ENST00000529332 TNRQ92752 1358 aa21.25■□□□□ 0.99
TM9SF1-208ENST00000529332 IQGAP1P46940 1657 aa21.25■□□□□ 0.99
TM9SF1-208ENST00000529332 ADGRF5Q8IZF2 1346 aa21.25■□□□□ 0.99
TM9SF1-208ENST00000529332 MYBBP1AQ9BQG0 1328 aaKnown RBP21.25■□□□□ 0.99
TM9SF1-208ENST00000529332 KDM5AP29375 1690 aaKnown RBP21.25■□□□□ 0.99
TM9SF1-208ENST00000529332 STAG3Q9UJ98 1225 aa21.25■□□□□ 0.99
TM9SF1-208ENST00000529332 BRD4O60885 1362 aaPredicted RBP21.24■□□□□ 0.99
TM9SF1-208ENST00000529332 KTN1Q86UP2 1357 aaKnown RBP21.24■□□□□ 0.99
TM9SF1-208ENST00000529332 VGFO15240 615 aaPredicted RBP21.23■□□□□ 0.99
TM9SF1-208ENST00000529332 RALBP1Q15311 655 aa21.23■□□□□ 0.99
TM9SF1-208ENST00000529332 PIK3C2GO75747 1445 aa21.23■□□□□ 0.99
TM9SF1-208ENST00000529332 ZFYVE9O95405 1425 aa21.23■□□□□ 0.99
TM9SF1-208ENST00000529332 SETBP1Q9Y6X0 1596 aa21.22■□□□□ 0.99
TM9SF1-208ENST00000529332 A2ML1A8K2U0 1454 aa21.2■□□□□ 0.98
TM9SF1-208ENST00000529332 SCAF11Q99590 1463 aaKnown RBP21.2■□□□□ 0.98
TM9SF1-208ENST00000529332 NLRP1Q9C000 1473 aa21.18■□□□□ 0.98
TM9SF1-208ENST00000529332 RIMS1Q86UR5 1692 aaKnown RBP21.18■□□□□ 0.98
TM9SF1-208ENST00000529332 EIF3AQ14152 1382 aaKnown RBP21.18■□□□□ 0.98
TM9SF1-208ENST00000529332 ADAMTSL3P82987 1691 aa21.17■□□□□ 0.98
TM9SF1-208ENST00000529332 CFAP70Q5T0N1 1121 aa21.17■□□□□ 0.98
TM9SF1-208ENST00000529332 PARD3Q8TEW0 1356 aa21.16■□□□□ 0.98
TM9SF1-208ENST00000529332 UBR1Q8IWV7 1749 aa21.16■□□□□ 0.98
TM9SF1-208ENST00000529332 PER1O15534 1290 aaPredicted RBP21.15■□□□□ 0.98
TM9SF1-208ENST00000529332 C14orf93Q9H972 538 aaKnown RBP21.14■□□□□ 0.98
TM9SF1-208ENST00000529332 TESK2Q96S53 571 aa21.14■□□□□ 0.97
TM9SF1-208ENST00000529332 DISP3Q9P2K9 1392 aa21.13■□□□□ 0.97
TM9SF1-208ENST00000529332 RIMS2Q9UQ26 1411 aa21.13■□□□□ 0.97
TM9SF1-208ENST00000529332 NLRP13Q86W25 1043 aa21.13■□□□□ 0.97
TM9SF1-208ENST00000529332 CEBPAP49715 358 aaPredicted RBP21.11■□□□□ 0.97
TM9SF1-208ENST00000529332 ADGRB1O14514 1584 aa21.11■□□□□ 0.97
TM9SF1-208ENST00000529332 NUTM2DQ5VT03 806 aaPredicted RBP21.11■□□□□ 0.97
TM9SF1-208ENST00000529332 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.1■□□□□ 0.97
TM9SF1-208ENST00000529332 HDGFP51858 240 aaKnown RBP21.1■□□□□ 0.97
TM9SF1-208ENST00000529332 MYO3AQ8NEV4 1616 aa21.1■□□□□ 0.97
TM9SF1-208ENST00000529332 CCDC136Q96JN2 1154 aa21.09■□□□□ 0.97
TM9SF1-208ENST00000529332 SLC24A1O60721 1099 aa21.06■□□□□ 0.96
TM9SF1-208ENST00000529332 ALKQ9UM73 1620 aa21.05■□□□□ 0.96
TM9SF1-208ENST00000529332 TMF1P82094 1093 aa21.05■□□□□ 0.96
TM9SF1-208ENST00000529332 PLPPR3Q6T4P5 718 aa21.05■□□□□ 0.96
TM9SF1-208ENST00000529332 PANK3Q9H999 370 aa21.04■□□□□ 0.96
TM9SF1-208ENST00000529332 TMEM2Q9UHN6 1383 aa21.04■□□□□ 0.96
TM9SF1-208ENST00000529332 CC2D1BQ5T0F9 858 aaKnown RBP21.04■□□□□ 0.96
TM9SF1-208ENST00000529332 SALL2Q9Y467 1007 aaPredicted RBP21.04■□□□□ 0.96
TM9SF1-208ENST00000529332 ARHGEF28Q8N1W1 1705 aaKnown RBP21.02■□□□□ 0.96
TM9SF1-208ENST00000529332 RRP1P56182 461 aaKnown RBP21.02■□□□□ 0.96
TM9SF1-208ENST00000529332 ASXL1Q8IXJ9 1541 aa21.01■□□□□ 0.95
TM9SF1-208ENST00000529332 QRICH2Q9H0J4 1663 aa21.01■□□□□ 0.95
TM9SF1-208ENST00000529332 CEP170BQ9Y4F5 1589 aaPredicted RBP21.01■□□□□ 0.95
TM9SF1-208ENST00000529332 SETD1AO15047 1707 aaKnown RBP21■□□□□ 0.95
TM9SF1-208ENST00000529332 CDCA8Q53HL2 280 aa21■□□□□ 0.95
TM9SF1-208ENST00000529332 TMEM132EQ6IEE7 984 aa21■□□□□ 0.95
TM9SF1-208ENST00000529332 SLIT1O75093 1534 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms