RNA–Protein interactions for RNA: ENST00000528739.5

CAPN1-216, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 341 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-216ENST00000528739 CPS1P31327 1500 aa21.33■■□□□ 1
CAPN1-216ENST00000528739 RIMS2Q9UQ26 1411 aa21.32■■□□□ 1
CAPN1-216ENST00000528739 TOM1O60784 492 aa21.31■■□□□ 1
CAPN1-216ENST00000528739 PIP4K2BP78356 416 aa21.31■■□□□ 1
CAPN1-216ENST00000528739 KDM5AP29375 1690 aaKnown RBP21.29■■□□□ 1
CAPN1-216ENST00000528739 TMEM131LA2VDJ0 1609 aa21.26■□□□□ 0.99
CAPN1-216ENST00000528739 FOXD1Q16676 465 aa21.25■□□□□ 0.99
CAPN1-216ENST00000528739 KCNA6P17658 529 aa21.24■□□□□ 0.99
CAPN1-216ENST00000528739 PROSER2Q86WR7 435 aaPredicted RBP21.24■□□□□ 0.99
CAPN1-216ENST00000528739 PLEKHG1Q9ULL1 1385 aa21.23■□□□□ 0.99
CAPN1-216ENST00000528739 ZFYVE9O95405 1425 aa21.23■□□□□ 0.99
CAPN1-216ENST00000528739 MPHOSPH9Q99550 1183 aa21.22■□□□□ 0.99
CAPN1-216ENST00000528739 SETD5Q9C0A6 1442 aa21.21■□□□□ 0.99
CAPN1-216ENST00000528739 LRRC7Q96NW7 1537 aa21.21■□□□□ 0.99
CAPN1-216ENST00000528739 MYO5BQ9ULV0 1848 aa21.21■□□□□ 0.99
CAPN1-216ENST00000528739 RBM33Q96EV2 1170 aaKnown RBP21.21■□□□□ 0.99
CAPN1-216ENST00000528739 SPHKAPQ2M3C7 1700 aa21.21■□□□□ 0.99
CAPN1-216ENST00000528739 TBX22Q9Y458 520 aa21.18■□□□□ 0.98
CAPN1-216ENST00000528739 ACIN1Q9UKV3 1341 aaKnown RBP21.17■□□□□ 0.98
CAPN1-216ENST00000528739 STRCP1A6NGW2 1772 aa21.16■□□□□ 0.98
CAPN1-216ENST00000528739 TRPM2O94759 1503 aa21.15■□□□□ 0.98
CAPN1-216ENST00000528739 C14orf37Q86TY3 774 aa21.15■□□□□ 0.98
CAPN1-216ENST00000528739 TMEM94Q12767 1356 aa21.14■□□□□ 0.98
CAPN1-216ENST00000528739 RAB3GAP2Q9H2M9 1393 aa21.13■□□□□ 0.97
CAPN1-216ENST00000528739 CLTCL1P53675 1640 aa21.13■□□□□ 0.97
CAPN1-216ENST00000528739 RGL3Q3MIN7 710 aa21.12■□□□□ 0.97
CAPN1-216ENST00000528739 VGFO15240 615 aaPredicted RBP21.1■□□□□ 0.97
CAPN1-216ENST00000528739 HSPA1LP34931 641 aa21.1■□□□□ 0.97
CAPN1-216ENST00000528739 CCDC144AA2RUR9 1427 aa21.1■□□□□ 0.97
CAPN1-216ENST00000528739 AMOTL2Q9Y2J4 779 aa21.09■□□□□ 0.97
CAPN1-216ENST00000528739 ADAMTS13Q76LX8 1427 aa21.09■□□□□ 0.97
CAPN1-216ENST00000528739 MSH6P52701 1360 aa21.07■□□□□ 0.96
CAPN1-216ENST00000528739 RPGRIP1LQ68CZ1 1315 aa21.06■□□□□ 0.96
CAPN1-216ENST00000528739 KIF1BO60333 1816 aa21.06■□□□□ 0.96
CAPN1-216ENST00000528739 PIK3R4Q99570 1358 aa21.05■□□□□ 0.96
CAPN1-216ENST00000528739 NKTRP30414 1462 aaKnown RBP21.05■□□□□ 0.96
CAPN1-216ENST00000528739 DIP2AQ14689 1571 aa21.03■□□□□ 0.96
CAPN1-216ENST00000528739 DISP3Q9P2K9 1392 aa21.02■□□□□ 0.96
CAPN1-216ENST00000528739 NEXMIFQ5QGS0 1516 aa21.02■□□□□ 0.96
CAPN1-216ENST00000528739 NWD1Q149M9 1564 aa21.02■□□□□ 0.95
CAPN1-216ENST00000528739 ATF3P18847 181 aa21■□□□□ 0.95
CAPN1-216ENST00000528739 METP08581 1390 aa20.99■□□□□ 0.95
CAPN1-216ENST00000528739 PTPRUQ92729 1446 aa20.99■□□□□ 0.95
CAPN1-216ENST00000528739 CHD2O14647 1828 aaKnown RBP20.99■□□□□ 0.95
CAPN1-216ENST00000528739 SLAIN2Q9P270 581 aa20.98■□□□□ 0.95
CAPN1-216ENST00000528739 SETBP1Q9Y6X0 1596 aa20.97■□□□□ 0.95
CAPN1-216ENST00000528739 C19orf44Q9H6X5 657 aa20.97■□□□□ 0.95
CAPN1-216ENST00000528739 XIRP1Q702N8 1843 aaKnown RBP20.97■□□□□ 0.95
CAPN1-216ENST00000528739 ALKQ9UM73 1620 aa20.96■□□□□ 0.95
CAPN1-216ENST00000528739 HRCP23327 699 aa20.96■□□□□ 0.95
CAPN1-216ENST00000528739 CADPS2Q86UW7 1296 aa20.95■□□□□ 0.94
CAPN1-216ENST00000528739 ADGRF5Q8IZF2 1346 aa20.95■□□□□ 0.94
CAPN1-216ENST00000528739 NCOA3Q9Y6Q9 1424 aa20.94■□□□□ 0.94
CAPN1-216ENST00000528739 NRXN3Q9Y4C0 1643 aa20.93■□□□□ 0.94
CAPN1-216ENST00000528739 ANKRD30BQ9BXX2 1392 aa20.93■□□□□ 0.94
CAPN1-216ENST00000528739 FAM135BQ49AJ0 1406 aa20.92■□□□□ 0.94
CAPN1-216ENST00000528739 SPATA31E1Q6ZUB1 1445 aa20.91■□□□□ 0.94
CAPN1-216ENST00000528739 STK26Q9P289 416 aa20.91■□□□□ 0.94
CAPN1-216ENST00000528739 KDM2AQ9Y2K7 1162 aa20.88■□□□□ 0.93
CAPN1-216ENST00000528739 TMEM132EQ6IEE7 984 aa20.87■□□□□ 0.93
CAPN1-216ENST00000528739 PPLO60437 1756 aa20.87■□□□□ 0.93
CAPN1-216ENST00000528739 PHF23Q9BUL5 403 aaPredicted RBP20.86■□□□□ 0.93
CAPN1-216ENST00000528739 DCAF11Q8TEB1 546 aa20.84■□□□□ 0.93
CAPN1-216ENST00000528739 ROBO1Q9Y6N7 1651 aa20.83■□□□□ 0.93
CAPN1-216ENST00000528739 XRN1Q8IZH2 1706 aaKnown RBP20.83■□□□□ 0.92
CAPN1-216ENST00000528739 ROBO2Q9HCK4 1378 aa20.83■□□□□ 0.92
CAPN1-216ENST00000528739 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.81■□□□□ 0.92
CAPN1-216ENST00000528739 CFAP70Q5T0N1 1121 aa20.81■□□□□ 0.92
CAPN1-216ENST00000528739 WAPLQ7Z5K2 1190 aa20.79■□□□□ 0.92
CAPN1-216ENST00000528739 C14orf93Q9H972 538 aaKnown RBP20.79■□□□□ 0.92
CAPN1-216ENST00000528739 ADGRL3Q9HAR2 1447 aa20.78■□□□□ 0.92
CAPN1-216ENST00000528739 BRINP3Q76B58 766 aa20.78■□□□□ 0.92
CAPN1-216ENST00000528739 PIK3C2GO75747 1445 aa20.78■□□□□ 0.92
CAPN1-216ENST00000528739 DCCP43146 1447 aa20.78■□□□□ 0.92
CAPN1-216ENST00000528739 PTCH1Q13635 1447 aa20.78■□□□□ 0.92
CAPN1-216ENST00000528739 LRPPRCP42704 1394 aaKnown RBP20.76■□□□□ 0.91
CAPN1-216ENST00000528739 DHX57Q6P158 1386 aaKnown RBP20.76■□□□□ 0.91
CAPN1-216ENST00000528739 ILDR2Q71H61 639 aa20.76■□□□□ 0.91
CAPN1-216ENST00000528739 MED1Q15648 1581 aaPredicted RBP20.75■□□□□ 0.91
CAPN1-216ENST00000528739 SETD1AO15047 1707 aaKnown RBP20.74■□□□□ 0.91
CAPN1-216ENST00000528739 IFT172Q9UG01 1749 aa20.73■□□□□ 0.91
CAPN1-216ENST00000528739 MST1RQ04912 1400 aa20.73■□□□□ 0.91
CAPN1-216ENST00000528739 NUTM2FA1L443 756 aa20.73■□□□□ 0.91
CAPN1-216ENST00000528739 SAFB2Q14151 953 aaKnown RBP eCLIP20.73■□□□□ 0.91
CAPN1-216ENST00000528739 MYOM2P54296 1465 aa20.73■□□□□ 0.91
CAPN1-216ENST00000528739 PHLPP1O60346 1717 aa20.73■□□□□ 0.91
CAPN1-216ENST00000528739 ABCC11Q96J66 1382 aa20.72■□□□□ 0.91
CAPN1-216ENST00000528739 YTHDC2Q9H6S0 1430 aaKnown RBP20.72■□□□□ 0.91
CAPN1-216ENST00000528739 POGKQ9P215 609 aa20.72■□□□□ 0.91
CAPN1-216ENST00000528739 JCADQ9P266 1359 aa20.72■□□□□ 0.91
CAPN1-216ENST00000528739 TRIM26Q12899 539 aaPredicted RBP20.71■□□□□ 0.91
CAPN1-216ENST00000528739 DDX17Q92841 729 aaKnown RBP20.71■□□□□ 0.91
CAPN1-216ENST00000528739 STAC3Q96MF2 364 aa20.71■□□□□ 0.91
CAPN1-216ENST00000528739 ESCO1Q5FWF5 840 aa20.7■□□□□ 0.9
CAPN1-216ENST00000528739 ORAI2Q96SN7 254 aa20.7■□□□□ 0.9
CAPN1-216ENST00000528739 TRAK1Q9UPV9 953 aa20.7■□□□□ 0.9
CAPN1-216ENST00000528739 NEUROD1Q13562 356 aa20.69■□□□□ 0.9
CAPN1-216ENST00000528739 MEX3CQ5U5Q3 659 aaKnown RBP20.69■□□□□ 0.9
CAPN1-216ENST00000528739 NALCNQ8IZF0 1738 aa20.69■□□□□ 0.9
CAPN1-216ENST00000528739 PLEKHH1Q9ULM0 1364 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 121.3 ms