RNA–Protein interactions for RNA: ENST00000528498.5

RDX-204, Transcript of radixin, humanhuman

TSL 1 (best) BASIC

Gene RDX, Length 2,511 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-204ENST00000528498 MLECQ14165 292 aa30.02■■■□□ 2.4
RDX-204ENST00000528498 IQGAP1P46940 1657 aa30.02■■■□□ 2.4
RDX-204ENST00000528498 ARHGAP31Q2M1Z3 1444 aa30.01■■■□□ 2.39
RDX-204ENST00000528498 FBXO31Q5XUX0 539 aaPredicted RBP30■■■□□ 2.39
RDX-204ENST00000528498 NUTM2DQ5VT03 806 aaPredicted RBP30■■■□□ 2.39
RDX-204ENST00000528498 IDI1Q13907 227 aa29.98■■■□□ 2.39
RDX-204ENST00000528498 PIK3C2BO00750 1634 aa29.98■■■□□ 2.39
RDX-204ENST00000528498 REREQ9P2R6 1566 aa29.96■■■□□ 2.39
RDX-204ENST00000528498 PPLO60437 1756 aa29.96■■■□□ 2.39
RDX-204ENST00000528498 SCAF11Q99590 1463 aaKnown RBP29.95■■■□□ 2.39
RDX-204ENST00000528498 NRXN1Q9ULB1 1477 aa29.94■■■□□ 2.38
RDX-204ENST00000528498 KIAA1210Q9ULL0 1709 aa29.94■■■□□ 2.38
RDX-204ENST00000528498 PREX1Q8TCU6 1659 aa29.94■■■□□ 2.38
RDX-204ENST00000528498 AGLP35573 1532 aa29.94■■■□□ 2.38
RDX-204ENST00000528498 ARHGEF40Q8TER5 1519 aa29.93■■■□□ 2.38
RDX-204ENST00000528498 SENP3Q9H4L4 574 aaPredicted RBP29.91■■■□□ 2.38
RDX-204ENST00000528498 TMF1P82094 1093 aa29.9■■■□□ 2.38
RDX-204ENST00000528498 CLTCQ00610 1675 aaKnown RBP29.9■■■□□ 2.38
RDX-204ENST00000528498 MYO5BQ9ULV0 1848 aa29.88■■■□□ 2.37
RDX-204ENST00000528498 MRS2Q9HD23 443 aa29.88■■■□□ 2.37
RDX-204ENST00000528498 PIK3C2GO75747 1445 aa29.87■■■□□ 2.37
RDX-204ENST00000528498 NEXMIFQ5QGS0 1516 aa29.84■■■□□ 2.37
RDX-204ENST00000528498 TMEM132EQ6IEE7 984 aa29.84■■■□□ 2.37
RDX-204ENST00000528498 SLC52A1Q9NWF4 448 aa29.84■■■□□ 2.37
RDX-204ENST00000528498 ERVK-7P63135 1459 aa29.83■■■□□ 2.37
RDX-204ENST00000528498 RPGRIP1LQ68CZ1 1315 aa29.83■■■□□ 2.37
RDX-204ENST00000528498 FAM9BQ8IZU0 186 aa29.82■■■□□ 2.36
RDX-204ENST00000528498 C14orf93Q9H972 538 aaKnown RBP29.82■■■□□ 2.36
RDX-204ENST00000528498 PER1O15534 1290 aaPredicted RBP29.8■■■□□ 2.36
RDX-204ENST00000528498 PANK3Q9H999 370 aa29.8■■■□□ 2.36
RDX-204ENST00000528498 TMEM131LA2VDJ0 1609 aa29.79■■■□□ 2.36
RDX-204ENST00000528498 EIF3AQ14152 1382 aaKnown RBP29.78■■■□□ 2.36
RDX-204ENST00000528498 HNRNPUQ00839 825 aaKnown RBP eCLIP29.78■■■□□ 2.36
RDX-204ENST00000528498 TRAK1Q9UPV9 953 aa29.78■■■□□ 2.36
RDX-204ENST00000528498 PPP6R1Q9UPN7 881 aa29.77■■■□□ 2.36
RDX-204ENST00000528498 ADGRB1O14514 1584 aa29.76■■■□□ 2.35
RDX-204ENST00000528498 TRHP20396 242 aaPredicted RBP29.76■■■□□ 2.35
RDX-204ENST00000528498 VGFO15240 615 aaPredicted RBP29.75■■■□□ 2.35
RDX-204ENST00000528498 SETBP1Q9Y6X0 1596 aa29.74■■■□□ 2.35
RDX-204ENST00000528498 CC2D1BQ5T0F9 858 aaKnown RBP29.69■■■□□ 2.34
RDX-204ENST00000528498 STAG3Q9UJ98 1225 aa29.69■■■□□ 2.34
RDX-204ENST00000528498 ZMYM3Q14202 1370 aa29.68■■■□□ 2.34
RDX-204ENST00000528498 SPATA31D1Q6ZQQ2 1576 aa29.68■■■□□ 2.34
RDX-204ENST00000528498 ESF1Q9H501 851 aaKnown RBP29.67■■■□□ 2.34
RDX-204ENST00000528498 CENPJQ9HC77 1338 aaPredicted RBP29.66■■■□□ 2.34
RDX-204ENST00000528498 MYOM1P52179 1685 aa29.65■■■□□ 2.34
RDX-204ENST00000528498 MYO3AQ8NEV4 1616 aa29.65■■■□□ 2.34
RDX-204ENST00000528498 KTN1Q86UP2 1357 aaKnown RBP29.64■■■□□ 2.34
RDX-204ENST00000528498 RALBP1Q15311 655 aa29.63■■■□□ 2.33
RDX-204ENST00000528498 PARD3Q8TEW0 1356 aa29.63■■■□□ 2.33
RDX-204ENST00000528498 CDCA8Q53HL2 280 aa29.63■■■□□ 2.33
RDX-204ENST00000528498 ZFYVE9O95405 1425 aa29.62■■■□□ 2.33
RDX-204ENST00000528498 MYBBP1AQ9BQG0 1328 aaKnown RBP29.62■■■□□ 2.33
RDX-204ENST00000528498 KDM5AP29375 1690 aaKnown RBP29.62■■■□□ 2.33
RDX-204ENST00000528498 ASXL1Q8IXJ9 1541 aa29.61■■■□□ 2.33
RDX-204ENST00000528498 A2ML1A8K2U0 1454 aa29.6■■■□□ 2.33
RDX-204ENST00000528498 TMC1Q8TDI8 760 aa29.6■■■□□ 2.33
RDX-204ENST00000528498 QRICH2Q9H0J4 1663 aa29.6■■■□□ 2.33
RDX-204ENST00000528498 SENP3-EIF4A1A0A087X0R7 540 aa29.59■■■□□ 2.33
RDX-204ENST00000528498 STK26Q9P289 416 aa29.59■■■□□ 2.33
RDX-204ENST00000528498 PNISRQ8TF01 805 aaKnown RBP29.57■■■□□ 2.32
RDX-204ENST00000528498 SAFB2Q14151 953 aaKnown RBP eCLIP29.56■■■□□ 2.32
RDX-204ENST00000528498 SUPT16HQ9Y5B9 1047 aaKnown RBP29.56■■■□□ 2.32
RDX-204ENST00000528498 SBNO2Q9Y2G9 1366 aa29.56■■■□□ 2.32
RDX-204ENST00000528498 ARHGEF28Q8N1W1 1705 aaKnown RBP29.55■■■□□ 2.32
RDX-204ENST00000528498 KNSTRNQ9Y448 316 aa29.53■■■□□ 2.32
RDX-204ENST00000528498 CEBPAP49715 358 aaPredicted RBP29.52■■■□□ 2.32
RDX-204ENST00000528498 BRD4O60885 1362 aaPredicted RBP29.52■■■□□ 2.32
RDX-204ENST00000528498 AMER1Q5JTC6 1135 aaPredicted RBP29.51■■■□□ 2.32
RDX-204ENST00000528498 RIMS2Q9UQ26 1411 aa29.5■■■□□ 2.31
RDX-204ENST00000528498 PLPPR3Q6T4P5 718 aa29.49■■■□□ 2.31
RDX-204ENST00000528498 NLRP13Q86W25 1043 aa29.49■■■□□ 2.31
RDX-204ENST00000528498 ALKQ9UM73 1620 aa29.49■■■□□ 2.31
RDX-204ENST00000528498 CARD14Q9BXL6 1004 aa29.47■■■□□ 2.31
RDX-204ENST00000528498 TNRQ92752 1358 aa29.47■■■□□ 2.31
RDX-204ENST00000528498 SLC24A1O60721 1099 aa29.47■■■□□ 2.31
RDX-204ENST00000528498 SLC12A5Q9H2X9 1139 aa29.44■■■□□ 2.3
RDX-204ENST00000528498 YTHDC2Q9H6S0 1430 aaKnown RBP29.44■■■□□ 2.3
RDX-204ENST00000528498 TULP4Q9NRJ4 1543 aa29.44■■■□□ 2.3
RDX-204ENST00000528498 PTPRMP28827 1452 aa29.43■■■□□ 2.3
RDX-204ENST00000528498 ZBED9Q6R2W3 1325 aa29.43■■■□□ 2.3
RDX-204ENST00000528498 LRPPRCP42704 1394 aaKnown RBP29.41■■■□□ 2.3
RDX-204ENST00000528498 PRAM1Q96QH2 718 aa29.41■■■□□ 2.3
RDX-204ENST00000528498 CABP2Q9NPB3 220 aa29.4■■■□□ 2.3
RDX-204ENST00000528498 MINK1Q8N4C8 1332 aaPredicted RBP29.38■■■□□ 2.29
RDX-204ENST00000528498 PPP2R1AP30153 589 aa29.36■■■□□ 2.29
RDX-204ENST00000528498 EVC2Q86UK5 1308 aa29.36■■■□□ 2.29
RDX-204ENST00000528498 SETD1AO15047 1707 aaKnown RBP29.36■■■□□ 2.29
RDX-204ENST00000528498 NRXN3Q9Y4C0 1643 aa29.36■■■□□ 2.29
RDX-204ENST00000528498 UBR1Q8IWV7 1749 aa29.35■■■□□ 2.29
RDX-204ENST00000528498 POGKQ9P215 609 aa29.35■■■□□ 2.29
RDX-204ENST00000528498 DNAJC5Q9H3Z4 198 aa29.34■■■□□ 2.29
RDX-204ENST00000528498 C3P01024 1663 aa29.34■■■□□ 2.29
RDX-204ENST00000528498 FER1L4A9Z1Z3 1794 aa29.32■■■□□ 2.28
RDX-204ENST00000528498 WAPLQ7Z5K2 1190 aa29.32■■■□□ 2.28
RDX-204ENST00000528498 FKBP8Q14318 412 aa29.31■■■□□ 2.28
RDX-204ENST00000528498 METP08581 1390 aa29.31■■■□□ 2.28
RDX-204ENST00000528498 NSD3Q9BZ95 1437 aa29.3■■■□□ 2.28
RDX-204ENST00000528498 TMEM2Q9UHN6 1383 aa29.3■■■□□ 2.28
RDX-204ENST00000528498 NPC1L1Q9UHC9 1359 aa29.29■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms