RNA–Protein interactions for RNA: ENST00000527792.5

LTBP3-209, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2

Gene LTBP3, Length 923 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-209ENST00000527792 PIK3C2BO00750 1634 aa22.2■■□□□ 1.15
LTBP3-209ENST00000527792 KIF1BO60333 1816 aa22.2■■□□□ 1.14
LTBP3-209ENST00000527792 RGL3Q3MIN7 710 aa22.2■■□□□ 1.14
LTBP3-209ENST00000527792 TONSLQ96HA7 1378 aa22.2■■□□□ 1.14
LTBP3-209ENST00000527792 ZNF326Q5BKZ1 582 aaKnown RBP22.18■■□□□ 1.14
LTBP3-209ENST00000527792 NLRP1Q9C000 1473 aa22.17■■□□□ 1.14
LTBP3-209ENST00000527792 CPS1P31327 1500 aa22.16■■□□□ 1.14
LTBP3-209ENST00000527792 NEURL4Q96JN8 1562 aa22.16■■□□□ 1.14
LTBP3-209ENST00000527792 NPHP4O75161 1426 aaPredicted RBP22.14■■□□□ 1.14
LTBP3-209ENST00000527792 ADGRB3O60242 1522 aa22.12■■□□□ 1.13
LTBP3-209ENST00000527792 SPATA31E1Q6ZUB1 1445 aa22.12■■□□□ 1.13
LTBP3-209ENST00000527792 TMEM131LA2VDJ0 1609 aa22.11■■□□□ 1.13
LTBP3-209ENST00000527792 ZEB1P37275 1124 aaPredicted RBP22.11■■□□□ 1.13
LTBP3-209ENST00000527792 L3MBTL2Q969R5 705 aa22.11■■□□□ 1.13
LTBP3-209ENST00000527792 MED14O60244 1454 aa22.1■■□□□ 1.13
LTBP3-209ENST00000527792 TIMELESSQ9UNS1 1208 aa22.1■■□□□ 1.13
LTBP3-209ENST00000527792 KDM2AQ9Y2K7 1162 aa22.1■■□□□ 1.13
LTBP3-209ENST00000527792 POLR1AO95602 1720 aaPredicted RBP22.09■■□□□ 1.13
LTBP3-209ENST00000527792 DCAF11Q8TEB1 546 aa22.09■■□□□ 1.13
LTBP3-209ENST00000527792 MYO5BQ9ULV0 1848 aa22.08■■□□□ 1.13
LTBP3-209ENST00000527792 UBR1Q8IWV7 1749 aa22.08■■□□□ 1.12
LTBP3-209ENST00000527792 SENP3Q9H4L4 574 aaPredicted RBP22.07■■□□□ 1.12
LTBP3-209ENST00000527792 NUTM2DQ5VT03 806 aaPredicted RBP22.05■■□□□ 1.12
LTBP3-209ENST00000527792 RPGRIP1LQ68CZ1 1315 aa22.05■■□□□ 1.12
LTBP3-209ENST00000527792 KDM5AP29375 1690 aaKnown RBP22.04■■□□□ 1.12
LTBP3-209ENST00000527792 HDGFP51858 240 aaKnown RBP22.02■■□□□ 1.12
LTBP3-209ENST00000527792 TXNDC2Q86VQ3 553 aa22.02■■□□□ 1.12
LTBP3-209ENST00000527792 PHF23Q9BUL5 403 aaPredicted RBP22.02■■□□□ 1.12
LTBP3-209ENST00000527792 MED1Q15648 1581 aaPredicted RBP22.01■■□□□ 1.11
LTBP3-209ENST00000527792 RIMS2Q9UQ26 1411 aa22.01■■□□□ 1.11
LTBP3-209ENST00000527792 PPP1R15AO75807 674 aaPredicted RBP22.01■■□□□ 1.11
LTBP3-209ENST00000527792 LTKP29376 864 aa22.01■■□□□ 1.11
LTBP3-209ENST00000527792 NEXMIFQ5QGS0 1516 aa22■■□□□ 1.11
LTBP3-209ENST00000527792 TMEM2Q9UHN6 1383 aa21.99■■□□□ 1.11
LTBP3-209ENST00000527792 VGFO15240 615 aaPredicted RBP21.99■■□□□ 1.11
LTBP3-209ENST00000527792 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.99■■□□□ 1.11
LTBP3-209ENST00000527792 EID1Q9Y6B2 187 aa21.99■■□□□ 1.11
LTBP3-209ENST00000527792 LRRC7Q96NW7 1537 aa21.99■■□□□ 1.11
LTBP3-209ENST00000527792 PPLO60437 1756 aa21.99■■□□□ 1.11
LTBP3-209ENST00000527792 ALKQ9UM73 1620 aa21.98■■□□□ 1.11
LTBP3-209ENST00000527792 IFT172Q9UG01 1749 aa21.97■■□□□ 1.11
LTBP3-209ENST00000527792 STAC3Q96MF2 364 aa21.97■■□□□ 1.11
LTBP3-209ENST00000527792 IQGAP1P46940 1657 aa21.97■■□□□ 1.11
LTBP3-209ENST00000527792 BCANQ96GW7 911 aa21.96■■□□□ 1.11
LTBP3-209ENST00000527792 ADGRF5Q8IZF2 1346 aa21.95■■□□□ 1.1
LTBP3-209ENST00000527792 ZFYVE9O95405 1425 aa21.94■■□□□ 1.1
LTBP3-209ENST00000527792 MYOM2P54296 1465 aa21.94■■□□□ 1.1
LTBP3-209ENST00000527792 SCAF11Q99590 1463 aaKnown RBP21.94■■□□□ 1.1
LTBP3-209ENST00000527792 SLIT1O75093 1534 aa21.94■■□□□ 1.1
LTBP3-209ENST00000527792 ARHGAP23Q9P227 1491 aa21.93■■□□□ 1.1
LTBP3-209ENST00000527792 STRCP1A6NGW2 1772 aa21.92■■□□□ 1.1
LTBP3-209ENST00000527792 NBPF8Q3BBV2 869 aa21.91■■□□□ 1.1
LTBP3-209ENST00000527792 PRAG1Q86YV5 1406 aa21.9■■□□□ 1.1
LTBP3-209ENST00000527792 NRXN1Q9ULB1 1477 aa21.85■■□□□ 1.09
LTBP3-209ENST00000527792 CFAP70Q5T0N1 1121 aa21.85■■□□□ 1.09
LTBP3-209ENST00000527792 PIK3C2GO75747 1445 aa21.85■■□□□ 1.09
LTBP3-209ENST00000527792 PLEKHG1Q9ULL1 1385 aa21.85■■□□□ 1.09
LTBP3-209ENST00000527792 RGS17Q9UGC6 210 aaPredicted RBP21.83■■□□□ 1.09
LTBP3-209ENST00000527792 KCNA6P17658 529 aa21.82■■□□□ 1.08
LTBP3-209ENST00000527792 SLC26A8Q96RN1 970 aa21.82■■□□□ 1.08
LTBP3-209ENST00000527792 C14orf93Q9H972 538 aaKnown RBP21.82■■□□□ 1.08
LTBP3-209ENST00000527792 PROSER2Q86WR7 435 aaPredicted RBP21.81■■□□□ 1.08
LTBP3-209ENST00000527792 RBM33Q96EV2 1170 aaKnown RBP21.81■■□□□ 1.08
LTBP3-209ENST00000527792 ROCK2O75116 1388 aaKnown RBP21.81■■□□□ 1.08
LTBP3-209ENST00000527792 TRPM1Q7Z4N2 1603 aa21.8■■□□□ 1.08
LTBP3-209ENST00000527792 NBPF1Q3BBV0 1214 aa21.8■■□□□ 1.08
LTBP3-209ENST00000527792 TMEM94Q12767 1356 aa21.79■■□□□ 1.08
LTBP3-209ENST00000527792 SETBP1Q9Y6X0 1596 aa21.78■■□□□ 1.08
LTBP3-209ENST00000527792 RALGAPBQ86X10 1494 aa21.78■■□□□ 1.08
LTBP3-209ENST00000527792 LAMC1P11047 1609 aa21.78■■□□□ 1.08
LTBP3-209ENST00000527792 FAM135BQ49AJ0 1406 aa21.78■■□□□ 1.08
LTBP3-209ENST00000527792 KIAA1210Q9ULL0 1709 aa21.77■■□□□ 1.08
LTBP3-209ENST00000527792 CARD11Q9BXL7 1154 aa21.77■■□□□ 1.08
LTBP3-209ENST00000527792 NRXN3Q9Y4C0 1643 aa21.77■■□□□ 1.07
LTBP3-209ENST00000527792 TMEM132EQ6IEE7 984 aa21.76■■□□□ 1.07
LTBP3-209ENST00000527792 ADAMTS13Q76LX8 1427 aa21.74■■□□□ 1.07
LTBP3-209ENST00000527792 TBX22Q9Y458 520 aa21.73■■□□□ 1.07
LTBP3-209ENST00000527792 STK26Q9P289 416 aa21.72■■□□□ 1.07
LTBP3-209ENST00000527792 DIP2AQ14689 1571 aa21.71■■□□□ 1.07
LTBP3-209ENST00000527792 XIRP1Q702N8 1843 aaKnown RBP21.7■■□□□ 1.06
LTBP3-209ENST00000527792 METP08581 1390 aa21.7■■□□□ 1.06
LTBP3-209ENST00000527792 SETD1AO15047 1707 aaKnown RBP21.69■■□□□ 1.06
LTBP3-209ENST00000527792 POTEAQ6S8J7 498 aa21.69■■□□□ 1.06
LTBP3-209ENST00000527792 TRAK1Q9UPV9 953 aa21.68■■□□□ 1.06
LTBP3-209ENST00000527792 GPRASP1Q5JY77 1395 aa21.68■■□□□ 1.06
LTBP3-209ENST00000527792 ASXL1Q8IXJ9 1541 aa21.68■■□□□ 1.06
LTBP3-209ENST00000527792 ADGRB1O14514 1584 aa21.68■■□□□ 1.06
LTBP3-209ENST00000527792 SLAIN2Q9P270 581 aa21.67■■□□□ 1.06
LTBP3-209ENST00000527792 YTHDC2Q9H6S0 1430 aaKnown RBP21.66■■□□□ 1.06
LTBP3-209ENST00000527792 EIF4G2P78344 907 aaKnown RBP eCLIP21.65■■□□□ 1.06
LTBP3-209ENST00000527792 LRPPRCP42704 1394 aaKnown RBP21.64■■□□□ 1.06
LTBP3-209ENST00000527792 USP47Q96K76 1375 aa21.64■■□□□ 1.06
LTBP3-209ENST00000527792 MSH6P52701 1360 aa21.63■■□□□ 1.05
LTBP3-209ENST00000527792 AMOTL2Q9Y2J4 779 aa21.63■■□□□ 1.05
LTBP3-209ENST00000527792 PIK3R4Q99570 1358 aa21.62■■□□□ 1.05
LTBP3-209ENST00000527792 HSPA5P11021 654 aaKnown RBP21.62■■□□□ 1.05
LTBP3-209ENST00000527792 EIF3AQ14152 1382 aaKnown RBP21.61■■□□□ 1.05
LTBP3-209ENST00000527792 HIRIP3Q9BW71 556 aaPredicted RBP21.61■■□□□ 1.05
LTBP3-209ENST00000527792 PTPRUQ92729 1446 aa21.61■■□□□ 1.05
LTBP3-209ENST00000527792 POGKQ9P215 609 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms