RNA–Protein interactions for RNA: ENST00000527792.5

LTBP3-209, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2

Gene LTBP3, Length 923 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-209ENST00000527792 NISCHQ9Y2I1 1504 aa35.97■■■■□ 3.35
LTBP3-209ENST00000527792 ABCC9O60706 1549 aa31.92■■■□□ 2.7
LTBP3-209ENST00000527792 CCDC180Q9P1Z9 1646 aa31.69■■■□□ 2.66
LTBP3-209ENST00000527792 DNAJC5BQ9UF47 199 aa30.3■■■□□ 2.44
LTBP3-209ENST00000527792 RB1CC1Q8TDY2 1594 aa30.16■■■□□ 2.42
LTBP3-209ENST00000527792 ZCCHC6Q5VYS8 1495 aaKnown RBP30.07■■■□□ 2.4
LTBP3-209ENST00000527792 DCAF8L2P0C7V8 631 aa30.04■■■□□ 2.4
LTBP3-209ENST00000527792 NACADO15069 1562 aa29.9■■■□□ 2.38
LTBP3-209ENST00000527792 PABPN1Q86U42 306 aaKnown RBP eCLIP29.8■■■□□ 2.36
LTBP3-209ENST00000527792 DCAF1Q9Y4B6 1507 aa29.72■■■□□ 2.35
LTBP3-209ENST00000527792 MYO15BQ96JP2 1530 aa29.61■■■□□ 2.33
LTBP3-209ENST00000527792 UNC13AQ9UPW8 1703 aa29.36■■■□□ 2.29
LTBP3-209ENST00000527792 BICRAQ9NZM4 1560 aa29.3■■■□□ 2.28
LTBP3-209ENST00000527792 SCRIBQ14160 1630 aa29.07■■■□□ 2.24
LTBP3-209ENST00000527792 SHROOM4Q9ULL8 1493 aa28.95■■■□□ 2.22
LTBP3-209ENST00000527792 CECR2Q9BXF3 1484 aa28.76■■■□□ 2.19
LTBP3-209ENST00000527792 CC2D2AQ9P2K1 1620 aa28.73■■■□□ 2.19
LTBP3-209ENST00000527792 EIF4G1Q04637 1599 aaKnown RBP28.6■■■□□ 2.17
LTBP3-209ENST00000527792 DNAJC5Q9H3Z4 198 aa27.99■■■□□ 2.07
LTBP3-209ENST00000527792 BAZ1AQ9NRL2 1556 aaPredicted RBP27.86■■■□□ 2.05
LTBP3-209ENST00000527792 SMARCA4P51532 1647 aa27.8■■■□□ 2.04
LTBP3-209ENST00000527792 MROH2BQ7Z745 1585 aa27.76■■■□□ 2.03
LTBP3-209ENST00000527792 NCAPD3P42695 1498 aa27.69■■■□□ 2.02
LTBP3-209ENST00000527792 RSF1Q96T23 1441 aaPredicted RBP27.65■■■□□ 2.02
LTBP3-209ENST00000527792 SUPT5HO00267 1087 aaKnown RBP27.56■■■□□ 2
LTBP3-209ENST00000527792 ERCC6Q03468 1493 aa27.56■■■□□ 2
LTBP3-209ENST00000527792 ATAD2BQ9ULI0 1458 aa27.56■■■□□ 2
LTBP3-209ENST00000527792 CUX2O14529 1486 aa27.55■■■□□ 2
LTBP3-209ENST00000527792 WIZO95785 1651 aa27.52■■■□□ 2
LTBP3-209ENST00000527792 SMARCA2P51531 1590 aa27.49■■□□□ 1.99
LTBP3-209ENST00000527792 PEG3Q9GZU2 1588 aa27.43■■□□□ 1.98
LTBP3-209ENST00000527792 HMGXB3Q12766 1538 aa27.35■■□□□ 1.97
LTBP3-209ENST00000527792 BAZ1BQ9UIG0 1483 aaKnown RBP27.34■■□□□ 1.97
LTBP3-209ENST00000527792 NESP48681 1621 aa27.34■■□□□ 1.97
LTBP3-209ENST00000527792 TOP2AP11388 1531 aaKnown RBP27.22■■□□□ 1.95
LTBP3-209ENST00000527792 LAMC3Q9Y6N6 1575 aa27.01■■□□□ 1.92
LTBP3-209ENST00000527792 PDS5BQ9NTI5 1447 aa26.97■■□□□ 1.91
LTBP3-209ENST00000527792 THOC2Q8NI27 1593 aaKnown RBP26.97■■□□□ 1.91
LTBP3-209ENST00000527792 CCDC88BA6NC98 1476 aa26.93■■□□□ 1.9
LTBP3-209ENST00000527792 CADPSQ9ULU8 1353 aa26.87■■□□□ 1.89
LTBP3-209ENST00000527792 KIF21AQ7Z4S6 1674 aa26.82■■□□□ 1.88
LTBP3-209ENST00000527792 MRC2Q9UBG0 1479 aa26.7■■□□□ 1.87
LTBP3-209ENST00000527792 TRIM41Q8WV44 630 aa26.68■■□□□ 1.86
LTBP3-209ENST00000527792 WDR62O43379 1518 aa26.59■■□□□ 1.85
LTBP3-209ENST00000527792 CFTRP13569 1480 aa26.56■■□□□ 1.84
LTBP3-209ENST00000527792 CEP164Q9UPV0 1460 aa26.54■■□□□ 1.84
LTBP3-209ENST00000527792 FANCD2Q9BXW9 1451 aa26.52■■□□□ 1.84
LTBP3-209ENST00000527792 PRDM2Q13029 1718 aa26.42■■□□□ 1.82
LTBP3-209ENST00000527792 OSCARQ8IYS5 282 aa26.42■■□□□ 1.82
LTBP3-209ENST00000527792 URB2Q14146 1524 aaKnown RBP26.29■■□□□ 1.8
LTBP3-209ENST00000527792 ABCC8Q09428 1581 aa26.16■■□□□ 1.78
LTBP3-209ENST00000527792 WRNQ14191 1432 aaPredicted RBP eCLIP26.08■■□□□ 1.77
LTBP3-209ENST00000527792 ZNF608Q9ULD9 1512 aaPredicted RBP26.04■■□□□ 1.76
LTBP3-209ENST00000527792 IFT140Q96RY7 1462 aa26.04■■□□□ 1.76
LTBP3-209ENST00000527792 CUX1P39880 1505 aa26■■□□□ 1.75
LTBP3-209ENST00000527792 DNMBPQ6XZF7 1577 aa25.99■■□□□ 1.75
LTBP3-209ENST00000527792 TOPBP1Q92547 1522 aa25.98■■□□□ 1.75
LTBP3-209ENST00000527792 CHIC1Q5VXU3 224 aa25.98■■□□□ 1.75
LTBP3-209ENST00000527792 SYNJ1O43426 1573 aa25.97■■□□□ 1.75
LTBP3-209ENST00000527792 TOP2BQ02880 1626 aa25.92■■□□□ 1.74
LTBP3-209ENST00000527792 BIVM-ERCC5R4GMW8 1640 aa25.92■■□□□ 1.74
LTBP3-209ENST00000527792 RIMBP3CA6NJZ7 1639 aa25.9■■□□□ 1.74
LTBP3-209ENST00000527792 RIMBP3BA6NNM3 1639 aa25.9■■□□□ 1.74
LTBP3-209ENST00000527792 RIMBP3Q9UFD9 1639 aa25.9■■□□□ 1.74
LTBP3-209ENST00000527792 CYB5RLQ6IPT4 315 aa25.85■■□□□ 1.73
LTBP3-209ENST00000527792 FGD5Q6ZNL6 1462 aa25.85■■□□□ 1.73
LTBP3-209ENST00000527792 ARHGEF11O15085 1522 aa25.83■■□□□ 1.73
LTBP3-209ENST00000527792 AQRO60306 1485 aaKnown RBP eCLIP25.83■■□□□ 1.73
LTBP3-209ENST00000527792 FBLN2P98095 1184 aa25.81■■□□□ 1.72
LTBP3-209ENST00000527792 POLA1P09884 1462 aaPredicted RBP25.79■■□□□ 1.72
LTBP3-209ENST00000527792 EIF4G3O43432 1585 aaKnown RBP25.77■■□□□ 1.72
LTBP3-209ENST00000527792 SOGA1O94964 1423 aa25.74■■□□□ 1.71
LTBP3-209ENST00000527792 RAD54L2Q9Y4B4 1467 aa25.72■■□□□ 1.71
LTBP3-209ENST00000527792 TARBP1Q13395 1621 aaKnown RBP25.7■■□□□ 1.7
LTBP3-209ENST00000527792 TDRD9Q8NDG6 1382 aaKnown RBP25.67■■□□□ 1.7
LTBP3-209ENST00000527792 TRHP20396 242 aaPredicted RBP25.64■■□□□ 1.7
LTBP3-209ENST00000527792 CHD1O14646 1710 aa25.6■■□□□ 1.69
LTBP3-209ENST00000527792 ARAP1Q96P48 1450 aa25.58■■□□□ 1.69
LTBP3-209ENST00000527792 ABCA10Q8WWZ4 1543 aa25.58■■□□□ 1.68
LTBP3-209ENST00000527792 WDR97A6NE52 1622 aa25.55■■□□□ 1.68
LTBP3-209ENST00000527792 CHMP7Q8WUX9 453 aaPredicted RBP25.54■■□□□ 1.68
LTBP3-209ENST00000527792 KIF27Q86VH2 1401 aa25.5■■□□□ 1.67
LTBP3-209ENST00000527792 FAM9AQ8IZU1 332 aaPredicted RBP25.49■■□□□ 1.67
LTBP3-209ENST00000527792 SNAPC4Q5SXM2 1469 aa25.48■■□□□ 1.67
LTBP3-209ENST00000527792 RUSC2Q8N2Y8 1516 aa25.47■■□□□ 1.67
LTBP3-209ENST00000527792 GAPVD1Q14C86 1478 aa25.44■■□□□ 1.66
LTBP3-209ENST00000527792 ABCA5Q8WWZ7 1642 aa25.42■■□□□ 1.66
LTBP3-209ENST00000527792 GRIN2BQ13224 1484 aa25.4■■□□□ 1.66
LTBP3-209ENST00000527792 EEA1Q15075 1411 aa25.38■■□□□ 1.65
LTBP3-209ENST00000527792 MAGI1Q96QZ7 1491 aaPredicted RBP25.38■■□□□ 1.65
LTBP3-209ENST00000527792 CLASP1Q7Z460 1538 aa25.36■■□□□ 1.65
LTBP3-209ENST00000527792 PBRM1Q86U86 1689 aa25.35■■□□□ 1.65
LTBP3-209ENST00000527792 CSRNP3Q8WYN3 585 aa25.32■■□□□ 1.64
LTBP3-209ENST00000527792 SYNJ2O15056 1496 aa25.32■■□□□ 1.64
LTBP3-209ENST00000527792 IGF1RP08069 1367 aa25.29■■□□□ 1.64
LTBP3-209ENST00000527792 ERICH3Q5RHP9 1530 aa25.28■■□□□ 1.64
LTBP3-209ENST00000527792 AEBP2Q6ZN18 517 aaPredicted RBP25.25■■□□□ 1.63
LTBP3-209ENST00000527792 CUL7Q14999 1698 aa25.2■■□□□ 1.62
LTBP3-209ENST00000527792 CARMIL1Q5VZK9 1371 aa25.19■■□□□ 1.62
LTBP3-209ENST00000527792 EHMT2Q96KQ7 1210 aa25.18■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms