RNA–Protein interactions for RNA: ENST00000526653.1

SF3B2-205, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 329 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-205ENST00000526653 GAPVD1Q14C86 1478 aa10.1□□□□□ -0.79
SF3B2-205ENST00000526653 KCNV2Q8TDN2 545 aa10.1□□□□□ -0.79
SF3B2-205ENST00000526653 WBP1LQ9NX94 342 aa10.1□□□□□ -0.79
SF3B2-205ENST00000526653 SMAPO00193 183 aa10.09□□□□□ -0.79
SF3B2-205ENST00000526653 ARHGEF1Q92888 912 aaKnown RBP10.09□□□□□ -0.79
SF3B2-205ENST00000526653 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.09□□□□□ -0.79
SF3B2-205ENST00000526653 CCDC88BA6NC98 1476 aa10.09□□□□□ -0.79
SF3B2-205ENST00000526653 C3orf80F5H4A9 247 aa10.08□□□□□ -0.8
SF3B2-205ENST00000526653 LRCH3Q96II8 777 aa10.08□□□□□ -0.8
SF3B2-205ENST00000526653 SNAPC4Q5SXM2 1469 aa10.07□□□□□ -0.8
SF3B2-205ENST00000526653 FAM69CQ0P6D2 419 aa10.06□□□□□ -0.8
SF3B2-205ENST00000526653 NYAP1Q6ZVC0 841 aa10.06□□□□□ -0.8
SF3B2-205ENST00000526653 TSR3Q9UJK0 312 aaKnown RBP10.06□□□□□ -0.8
SF3B2-205ENST00000526653 HPS5Q9UPZ3 1129 aa10.06□□□□□ -0.8
SF3B2-205ENST00000526653 TOP2AP11388 1531 aaKnown RBP10.06□□□□□ -0.8
SF3B2-205ENST00000526653 TARBP1Q13395 1621 aaKnown RBP10.05□□□□□ -0.8
SF3B2-205ENST00000526653 NBPF26B4DH59 902 aa10.05□□□□□ -0.8
SF3B2-205ENST00000526653 MLLT3P42568 568 aaPredicted RBP10.05□□□□□ -0.8
SF3B2-205ENST00000526653 TATDN2Q93075 761 aa10.05□□□□□ -0.8
SF3B2-205ENST00000526653 NPDC1Q9NQX5 325 aaPredicted RBP10.05□□□□□ -0.8
SF3B2-205ENST00000526653 PNMA3Q9UL41 463 aa10.05□□□□□ -0.8
SF3B2-205ENST00000526653 CLASP1Q7Z460 1538 aa10.05□□□□□ -0.8
SF3B2-205ENST00000526653 POLA1P09884 1462 aaPredicted RBP10.04□□□□□ -0.8
SF3B2-205ENST00000526653 A0A0G2JS52 829 aa10.04□□□□□ -0.8
SF3B2-205ENST00000526653 ITGBL1O95965 494 aaPredicted RBP10.04□□□□□ -0.8
SF3B2-205ENST00000526653 RBM27Q9P2N5 1060 aaKnown RBP10.04□□□□□ -0.8
SF3B2-205ENST00000526653 DNMBPQ6XZF7 1577 aa10.03□□□□□ -0.8
SF3B2-205ENST00000526653 SAMD7Q7Z3H4 446 aa10.03□□□□□ -0.8
SF3B2-205ENST00000526653 NUDT18Q6ZVK8 323 aa10.02□□□□□ -0.81
SF3B2-205ENST00000526653 SYNJ1O43426 1573 aa10.01□□□□□ -0.81
SF3B2-205ENST00000526653 PADI6Q6TGC4 694 aa10.01□□□□□ -0.81
SF3B2-205ENST00000526653 TTC13Q8NBP0 860 aa10.01□□□□□ -0.81
SF3B2-205ENST00000526653 PPP4CP60510 307 aa10□□□□□ -0.81
SF3B2-205ENST00000526653 PLCB2Q00722 1185 aa10□□□□□ -0.81
SF3B2-205ENST00000526653 SYNJ2O15056 1496 aa9.98□□□□□ -0.81
SF3B2-205ENST00000526653 GRIN2BQ13224 1484 aa9.98□□□□□ -0.81
SF3B2-205ENST00000526653 RGS20O76081 388 aa9.98□□□□□ -0.81
SF3B2-205ENST00000526653 P3H3Q8IVL6 736 aa9.98□□□□□ -0.81
SF3B2-205ENST00000526653 MAGI1Q96QZ7 1491 aaPredicted RBP9.98□□□□□ -0.81
SF3B2-205ENST00000526653 KCNC4Q03721 635 aa9.97□□□□□ -0.81
SF3B2-205ENST00000526653 ERCC6L2Q5T890 1561 aa9.96□□□□□ -0.82
SF3B2-205ENST00000526653 HDGFP51858 240 aaKnown RBP9.94□□□□□ -0.82
SF3B2-205ENST00000526653 SEMA3EO15041 775 aa9.93□□□□□ -0.82
SF3B2-205ENST00000526653 RNF40O75150 1001 aa9.93□□□□□ -0.82
SF3B2-205ENST00000526653 PTGDRQ13258 359 aa9.93□□□□□ -0.82
SF3B2-205ENST00000526653 FGD5Q6ZNL6 1462 aa9.92□□□□□ -0.82
SF3B2-205ENST00000526653 EYA1Q99502 592 aa9.92□□□□□ -0.82
SF3B2-205ENST00000526653 SWT1Q5T5J6 900 aaKnown RBP9.91□□□□□ -0.82
SF3B2-205ENST00000526653 NUTM2FA1L443 756 aa9.9□□□□□ -0.82
SF3B2-205ENST00000526653 TJAP1Q5JTD0 557 aa9.9□□□□□ -0.82
SF3B2-205ENST00000526653 PRDM2Q13029 1718 aa9.9□□□□□ -0.83
SF3B2-205ENST00000526653 FBXO41Q8TF61 875 aa9.89□□□□□ -0.83
SF3B2-205ENST00000526653 APLP1P51693 650 aa9.88□□□□□ -0.83
SF3B2-205ENST00000526653 MTRQ99707 1265 aa9.88□□□□□ -0.83
SF3B2-205ENST00000526653 ABCC10Q5T3U5 1492 aa9.87□□□□□ -0.83
SF3B2-205ENST00000526653 SLF2Q8IX21 1173 aa9.87□□□□□ -0.83
SF3B2-205ENST00000526653 PRG4Q92954 1404 aaPredicted RBP9.86□□□□□ -0.83
SF3B2-205ENST00000526653 ADGRG1Q9Y653 693 aa9.86□□□□□ -0.83
SF3B2-205ENST00000526653 IL21Q9HBE4 155 aa9.85□□□□□ -0.83
SF3B2-205ENST00000526653 CEP170Q5SW79 1584 aa9.84□□□□□ -0.83
SF3B2-205ENST00000526653 FCHSD2O94868 740 aa9.84□□□□□ -0.83
SF3B2-205ENST00000526653 HAP1P54257 671 aaPredicted RBP9.84□□□□□ -0.83
SF3B2-205ENST00000526653 FAM161AQ3B820 660 aa9.84□□□□□ -0.83
SF3B2-205ENST00000526653 RBM46Q8TBY0 533 aaKnown RBP9.84□□□□□ -0.83
SF3B2-205ENST00000526653 NECTIN2Q92692 538 aa9.84□□□□□ -0.83
SF3B2-205ENST00000526653 IRX2Q9BZI1 471 aaPredicted RBP9.84□□□□□ -0.83
SF3B2-205ENST00000526653 TTBK1Q5TCY1 1321 aaPredicted RBP9.83□□□□□ -0.84
SF3B2-205ENST00000526653 TESPA1A2RU30 521 aaPredicted RBP9.83□□□□□ -0.84
SF3B2-205ENST00000526653 DNAJB2P25686 324 aa9.83□□□□□ -0.84
SF3B2-205ENST00000526653 ZNF516Q92618 1163 aa9.83□□□□□ -0.84
SF3B2-205ENST00000526653 KIF13AQ9H1H9 1805 aa9.83□□□□□ -0.84
SF3B2-205ENST00000526653 GRIN2AQ12879 1464 aa9.83□□□□□ -0.84
SF3B2-205ENST00000526653 CUX1P39880 1505 aa9.82□□□□□ -0.84
SF3B2-205ENST00000526653 SLC4A3P48751 1232 aa9.82□□□□□ -0.84
SF3B2-205ENST00000526653 TMEM134Q9H6X4 195 aa9.81□□□□□ -0.84
SF3B2-205ENST00000526653 WDR97A6NE52 1622 aa9.81□□□□□ -0.84
SF3B2-205ENST00000526653 NUP160Q12769 1436 aa9.81□□□□□ -0.84
SF3B2-205ENST00000526653 RCCD1A6NED2 376 aa9.8□□□□□ -0.84
SF3B2-205ENST00000526653 RBM26Q5T8P6 1007 aaKnown RBP9.8□□□□□ -0.84
SF3B2-205ENST00000526653 KDM6BO15054 1643 aa9.8□□□□□ -0.84
SF3B2-205ENST00000526653 ADGRL1O94910 1474 aa9.79□□□□□ -0.84
SF3B2-205ENST00000526653 COPS2P61201 443 aa9.79□□□□□ -0.84
SF3B2-205ENST00000526653 KDM2AQ9Y2K7 1162 aa9.79□□□□□ -0.84
SF3B2-205ENST00000526653 HIC1Q14526 733 aa9.77□□□□□ -0.85
SF3B2-205ENST00000526653 SMYD5Q6GMV2 418 aa9.77□□□□□ -0.85
SF3B2-205ENST00000526653 PPP1R18Q6NYC8 613 aa9.77□□□□□ -0.85
SF3B2-205ENST00000526653 NKX2-3Q8TAU0 364 aa9.77□□□□□ -0.85
SF3B2-205ENST00000526653 HECW2Q9P2P5 1572 aa9.76□□□□□ -0.85
SF3B2-205ENST00000526653 ABCA10Q8WWZ4 1543 aa9.76□□□□□ -0.85
SF3B2-205ENST00000526653 FHAD1B1AJZ9 1412 aa9.75□□□□□ -0.85
SF3B2-205ENST00000526653 PRR14Q9BWN1 585 aa9.75□□□□□ -0.85
SF3B2-205ENST00000526653 PCDHB3Q9Y5E6 796 aa9.75□□□□□ -0.85
SF3B2-205ENST00000526653 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.74□□□□□ -0.85
SF3B2-205ENST00000526653 OATP04181 439 aa9.74□□□□□ -0.85
SF3B2-205ENST00000526653 PXYLP1Q8TE99 480 aa9.74□□□□□ -0.85
SF3B2-205ENST00000526653 GPR37O15354 613 aa9.73□□□□□ -0.85
SF3B2-205ENST00000526653 ZPR1O75312 459 aa9.73□□□□□ -0.85
SF3B2-205ENST00000526653 FECHP22830 423 aa9.73□□□□□ -0.85
SF3B2-205ENST00000526653 ILDR2Q71H61 639 aa9.73□□□□□ -0.85
SF3B2-205ENST00000526653 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms