RNA–Protein interactions for RNA: ENST00000526480.1

CSTF3-207, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 3

Gene CSTF3, Length 479 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-207ENST00000526480 PTPRKQ15262 1439 aa10.82□□□□□ -0.68
CSTF3-207ENST00000526480 KDM5CP41229 1560 aa10.82□□□□□ -0.68
CSTF3-207ENST00000526480 AGLP35573 1532 aa10.81□□□□□ -0.68
CSTF3-207ENST00000526480 ATMINO43313 823 aaPredicted RBP10.81□□□□□ -0.68
CSTF3-207ENST00000526480 ASTLQ6HA08 431 aaPredicted RBP10.81□□□□□ -0.68
CSTF3-207ENST00000526480 RYDENQ9NUL5 291 aaKnown RBP10.81□□□□□ -0.68
CSTF3-207ENST00000526480 CLTCQ00610 1675 aaKnown RBP10.8□□□□□ -0.68
CSTF3-207ENST00000526480 TTLL13PA6NNM8 815 aa10.8□□□□□ -0.68
CSTF3-207ENST00000526480 SCUBE2Q9NQ36 999 aa10.8□□□□□ -0.68
CSTF3-207ENST00000526480 MYO5CQ9NQX4 1742 aa10.8□□□□□ -0.68
CSTF3-207ENST00000526480 NUP153P49790 1475 aaKnown RBP10.8□□□□□ -0.68
CSTF3-207ENST00000526480 NPATQ14207 1427 aa10.79□□□□□ -0.68
CSTF3-207ENST00000526480 ATN1P54259 1190 aaPredicted RBP10.79□□□□□ -0.68
CSTF3-207ENST00000526480 DNMT1P26358 1616 aaKnown RBP10.78□□□□□ -0.68
CSTF3-207ENST00000526480 C7P10643 843 aa10.77□□□□□ -0.69
CSTF3-207ENST00000526480 GOLGA2Q08379 1002 aa10.77□□□□□ -0.69
CSTF3-207ENST00000526480 SLC39A7Q92504 469 aa10.77□□□□□ -0.69
CSTF3-207ENST00000526480 LRRC7Q96NW7 1537 aa10.76□□□□□ -0.69
CSTF3-207ENST00000526480 TRIM35Q9UPQ4 493 aa10.76□□□□□ -0.69
CSTF3-207ENST00000526480 SYNMO15061 1565 aa10.75□□□□□ -0.69
CSTF3-207ENST00000526480 SAMD9Q5K651 1589 aa10.75□□□□□ -0.69
CSTF3-207ENST00000526480 BCANQ96GW7 911 aa10.75□□□□□ -0.69
CSTF3-207ENST00000526480 KIDINS220Q9ULH0 1771 aa10.74□□□□□ -0.69
CSTF3-207ENST00000526480 CNTLNQ9NXG0 1405 aa10.74□□□□□ -0.69
CSTF3-207ENST00000526480 MMRN1Q13201 1228 aa10.73□□□□□ -0.69
CSTF3-207ENST00000526480 P3H3Q8IVL6 736 aa10.73□□□□□ -0.69
CSTF3-207ENST00000526480 ZNF518AQ6AHZ1 1483 aa10.73□□□□□ -0.69
CSTF3-207ENST00000526480 SETBP1Q9Y6X0 1596 aa10.73□□□□□ -0.69
CSTF3-207ENST00000526480 ITSN2Q9NZM3 1697 aa10.72□□□□□ -0.69
CSTF3-207ENST00000526480 PLCH2O75038 1416 aa10.7□□□□□ -0.7
CSTF3-207ENST00000526480 MKRN3Q13064 507 aaKnown RBP10.7□□□□□ -0.7
CSTF3-207ENST00000526480 CABP2Q9NPB3 220 aa10.7□□□□□ -0.7
CSTF3-207ENST00000526480 IQGAP1P46940 1657 aa10.69□□□□□ -0.7
CSTF3-207ENST00000526480 MFRPQ9BY79 579 aa10.69□□□□□ -0.7
CSTF3-207ENST00000526480 ROBO1Q9Y6N7 1651 aa10.69□□□□□ -0.7
CSTF3-207ENST00000526480 ZMYM3Q14202 1370 aa10.68□□□□□ -0.7
CSTF3-207ENST00000526480 EP400Q96L91 3159 aa10.68□□□□□ -0.7
CSTF3-207ENST00000526480 ESF1Q9H501 851 aaKnown RBP10.68□□□□□ -0.7
CSTF3-207ENST00000526480 A2ML1A8K2U0 1454 aa10.68□□□□□ -0.7
CSTF3-207ENST00000526480 CDC42BPBQ9Y5S2 1711 aa10.67□□□□□ -0.7
CSTF3-207ENST00000526480 KIF14Q15058 1648 aa10.67□□□□□ -0.7
CSTF3-207ENST00000526480 AFAP1Q8N556 730 aa10.67□□□□□ -0.7
CSTF3-207ENST00000526480 TRIM52Q96A61 297 aa10.67□□□□□ -0.7
CSTF3-207ENST00000526480 SEC24BO95487 1268 aa10.66□□□□□ -0.7
CSTF3-207ENST00000526480 EFCAB3Q8N7B9 438 aa10.66□□□□□ -0.7
CSTF3-207ENST00000526480 ZC3H13Q5T200 1668 aaKnown RBP10.66□□□□□ -0.7
CSTF3-207ENST00000526480 DEPDC5O75140 1603 aa10.66□□□□□ -0.7
CSTF3-207ENST00000526480 CDK13Q14004 1512 aaKnown RBP10.65□□□□□ -0.7
CSTF3-207ENST00000526480 IER5LQ5T953 404 aa10.65□□□□□ -0.7
CSTF3-207ENST00000526480 SPNS2Q8IVW8 549 aa10.65□□□□□ -0.7
CSTF3-207ENST00000526480 MLH3Q9UHC1 1453 aa10.65□□□□□ -0.7
CSTF3-207ENST00000526480 PHLPP1O60346 1717 aa10.64□□□□□ -0.71
CSTF3-207ENST00000526480 SUPT5HO00267 1087 aaKnown RBP10.64□□□□□ -0.71
CSTF3-207ENST00000526480 LRP6O75581 1613 aa10.63□□□□□ -0.71
CSTF3-207ENST00000526480 SOX12O15370 315 aa10.63□□□□□ -0.71
CSTF3-207ENST00000526480 PLEKHD1A6NEE1 506 aa10.62□□□□□ -0.71
CSTF3-207ENST00000526480 NLRP6P59044 892 aa10.62□□□□□ -0.71
CSTF3-207ENST00000526480 FBXO22Q8NEZ5 403 aa10.62□□□□□ -0.71
CSTF3-207ENST00000526480 ARHGAP5Q13017 1502 aa10.61□□□□□ -0.71
CSTF3-207ENST00000526480 MED14O60244 1454 aa10.61□□□□□ -0.71
CSTF3-207ENST00000526480 NPHP4O75161 1426 aaPredicted RBP10.6□□□□□ -0.71
CSTF3-207ENST00000526480 ABCC1P33527 1531 aa10.6□□□□□ -0.71
CSTF3-207ENST00000526480 PLCG2P16885 1265 aa10.6□□□□□ -0.71
CSTF3-207ENST00000526480 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.6□□□□□ -0.712e-12■■□□□ 14.3
CSTF3-207ENST00000526480 MYT1LQ9UL68 1186 aa10.6□□□□□ -0.71
CSTF3-207ENST00000526480 PHF8Q9UPP1 1060 aa10.6□□□□□ -0.71
CSTF3-207ENST00000526480 OCEL1Q9H607 264 aa10.59□□□□□ -0.71
CSTF3-207ENST00000526480 PLXNC1O60486 1568 aa10.59□□□□□ -0.71
CSTF3-207ENST00000526480 FAM135BQ49AJ0 1406 aa10.58□□□□□ -0.72
CSTF3-207ENST00000526480 LRP5O75197 1615 aa10.58□□□□□ -0.72
CSTF3-207ENST00000526480 COL16A1Q07092 1604 aaPredicted RBP10.58□□□□□ -0.72
CSTF3-207ENST00000526480 IRX5P78411 483 aaPredicted RBP10.57□□□□□ -0.72
CSTF3-207ENST00000526480 EFCAB2Q5VUJ9 269 aa10.57□□□□□ -0.72
CSTF3-207ENST00000526480 CADPS2Q86UW7 1296 aa10.57□□□□□ -0.72
CSTF3-207ENST00000526480 COLQQ9Y215 455 aaPredicted RBP10.57□□□□□ -0.72
CSTF3-207ENST00000526480 CDK12Q9NYV4 1490 aaPredicted RBP10.56□□□□□ -0.72
CSTF3-207ENST00000526480 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.56□□□□□ -0.72
CSTF3-207ENST00000526480 PREX2Q70Z35 1606 aa10.56□□□□□ -0.72
CSTF3-207ENST00000526480 PPP1R37O75864 691 aa10.56□□□□□ -0.72
CSTF3-207ENST00000526480 PRXQ9BXM0 1461 aa10.55□□□□□ -0.72
CSTF3-207ENST00000526480 SAMD9LQ8IVG5 1584 aa10.55□□□□□ -0.72
CSTF3-207ENST00000526480 LRRIQ1Q96JM4 1722 aa10.55□□□□□ -0.72
CSTF3-207ENST00000526480 RGS12O14924 1447 aa10.54□□□□□ -0.72
CSTF3-207ENST00000526480 IFFO2Q5TF58 517 aa10.54□□□□□ -0.72
CSTF3-207ENST00000526480 SHPRHQ149N8 1683 aa10.53□□□□□ -0.72
CSTF3-207ENST00000526480 POTEFA5A3E0 1075 aa10.53□□□□□ -0.72
CSTF3-207ENST00000526480 FAM9AQ8IZU1 332 aaPredicted RBP10.53□□□□□ -0.72
CSTF3-207ENST00000526480 CDC42BPAQ5VT25 1732 aa10.53□□□□□ -0.72
CSTF3-207ENST00000526480 NBR1Q14596 966 aa10.52□□□□□ -0.73
CSTF3-207ENST00000526480 MS4A4AQ96JQ5 239 aa10.52□□□□□ -0.73
CSTF3-207ENST00000526480 ST18O60284 1047 aa10.51□□□□□ -0.73
CSTF3-207ENST00000526480 RBM33Q96EV2 1170 aaKnown RBP10.51□□□□□ -0.73
CSTF3-207ENST00000526480 MAP3K1Q13233 1512 aa10.51□□□□□ -0.73
CSTF3-207ENST00000526480 UGGT1Q9NYU2 1555 aa10.51□□□□□ -0.73
CSTF3-207ENST00000526480 INO80Q9ULG1 1556 aaPredicted RBP10.51□□□□□ -0.73
CSTF3-207ENST00000526480 ANKLE2Q86XL3 938 aa10.5□□□□□ -0.73
CSTF3-207ENST00000526480 TNRQ92752 1358 aa10.5□□□□□ -0.73
CSTF3-207ENST00000526480 JCADQ9P266 1359 aa10.5□□□□□ -0.73
CSTF3-207ENST00000526480 RXRBP28702 533 aa10.48□□□□□ -0.73
CSTF3-207ENST00000526480 ZNF772Q68DY9 489 aaPredicted RBP10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms