RNA–Protein interactions for RNA: ENST00000526033.5

PICALM-204, Transcript of phosphatidylinositol binding clathrin assembly protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PICALM, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PICALM-204ENST00000526033 PDZRN3Q9UPQ7 1066 aa20.36■□□□□ 0.85
PICALM-204ENST00000526033 SMC4Q9NTJ3 1288 aa20.35■□□□□ 0.85
PICALM-204ENST00000526033 C22orf23Q9BZE7 217 aa20.34■□□□□ 0.85
PICALM-204ENST00000526033 CHMP5Q9NZZ3 219 aa20.33■□□□□ 0.85
PICALM-204ENST00000526033 CGNL1Q0VF96 1302 aa20.33■□□□□ 0.84
PICALM-204ENST00000526033 GBP4Q96PP9 640 aa20.33■□□□□ 0.84
PICALM-204ENST00000526033 E9PSI1 815 aa20.32■□□□□ 0.84
PICALM-204ENST00000526033 XRCC6P12956 609 aaKnown RBP eCLIP20.32■□□□□ 0.84
PICALM-204ENST00000526033 MCM4P33991 863 aa20.32■□□□□ 0.84
PICALM-204ENST00000526033 DUSP27Q5VZP5 1158 aa20.32■□□□□ 0.84
PICALM-204ENST00000526033 DDX49Q9Y6V7 483 aaKnown RBP20.32■□□□□ 0.84
PICALM-204ENST00000526033 TBC1D2Q9BYX2 928 aa20.31■□□□□ 0.84
PICALM-204ENST00000526033 MPNDQ8N594 471 aa20.31■□□□□ 0.84
PICALM-204ENST00000526033 RAPGEF6Q8TEU7 1601 aa20.31■□□□□ 0.84
PICALM-204ENST00000526033 LNPKQ9C0E8 428 aa20.31■□□□□ 0.84
PICALM-204ENST00000526033 ELL2O00472 640 aaPredicted RBP20.3■□□□□ 0.84
PICALM-204ENST00000526033 CFAP53Q96M91 514 aa20.3■□□□□ 0.84
PICALM-204ENST00000526033 NOL8Q76FK4 1167 aaKnown RBP20.29■□□□□ 0.84
PICALM-204ENST00000526033 KDM6BO15054 1643 aa20.29■□□□□ 0.84
PICALM-204ENST00000526033 RPRD2Q5VT52 1461 aaKnown RBP20.29■□□□□ 0.84
PICALM-204ENST00000526033 ESPNB1AK53 854 aa20.28■□□□□ 0.84
PICALM-204ENST00000526033 ARHGEF11O15085 1522 aa20.27■□□□□ 0.84
PICALM-204ENST00000526033 CCDC144AA2RUR9 1427 aa20.27■□□□□ 0.84
PICALM-204ENST00000526033 TNNQ9UQP3 1299 aa20.27■□□□□ 0.84
PICALM-204ENST00000526033 MRE11P49959 708 aa20.27■□□□□ 0.83
PICALM-204ENST00000526033 R3HCC1Q9Y3T6 440 aaKnown RBP20.27■□□□□ 0.83
PICALM-204ENST00000526033 PTPRGP23470 1445 aa20.26■□□□□ 0.83
PICALM-204ENST00000526033 NUP160Q12769 1436 aa20.26■□□□□ 0.83
PICALM-204ENST00000526033 GRPEL1Q9HAV7 217 aa20.26■□□□□ 0.83
PICALM-204ENST00000526033 SPINK5Q9NQ38 1064 aaPredicted RBP20.26■□□□□ 0.83
PICALM-204ENST00000526033 NUTM2DQ5VT03 806 aaPredicted RBP20.25■□□□□ 0.83
PICALM-204ENST00000526033 ANKRD50Q9ULJ7 1429 aa20.25■□□□□ 0.83
PICALM-204ENST00000526033 TROQ12816 1431 aaPredicted RBP20.25■□□□□ 0.83
PICALM-204ENST00000526033 DDX11L8A8MPP1 907 aa20.24■□□□□ 0.83
PICALM-204ENST00000526033 ABCC5O15440 1437 aa20.24■□□□□ 0.83
PICALM-204ENST00000526033 DAPK1P53355 1430 aa20.24■□□□□ 0.83
PICALM-204ENST00000526033 MIA2Q96PC5 1412 aa20.24■□□□□ 0.83
PICALM-204ENST00000526033 SLFN5Q08AF3 891 aa20.24■□□□□ 0.83
PICALM-204ENST00000526033 KIAA1107Q9UPP5 1409 aa20.23■□□□□ 0.83
PICALM-204ENST00000526033 ANKRD45Q5TZF3 282 aa20.22■□□□□ 0.83
PICALM-204ENST00000526033 CALD1Q05682 793 aaKnown RBP20.21■□□□□ 0.83
PICALM-204ENST00000526033 KIAA1211Q6ZU35 1233 aa20.21■□□□□ 0.83
PICALM-204ENST00000526033 KIF14Q15058 1648 aa20.21■□□□□ 0.83
PICALM-204ENST00000526033 TSR2Q969E8 191 aaKnown RBP20.2■□□□□ 0.82
PICALM-204ENST00000526033 TCOF1Q13428 1488 aaKnown RBP20.2■□□□□ 0.82
PICALM-204ENST00000526033 TRAK1Q9UPV9 953 aa20.2■□□□□ 0.82
PICALM-204ENST00000526033 RNF214Q8ND24 703 aa20.19■□□□□ 0.82
PICALM-204ENST00000526033 TCP11L2Q8N4U5 519 aa20.18■□□□□ 0.82
PICALM-204ENST00000526033 ATP10BO94823 1461 aa20.18■□□□□ 0.82
PICALM-204ENST00000526033 BCL11BQ9C0K0 894 aaPredicted RBP20.17■□□□□ 0.82
PICALM-204ENST00000526033 NASPP49321 788 aaPredicted RBP20.17■□□□□ 0.82
PICALM-204ENST00000526033 GPATCH8Q9UKJ3 1502 aaKnown RBP20.17■□□□□ 0.82
PICALM-204ENST00000526033 PLEKHH1Q9ULM0 1364 aa20.17■□□□□ 0.82
PICALM-204ENST00000526033 ZKSCAN2Q63HK3 967 aa20.16■□□□□ 0.82
PICALM-204ENST00000526033 MCTP1Q6DN14 999 aa20.16■□□□□ 0.82
PICALM-204ENST00000526033 DZIP1LQ8IYY4 767 aaKnown RBP20.16■□□□□ 0.82
PICALM-204ENST00000526033 CAMSAP2Q08AD1 1489 aa20.15■□□□□ 0.82
PICALM-204ENST00000526033 PCDHB15Q9Y5E8 787 aa20.15■□□□□ 0.82
PICALM-204ENST00000526033 C1orf115Q9H7X2 142 aa20.15■□□□□ 0.82
PICALM-204ENST00000526033 DMRT2Q9Y5R5 561 aa20.15■□□□□ 0.82
PICALM-204ENST00000526033 STK26Q9P289 416 aa20.14■□□□□ 0.82
PICALM-204ENST00000526033 CAVIN1Q6NZI2 390 aaKnown RBP20.14■□□□□ 0.81
PICALM-204ENST00000526033 DISP3Q9P2K9 1392 aa20.14■□□□□ 0.81
PICALM-204ENST00000526033 KDM2BQ8NHM5 1336 aa20.13■□□□□ 0.81
PICALM-204ENST00000526033 RRP9O43818 475 aaKnown RBP20.13■□□□□ 0.81
PICALM-204ENST00000526033 DENND4BO75064 1496 aaPredicted RBP20.13■□□□□ 0.81
PICALM-204ENST00000526033 PRDM10Q9NQV6 1147 aa20.13■□□□□ 0.81
PICALM-204ENST00000526033 LRPPRCP42704 1394 aaKnown RBP20.12■□□□□ 0.81
PICALM-204ENST00000526033 PER1O15534 1290 aaPredicted RBP20.1■□□□□ 0.81
PICALM-204ENST00000526033 PDE3AQ14432 1141 aa20.1■□□□□ 0.81
PICALM-204ENST00000526033 SPATA31E1Q6ZUB1 1445 aa20.1■□□□□ 0.81
PICALM-204ENST00000526033 ERCC6L2Q5T890 1561 aa20.09■□□□□ 0.81
PICALM-204ENST00000526033 WWC1Q8IX03 1113 aa20.09■□□□□ 0.81
PICALM-204ENST00000526033 RLBP1P12271 317 aa20.08■□□□□ 0.81
PICALM-204ENST00000526033 TBC1D32Q96NH3 1257 aa20.08■□□□□ 0.81
PICALM-204ENST00000526033 MTHFSP49914 203 aa20.08■□□□□ 0.8
PICALM-204ENST00000526033 CLCN1P35523 988 aa20.07■□□□□ 0.8
PICALM-204ENST00000526033 SRPK2P78362 688 aaKnown RBP20.07■□□□□ 0.8
PICALM-204ENST00000526033 CHD1O14646 1710 aa20.07■□□□□ 0.8
PICALM-204ENST00000526033 EXOSC9Q06265 439 aaKnown RBP20.06■□□□□ 0.8
PICALM-204ENST00000526033 CFAP70Q5T0N1 1121 aa20.06■□□□□ 0.8
PICALM-204ENST00000526033 XPCQ01831 940 aaPredicted RBP20.06■□□□□ 0.8
PICALM-204ENST00000526033 TNPO1Q92973 898 aaKnown RBP20.06■□□□□ 0.8
PICALM-204ENST00000526033 SOX12O15370 315 aa20.04■□□□□ 0.8
PICALM-204ENST00000526033 SLC12A5Q9H2X9 1139 aa20.04■□□□□ 0.8
PICALM-204ENST00000526033 RARSP54136 660 aaKnown RBP20.03■□□□□ 0.8
PICALM-204ENST00000526033 ERBINQ96RT1 1412 aa20.03■□□□□ 0.8
PICALM-204ENST00000526033 RUNDC1Q96C34 613 aa20.03■□□□□ 0.8
PICALM-204ENST00000526033 DNMT1P26358 1616 aaKnown RBP20.03■□□□□ 0.8
PICALM-204ENST00000526033 PARD3Q8TEW0 1356 aa20.03■□□□□ 0.8
PICALM-204ENST00000526033 IPO8O15397 1037 aaKnown RBP20.02■□□□□ 0.8
PICALM-204ENST00000526033 RBM42Q9BTD8 480 aaKnown RBP20.02■□□□□ 0.8
PICALM-204ENST00000526033 TEX14Q8IWB6 1497 aa20.02■□□□□ 0.8
PICALM-204ENST00000526033 PRPF40AO75400 957 aaKnown RBP20.02■□□□□ 0.8
PICALM-204ENST00000526033 SSFA2P28290 1259 aa20.02■□□□□ 0.8
PICALM-204ENST00000526033 ROCK1Q13464 1354 aa20.02■□□□□ 0.8
PICALM-204ENST00000526033 ABCA8O94911 1581 aa20.01■□□□□ 0.79
PICALM-204ENST00000526033 SKOR2Q2VWA4 1001 aaPredicted RBP20.01■□□□□ 0.79
PICALM-204ENST00000526033 GCC2Q8IWJ2 1684 aa20■□□□□ 0.79
PICALM-204ENST00000526033 TMEM132EQ6IEE7 984 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms