RNA–Protein interactions for RNA: ENST00000525036.1

RB1-205, Transcript of RB transcriptional corepressor 1, humanhuman

TSL 3

Gene RB1, Length 1,490 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RB1-205ENST00000525036 KIF1BO60333 1816 aa22.79■■□□□ 1.24
RB1-205ENST00000525036 STRCQ7RTU9 1775 aa22.78■■□□□ 1.24
RB1-205ENST00000525036 ANKLE2Q86XL3 938 aa22.78■■□□□ 1.24
RB1-205ENST00000525036 CCER1Q8TC90 406 aaPredicted RBP22.76■■□□□ 1.23
RB1-205ENST00000525036 EID1Q9Y6B2 187 aa22.73■■□□□ 1.23
RB1-205ENST00000525036 SCAF11Q99590 1463 aaKnown RBP22.73■■□□□ 1.23
RB1-205ENST00000525036 NEXMIFQ5QGS0 1516 aa22.73■■□□□ 1.23
RB1-205ENST00000525036 NEURL4Q96JN8 1562 aa22.73■■□□□ 1.23
RB1-205ENST00000525036 RPGRIP1LQ68CZ1 1315 aa22.69■■□□□ 1.22
RB1-205ENST00000525036 PPP1R15AO75807 674 aaPredicted RBP22.69■■□□□ 1.22
RB1-205ENST00000525036 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.69■■□□□ 1.22
RB1-205ENST00000525036 NPHP4O75161 1426 aaPredicted RBP22.68■■□□□ 1.22
RB1-205ENST00000525036 ADGRF5Q8IZF2 1346 aa22.68■■□□□ 1.22
RB1-205ENST00000525036 KDM2AQ9Y2K7 1162 aa22.68■■□□□ 1.22
RB1-205ENST00000525036 MED14O60244 1454 aa22.67■■□□□ 1.22
RB1-205ENST00000525036 POLR1AO95602 1720 aaPredicted RBP22.67■■□□□ 1.22
RB1-205ENST00000525036 HDGFP51858 240 aaKnown RBP22.66■■□□□ 1.22
RB1-205ENST00000525036 DCAF11Q8TEB1 546 aa22.66■■□□□ 1.22
RB1-205ENST00000525036 L3MBTL2Q969R5 705 aa22.66■■□□□ 1.22
RB1-205ENST00000525036 PPLO60437 1756 aa22.66■■□□□ 1.22
RB1-205ENST00000525036 SLC26A8Q96RN1 970 aa22.65■■□□□ 1.22
RB1-205ENST00000525036 PLEKHG1Q9ULL1 1385 aa22.64■■□□□ 1.22
RB1-205ENST00000525036 VGFO15240 615 aaPredicted RBP22.64■■□□□ 1.21
RB1-205ENST00000525036 BCANQ96GW7 911 aa22.64■■□□□ 1.21
RB1-205ENST00000525036 IFT172Q9UG01 1749 aa22.63■■□□□ 1.21
RB1-205ENST00000525036 CLSPNQ9HAW4 1339 aa22.62■■□□□ 1.21
RB1-205ENST00000525036 IQGAP1P46940 1657 aa22.61■■□□□ 1.21
RB1-205ENST00000525036 ADAMTS13Q76LX8 1427 aa22.6■■□□□ 1.21
RB1-205ENST00000525036 DMRT2Q9Y5R5 561 aa22.6■■□□□ 1.21
RB1-205ENST00000525036 NRXN3Q9Y4C0 1643 aa22.59■■□□□ 1.21
RB1-205ENST00000525036 MYOM2P54296 1465 aa22.57■■□□□ 1.2
RB1-205ENST00000525036 NRXN1Q9ULB1 1477 aa22.56■■□□□ 1.2
RB1-205ENST00000525036 TONSLQ96HA7 1378 aa22.56■■□□□ 1.2
RB1-205ENST00000525036 SETBP1Q9Y6X0 1596 aa22.55■■□□□ 1.2
RB1-205ENST00000525036 PIK3C2GO75747 1445 aa22.55■■□□□ 1.2
RB1-205ENST00000525036 TBX22Q9Y458 520 aa22.54■■□□□ 1.2
RB1-205ENST00000525036 CFAP70Q5T0N1 1121 aa22.54■■□□□ 1.2
RB1-205ENST00000525036 ZNF335Q9H4Z2 1342 aaPredicted RBP22.53■■□□□ 1.2
RB1-205ENST00000525036 METP08581 1390 aa22.53■■□□□ 1.2
RB1-205ENST00000525036 NBPF8Q3BBV2 869 aa22.52■■□□□ 1.2
RB1-205ENST00000525036 ALKQ9UM73 1620 aa22.52■■□□□ 1.2
RB1-205ENST00000525036 C14orf93Q9H972 538 aaKnown RBP22.51■■□□□ 1.19
RB1-205ENST00000525036 TMEM132EQ6IEE7 984 aa22.5■■□□□ 1.19
RB1-205ENST00000525036 PRAG1Q86YV5 1406 aa22.49■■□□□ 1.19
RB1-205ENST00000525036 PTPRUQ92729 1446 aa22.49■■□□□ 1.19
RB1-205ENST00000525036 STAC3Q96MF2 364 aa22.48■■□□□ 1.19
RB1-205ENST00000525036 SETD1AO15047 1707 aaKnown RBP22.47■■□□□ 1.19
RB1-205ENST00000525036 NBPF1Q3BBV0 1214 aa22.46■■□□□ 1.19
RB1-205ENST00000525036 ASXL1Q8IXJ9 1541 aa22.45■■□□□ 1.18
RB1-205ENST00000525036 STRCP1A6NGW2 1772 aa22.45■■□□□ 1.18
RB1-205ENST00000525036 DIP2AQ14689 1571 aa22.44■■□□□ 1.18
RB1-205ENST00000525036 KCNA6P17658 529 aa22.43■■□□□ 1.18
RB1-205ENST00000525036 AMOTL2Q9Y2J4 779 aa22.43■■□□□ 1.18
RB1-205ENST00000525036 RBM33Q96EV2 1170 aaKnown RBP22.42■■□□□ 1.18
RB1-205ENST00000525036 STK26Q9P289 416 aa22.41■■□□□ 1.18
RB1-205ENST00000525036 TIMELESSQ9UNS1 1208 aa22.41■■□□□ 1.18
RB1-205ENST00000525036 LTBP4Q8N2S1 1624 aa22.41■■□□□ 1.18
RB1-205ENST00000525036 PIK3R4Q99570 1358 aa22.4■■□□□ 1.18
RB1-205ENST00000525036 ADGRB1O14514 1584 aa22.39■■□□□ 1.17
RB1-205ENST00000525036 CHD2O14647 1828 aaKnown RBP22.38■■□□□ 1.17
RB1-205ENST00000525036 NWD1Q149M9 1564 aa22.36■■□□□ 1.17
RB1-205ENST00000525036 YTHDC2Q9H6S0 1430 aaKnown RBP22.36■■□□□ 1.17
RB1-205ENST00000525036 LAMC1P11047 1609 aa22.35■■□□□ 1.17
RB1-205ENST00000525036 LRPPRCP42704 1394 aaKnown RBP22.35■■□□□ 1.17
RB1-205ENST00000525036 ROBO2Q9HCK4 1378 aa22.35■■□□□ 1.17
RB1-205ENST00000525036 TRPM1Q7Z4N2 1603 aa22.34■■□□□ 1.17
RB1-205ENST00000525036 PROSER2Q86WR7 435 aaPredicted RBP22.34■■□□□ 1.17
RB1-205ENST00000525036 XRN1Q8IZH2 1706 aaKnown RBP22.34■■□□□ 1.17
RB1-205ENST00000525036 TRAK1Q9UPV9 953 aa22.33■■□□□ 1.16
RB1-205ENST00000525036 LRRC7Q96NW7 1537 aa22.32■■□□□ 1.16
RB1-205ENST00000525036 WAPLQ7Z5K2 1190 aa22.32■■□□□ 1.16
RB1-205ENST00000525036 KIAA1210Q9ULL0 1709 aa22.32■■□□□ 1.16
RB1-205ENST00000525036 ABCC11Q96J66 1382 aa22.31■■□□□ 1.16
RB1-205ENST00000525036 PLEKHH1Q9ULM0 1364 aa22.31■■□□□ 1.16
RB1-205ENST00000525036 ROCK2O75116 1388 aaKnown RBP22.3■■□□□ 1.16
RB1-205ENST00000525036 TMEM94Q12767 1356 aa22.29■■□□□ 1.16
RB1-205ENST00000525036 CPS1P31327 1500 aa22.29■■□□□ 1.16
RB1-205ENST00000525036 NKTRP30414 1462 aaKnown RBP22.28■■□□□ 1.16
RB1-205ENST00000525036 RALGAPBQ86X10 1494 aa22.28■■□□□ 1.16
RB1-205ENST00000525036 CERKQ8TCT0 537 aa22.28■■□□□ 1.16
RB1-205ENST00000525036 TECPR2O15040 1411 aa22.27■■□□□ 1.16
RB1-205ENST00000525036 GPRASP1Q5JY77 1395 aa22.26■■□□□ 1.15
RB1-205ENST00000525036 PRAM1Q96QH2 718 aa22.26■■□□□ 1.15
RB1-205ENST00000525036 PTCH1Q13635 1447 aa22.25■■□□□ 1.15
RB1-205ENST00000525036 SAFB2Q14151 953 aaKnown RBP eCLIP22.25■■□□□ 1.15
RB1-205ENST00000525036 CARD11Q9BXL7 1154 aa22.25■■□□□ 1.15
RB1-205ENST00000525036 XIRP1Q702N8 1843 aaKnown RBP22.24■■□□□ 1.15
RB1-205ENST00000525036 SIRT1Q96EB6 747 aa22.22■■□□□ 1.15
RB1-205ENST00000525036 KNDC1Q76NI1 1749 aa22.22■■□□□ 1.15
RB1-205ENST00000525036 DLC1Q96QB1 1528 aa22.21■■□□□ 1.15
RB1-205ENST00000525036 POGKQ9P215 609 aa22.2■■□□□ 1.14
RB1-205ENST00000525036 FAM135BQ49AJ0 1406 aa22.2■■□□□ 1.14
RB1-205ENST00000525036 C14orf37Q86TY3 774 aa22.19■■□□□ 1.14
RB1-205ENST00000525036 ARHGEF28Q8N1W1 1705 aaKnown RBP22.18■■□□□ 1.14
RB1-205ENST00000525036 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.18■■□□□ 1.14
RB1-205ENST00000525036 HIRIP3Q9BW71 556 aaPredicted RBP22.16■■□□□ 1.14
RB1-205ENST00000525036 MINK1Q8N4C8 1332 aaPredicted RBP22.16■■□□□ 1.14
RB1-205ENST00000525036 NALCNQ8IZF0 1738 aa22.14■■□□□ 1.14
RB1-205ENST00000525036 ADGRL3Q9HAR2 1447 aa22.14■■□□□ 1.14
RB1-205ENST00000525036 NCOA3Q9Y6Q9 1424 aa22.14■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms