RNA–Protein interactions for RNA: ENST00000522165.5

COL13A1-214, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-214ENST00000522165 ADGRF5Q8IZF2 1346 aa35.46■■■■□ 3.27
COL13A1-214ENST00000522165 HNRNPUQ00839 825 aaKnown RBP eCLIP35.43■■■■□ 3.26
COL13A1-214ENST00000522165 CHGAP10645 457 aaKnown RBP35.4■■■■□ 3.26
COL13A1-214ENST00000522165 PIK3C2BO00750 1634 aa35.4■■■■□ 3.26
COL13A1-214ENST00000522165 SYNMO15061 1565 aa35.4■■■■□ 3.26
COL13A1-214ENST00000522165 CFAP70Q5T0N1 1121 aa35.39■■■■□ 3.26
COL13A1-214ENST00000522165 KTN1Q86UP2 1357 aaKnown RBP35.38■■■■□ 3.25
COL13A1-214ENST00000522165 KIF13AQ9H1H9 1805 aa35.38■■■■□ 3.25
COL13A1-214ENST00000522165 PPLO60437 1756 aa35.38■■■■□ 3.25
COL13A1-214ENST00000522165 CNGB1Q14028 1251 aaPredicted RBP35.37■■■■□ 3.25
COL13A1-214ENST00000522165 REREQ9P2R6 1566 aa35.37■■■■□ 3.25
COL13A1-214ENST00000522165 FAM9BQ8IZU0 186 aa35.36■■■■□ 3.25
COL13A1-214ENST00000522165 EIF3AQ14152 1382 aaKnown RBP35.36■■■■□ 3.25
COL13A1-214ENST00000522165 RPGRIP1LQ68CZ1 1315 aa35.35■■■■□ 3.25
COL13A1-214ENST00000522165 PER1O15534 1290 aaPredicted RBP35.32■■■■□ 3.24
COL13A1-214ENST00000522165 RALBP1Q15311 655 aa35.32■■■■□ 3.24
COL13A1-214ENST00000522165 AGLP35573 1532 aa35.3■■■■□ 3.24
COL13A1-214ENST00000522165 PIK3C2GO75747 1445 aa35.28■■■■□ 3.24
COL13A1-214ENST00000522165 SETBP1Q9Y6X0 1596 aa35.27■■■■□ 3.24
COL13A1-214ENST00000522165 MYBBP1AQ9BQG0 1328 aaKnown RBP35.25■■■■□ 3.23
COL13A1-214ENST00000522165 CDCA8Q53HL2 280 aa35.25■■■■□ 3.23
COL13A1-214ENST00000522165 PANK3Q9H999 370 aa35.25■■■■□ 3.23
COL13A1-214ENST00000522165 PREX1Q8TCU6 1659 aa35.25■■■■□ 3.23
COL13A1-214ENST00000522165 SUPT16HQ9Y5B9 1047 aaKnown RBP35.25■■■■□ 3.23
COL13A1-214ENST00000522165 SLC52A1Q9NWF4 448 aa35.23■■■■□ 3.23
COL13A1-214ENST00000522165 PARD3Q8TEW0 1356 aa35.23■■■■□ 3.23
COL13A1-214ENST00000522165 IDI1Q13907 227 aa35.21■■■■□ 3.23
COL13A1-214ENST00000522165 C14orf93Q9H972 538 aaKnown RBP35.21■■■■□ 3.23
COL13A1-214ENST00000522165 PPP6R1Q9UPN7 881 aa35.21■■■■□ 3.23
COL13A1-214ENST00000522165 NEXMIFQ5QGS0 1516 aa35.2■■■■□ 3.23
COL13A1-214ENST00000522165 BRD4O60885 1362 aaPredicted RBP35.2■■■■□ 3.23
COL13A1-214ENST00000522165 TMC1Q8TDI8 760 aa35.18■■■■□ 3.22
COL13A1-214ENST00000522165 MYO3AQ8NEV4 1616 aa35.18■■■■□ 3.22
COL13A1-214ENST00000522165 SLC24A1O60721 1099 aa35.18■■■■□ 3.22
COL13A1-214ENST00000522165 ARHGEF40Q8TER5 1519 aa35.16■■■■□ 3.22
COL13A1-214ENST00000522165 ADGRB1O14514 1584 aa35.16■■■■□ 3.22
COL13A1-214ENST00000522165 ZBED9Q6R2W3 1325 aa35.16■■■■□ 3.22
COL13A1-214ENST00000522165 PNISRQ8TF01 805 aaKnown RBP35.15■■■■□ 3.22
COL13A1-214ENST00000522165 VGFO15240 615 aaPredicted RBP35.13■■■■□ 3.22
COL13A1-214ENST00000522165 KDM5AP29375 1690 aaKnown RBP35.12■■■■□ 3.21
COL13A1-214ENST00000522165 ERVK-7P63135 1459 aa35.12■■■■□ 3.21
COL13A1-214ENST00000522165 SBNO2Q9Y2G9 1366 aa35.11■■■■□ 3.21
COL13A1-214ENST00000522165 TMEM131LA2VDJ0 1609 aa35.11■■■■□ 3.21
COL13A1-214ENST00000522165 MYOM1P52179 1685 aa35.1■■■■□ 3.21
COL13A1-214ENST00000522165 NLRP13Q86W25 1043 aa35.1■■■■□ 3.21
COL13A1-214ENST00000522165 ZFYVE9O95405 1425 aa35.09■■■■□ 3.21
COL13A1-214ENST00000522165 FBXO31Q5XUX0 539 aaPredicted RBP35.09■■■■□ 3.21
COL13A1-214ENST00000522165 CLTCQ00610 1675 aaKnown RBP35.08■■■■□ 3.21
COL13A1-214ENST00000522165 MYO5BQ9ULV0 1848 aa35.07■■■■□ 3.21
COL13A1-214ENST00000522165 CC2D1BQ5T0F9 858 aaKnown RBP35.07■■■■□ 3.2
COL13A1-214ENST00000522165 CENPJQ9HC77 1338 aaPredicted RBP35.06■■■■□ 3.2
COL13A1-214ENST00000522165 NUTM2DQ5VT03 806 aaPredicted RBP35.05■■■■□ 3.2
COL13A1-214ENST00000522165 LRPPRCP42704 1394 aaKnown RBP35.05■■■■□ 3.2
COL13A1-214ENST00000522165 TMEM132EQ6IEE7 984 aa35.03■■■■□ 3.2
COL13A1-214ENST00000522165 TRAK1Q9UPV9 953 aa35.03■■■■□ 3.2
COL13A1-214ENST00000522165 KNSTRNQ9Y448 316 aa35.01■■■■□ 3.2
COL13A1-214ENST00000522165 FKBP8Q14318 412 aa35.01■■■■□ 3.19
COL13A1-214ENST00000522165 NEFLP07196 543 aa34.99■■■■□ 3.19
COL13A1-214ENST00000522165 SPATA31D1Q6ZQQ2 1576 aa34.98■■■■□ 3.19
COL13A1-214ENST00000522165 QRICH2Q9H0J4 1663 aa34.98■■■■□ 3.19
COL13A1-214ENST00000522165 MLECQ14165 292 aa34.97■■■■□ 3.19
COL13A1-214ENST00000522165 AMER1Q5JTC6 1135 aaPredicted RBP34.96■■■■□ 3.19
COL13A1-214ENST00000522165 ASXL1Q8IXJ9 1541 aa34.94■■■■□ 3.18
COL13A1-214ENST00000522165 NPC1L1Q9UHC9 1359 aa34.92■■■■□ 3.18
COL13A1-214ENST00000522165 ARHGEF28Q8N1W1 1705 aaKnown RBP34.9■■■■□ 3.18
COL13A1-214ENST00000522165 STAG3Q9UJ98 1225 aa34.86■■■■□ 3.17
COL13A1-214ENST00000522165 A2ML1A8K2U0 1454 aa34.84■■■■□ 3.17
COL13A1-214ENST00000522165 ZMYM3Q14202 1370 aa34.82■■■■□ 3.16
COL13A1-214ENST00000522165 ESF1Q9H501 851 aaKnown RBP34.82■■■■□ 3.16
COL13A1-214ENST00000522165 PPP2R1AP30153 589 aa34.8■■■■□ 3.16
COL13A1-214ENST00000522165 SMG6Q86US8 1419 aaKnown RBP34.8■■■■□ 3.16
COL13A1-214ENST00000522165 CARD14Q9BXL6 1004 aa34.79■■■■□ 3.16
COL13A1-214ENST00000522165 INSRP06213 1382 aa34.79■■■■□ 3.16
COL13A1-214ENST00000522165 PELP1Q8IZL8 1130 aaKnown RBP34.77■■■■□ 3.16
COL13A1-214ENST00000522165 BCANQ96GW7 911 aa34.77■■■■□ 3.16
COL13A1-214ENST00000522165 PUS7Q96PZ0 661 aaKnown RBP34.77■■■■□ 3.16
COL13A1-214ENST00000522165 ALKQ9UM73 1620 aa34.77■■■■□ 3.16
COL13A1-214ENST00000522165 TULP4Q9NRJ4 1543 aa34.75■■■■□ 3.15
COL13A1-214ENST00000522165 EVC2Q86UK5 1308 aa34.74■■■■□ 3.15
COL13A1-214ENST00000522165 SENP3Q9H4L4 574 aaPredicted RBP34.74■■■■□ 3.15
COL13A1-214ENST00000522165 RIMS2Q9UQ26 1411 aa34.73■■■■□ 3.15
COL13A1-214ENST00000522165 YTHDC2Q9H6S0 1430 aaKnown RBP34.72■■■■□ 3.15
COL13A1-214ENST00000522165 STK26Q9P289 416 aa34.72■■■■□ 3.15
COL13A1-214ENST00000522165 PTPRMP28827 1452 aa34.72■■■■□ 3.15
COL13A1-214ENST00000522165 NUDCQ9Y266 331 aa34.71■■■■□ 3.15
COL13A1-214ENST00000522165 SENP3-EIF4A1A0A087X0R7 540 aa34.7■■■■□ 3.15
COL13A1-214ENST00000522165 BLMP54132 1417 aaPredicted RBP34.7■■■■□ 3.15
COL13A1-214ENST00000522165 SLC12A5Q9H2X9 1139 aa34.69■■■■□ 3.14
COL13A1-214ENST00000522165 NSD3Q9BZ95 1437 aa34.65■■■■□ 3.14
COL13A1-214ENST00000522165 TNRQ92752 1358 aa34.64■■■■□ 3.14
COL13A1-214ENST00000522165 SAFB2Q14151 953 aaKnown RBP eCLIP34.64■■■■□ 3.14
COL13A1-214ENST00000522165 PRAM1Q96QH2 718 aa34.61■■■■□ 3.13
COL13A1-214ENST00000522165 SETD1AO15047 1707 aaKnown RBP34.6■■■■□ 3.13
COL13A1-214ENST00000522165 USP32Q8NFA0 1604 aa34.6■■■■□ 3.13
COL13A1-214ENST00000522165 IRX6P78412 446 aaPredicted RBP34.59■■■■□ 3.13
COL13A1-214ENST00000522165 ABCF1Q8NE71 845 aaKnown RBP eCLIP34.59■■■■□ 3.13
COL13A1-214ENST00000522165 CABP2Q9NPB3 220 aa34.59■■■■□ 3.13
COL13A1-214ENST00000522165 ADAMTS8Q9UP79 889 aa34.59■■■■□ 3.13
COL13A1-214ENST00000522165 POGKQ9P215 609 aa34.58■■■■□ 3.13
COL13A1-214ENST00000522165 ERICH6BQ5W0A0 696 aa34.57■■■■□ 3.12
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms