RNA–Protein interactions for RNA: ENST00000521233.1

HDAC2-211, Transcript of histone deacetylase 2, humanhuman

TSL 2

Gene HDAC2, Length 733 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-211ENST00000521233 HDGFP51858 240 aaKnown RBP18.34■□□□□ 0.53
HDAC2-211ENST00000521233 NPHP4O75161 1426 aaPredicted RBP18.33■□□□□ 0.53
HDAC2-211ENST00000521233 PCGF6Q9BYE7 350 aa18.33■□□□□ 0.52
HDAC2-211ENST00000521233 IQGAP1P46940 1657 aa18.33■□□□□ 0.52
HDAC2-211ENST00000521233 NCKAP5LQ9HCH0 1330 aa18.32■□□□□ 0.52
HDAC2-211ENST00000521233 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.32■□□□□ 0.52
HDAC2-211ENST00000521233 PPP1R15AO75807 674 aaPredicted RBP18.3■□□□□ 0.52
HDAC2-211ENST00000521233 TXNDC2Q86VQ3 553 aa18.3■□□□□ 0.52
HDAC2-211ENST00000521233 ZNF326Q5BKZ1 582 aaKnown RBP18.29■□□□□ 0.52
HDAC2-211ENST00000521233 SPATA31E1Q6ZUB1 1445 aa18.29■□□□□ 0.52
HDAC2-211ENST00000521233 DHX57Q6P158 1386 aaKnown RBP18.29■□□□□ 0.52
HDAC2-211ENST00000521233 NEXMIFQ5QGS0 1516 aa18.28■□□□□ 0.52
HDAC2-211ENST00000521233 RPGRIP1LQ68CZ1 1315 aa18.28■□□□□ 0.52
HDAC2-211ENST00000521233 PLEKHG1Q9ULL1 1385 aa18.28■□□□□ 0.52
HDAC2-211ENST00000521233 LTKP29376 864 aa18.27■□□□□ 0.52
HDAC2-211ENST00000521233 PPLO60437 1756 aa18.25■□□□□ 0.51
HDAC2-211ENST00000521233 DIP2AQ14689 1571 aa18.25■□□□□ 0.51
HDAC2-211ENST00000521233 IFT172Q9UG01 1749 aa18.23■□□□□ 0.51
HDAC2-211ENST00000521233 SETBP1Q9Y6X0 1596 aa18.22■□□□□ 0.51
HDAC2-211ENST00000521233 VGFO15240 615 aaPredicted RBP18.2■□□□□ 0.5
HDAC2-211ENST00000521233 MYOM2P54296 1465 aa18.2■□□□□ 0.5
HDAC2-211ENST00000521233 MSH5O43196 834 aa18.19■□□□□ 0.5
HDAC2-211ENST00000521233 BCANQ96GW7 911 aa18.19■□□□□ 0.5
HDAC2-211ENST00000521233 RGL3Q3MIN7 710 aa18.18■□□□□ 0.5
HDAC2-211ENST00000521233 NRXN3Q9Y4C0 1643 aa18.16■□□□□ 0.5
HDAC2-211ENST00000521233 NUTM2DQ5VT03 806 aaPredicted RBP18.16■□□□□ 0.5
HDAC2-211ENST00000521233 CPS1P31327 1500 aa18.16■□□□□ 0.5
HDAC2-211ENST00000521233 ADAMTS13Q76LX8 1427 aa18.15■□□□□ 0.5
HDAC2-211ENST00000521233 STAC3Q96MF2 364 aa18.15■□□□□ 0.5
HDAC2-211ENST00000521233 PIK3R4Q99570 1358 aa18.15■□□□□ 0.5
HDAC2-211ENST00000521233 NWD1Q149M9 1564 aa18.14■□□□□ 0.49
HDAC2-211ENST00000521233 LAMC1P11047 1609 aa18.13■□□□□ 0.49
HDAC2-211ENST00000521233 LTBP4Q8N2S1 1624 aa18.13■□□□□ 0.49
HDAC2-211ENST00000521233 SLC26A8Q96RN1 970 aa18.13■□□□□ 0.49
HDAC2-211ENST00000521233 TBX22Q9Y458 520 aa18.13■□□□□ 0.49
HDAC2-211ENST00000521233 ZNF335Q9H4Z2 1342 aaPredicted RBP18.13■□□□□ 0.49
HDAC2-211ENST00000521233 CLSPNQ9HAW4 1339 aa18.13■□□□□ 0.49
HDAC2-211ENST00000521233 PIK3C2GO75747 1445 aa18.13■□□□□ 0.49
HDAC2-211ENST00000521233 NRXN1Q9ULB1 1477 aa18.13■□□□□ 0.49
HDAC2-211ENST00000521233 NKTRP30414 1462 aaKnown RBP18.12■□□□□ 0.49
HDAC2-211ENST00000521233 ALKQ9UM73 1620 aa18.1■□□□□ 0.49
HDAC2-211ENST00000521233 SETD1AO15047 1707 aaKnown RBP18.09■□□□□ 0.49
HDAC2-211ENST00000521233 IQSEC2Q5JU85 1478 aa18.09■□□□□ 0.49
HDAC2-211ENST00000521233 ADGRF5Q8IZF2 1346 aa18.09■□□□□ 0.49
HDAC2-211ENST00000521233 CHD2O14647 1828 aaKnown RBP18.08■□□□□ 0.48
HDAC2-211ENST00000521233 KCNA6P17658 529 aa18.07■□□□□ 0.48
HDAC2-211ENST00000521233 DCAF11Q8TEB1 546 aa18.07■□□□□ 0.48
HDAC2-211ENST00000521233 STRCP1A6NGW2 1772 aa18.07■□□□□ 0.48
HDAC2-211ENST00000521233 SIN3AQ96ST3 1273 aa18.06■□□□□ 0.48
HDAC2-211ENST00000521233 XRN1Q8IZH2 1706 aaKnown RBP18.06■□□□□ 0.48
HDAC2-211ENST00000521233 TONSLQ96HA7 1378 aa18.05■□□□□ 0.48
HDAC2-211ENST00000521233 NEUROD1Q13562 356 aa18.05■□□□□ 0.48
HDAC2-211ENST00000521233 PRAG1Q86YV5 1406 aa18.04■□□□□ 0.48
HDAC2-211ENST00000521233 METP08581 1390 aa18.04■□□□□ 0.48
HDAC2-211ENST00000521233 CCER1Q8TC90 406 aaPredicted RBP18.03■□□□□ 0.48
HDAC2-211ENST00000521233 LRRC7Q96NW7 1537 aa18.03■□□□□ 0.48
HDAC2-211ENST00000521233 CERKQ8TCT0 537 aa18.02■□□□□ 0.48
HDAC2-211ENST00000521233 KDM2AQ9Y2K7 1162 aa18.02■□□□□ 0.48
HDAC2-211ENST00000521233 KIAA1210Q9ULL0 1709 aa18.01■□□□□ 0.47
HDAC2-211ENST00000521233 PTCH1Q13635 1447 aa18.01■□□□□ 0.47
HDAC2-211ENST00000521233 ASXL1Q8IXJ9 1541 aa18.01■□□□□ 0.47
HDAC2-211ENST00000521233 PTPRUQ92729 1446 aa18■□□□□ 0.47
HDAC2-211ENST00000521233 L3MBTL2Q969R5 705 aa18■□□□□ 0.47
HDAC2-211ENST00000521233 C14orf93Q9H972 538 aaKnown RBP18■□□□□ 0.47
HDAC2-211ENST00000521233 KNDC1Q76NI1 1749 aa17.99■□□□□ 0.47
HDAC2-211ENST00000521233 NCOA3Q9Y6Q9 1424 aa17.98■□□□□ 0.47
HDAC2-211ENST00000521233 AMOTL2Q9Y2J4 779 aa17.98■□□□□ 0.47
HDAC2-211ENST00000521233 TECPR2O15040 1411 aa17.98■□□□□ 0.47
HDAC2-211ENST00000521233 LRPPRCP42704 1394 aaKnown RBP17.97■□□□□ 0.47
HDAC2-211ENST00000521233 ADRA2BP18089 450 aa17.97■□□□□ 0.47
HDAC2-211ENST00000521233 ADGRB1O14514 1584 aa17.96■□□□□ 0.47
HDAC2-211ENST00000521233 TMEM94Q12767 1356 aa17.96■□□□□ 0.47
HDAC2-211ENST00000521233 PROSER2Q86WR7 435 aaPredicted RBP17.96■□□□□ 0.47
HDAC2-211ENST00000521233 YTHDC2Q9H6S0 1430 aaKnown RBP17.96■□□□□ 0.47
HDAC2-211ENST00000521233 CFAP70Q5T0N1 1121 aa17.95■□□□□ 0.46
HDAC2-211ENST00000521233 TIMELESSQ9UNS1 1208 aa17.95■□□□□ 0.46
HDAC2-211ENST00000521233 ABCC11Q96J66 1382 aa17.94■□□□□ 0.46
HDAC2-211ENST00000521233 XIRP1Q702N8 1843 aaKnown RBP17.94■□□□□ 0.46
HDAC2-211ENST00000521233 DLC1Q96QB1 1528 aa17.93■□□□□ 0.46
HDAC2-211ENST00000521233 TRPM1Q7Z4N2 1603 aa17.92■□□□□ 0.46
HDAC2-211ENST00000521233 MSH6P52701 1360 aa17.91■□□□□ 0.46
HDAC2-211ENST00000521233 FAM135BQ49AJ0 1406 aa17.91■□□□□ 0.46
HDAC2-211ENST00000521233 ROBO2Q9HCK4 1378 aa17.91■□□□□ 0.46
HDAC2-211ENST00000521233 DCCP43146 1447 aa17.9■□□□□ 0.46
HDAC2-211ENST00000521233 ADGRL3Q9HAR2 1447 aa17.9■□□□□ 0.46
HDAC2-211ENST00000521233 TMEM132EQ6IEE7 984 aa17.9■□□□□ 0.46
HDAC2-211ENST00000521233 C14orf37Q86TY3 774 aa17.89■□□□□ 0.45
HDAC2-211ENST00000521233 RALGAPBQ86X10 1494 aa17.88■□□□□ 0.45
HDAC2-211ENST00000521233 STK26Q9P289 416 aa17.88■□□□□ 0.45
HDAC2-211ENST00000521233 NALCNQ8IZF0 1738 aa17.87■□□□□ 0.45
HDAC2-211ENST00000521233 SIRT1Q96EB6 747 aa17.87■□□□□ 0.45
HDAC2-211ENST00000521233 PIAS4Q8N2W9 510 aaPredicted RBP17.86■□□□□ 0.45
HDAC2-211ENST00000521233 ROCK2O75116 1388 aaKnown RBP17.86■□□□□ 0.45
HDAC2-211ENST00000521233 TOM1O60784 492 aa17.85■□□□□ 0.45
HDAC2-211ENST00000521233 CDC42BPGQ6DT37 1551 aa17.85■□□□□ 0.45
HDAC2-211ENST00000521233 ARHGEF28Q8N1W1 1705 aaKnown RBP17.85■□□□□ 0.45
HDAC2-211ENST00000521233 FBXO41Q8TF61 875 aa17.85■□□□□ 0.45
HDAC2-211ENST00000521233 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.84■□□□□ 0.45
HDAC2-211ENST00000521233 GPRASP1Q5JY77 1395 aa17.84■□□□□ 0.45
HDAC2-211ENST00000521233 UBAP1LF5GYI3 381 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms