RNA–Protein interactions for RNA: ENST00000519321.5

SKP1-206, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-206ENST00000519321 RIMS2Q9UQ26 1411 aa33.19■■■□□ 2.9
SKP1-206ENST00000519321 ZFYVE9O95405 1425 aa33.17■■■□□ 2.9
SKP1-206ENST00000519321 ZNF326Q5BKZ1 582 aaKnown RBP33.16■■■□□ 2.9
SKP1-206ENST00000519321 IQGAP1P46940 1657 aa33.14■■■□□ 2.9
SKP1-206ENST00000519321 ANKRD30BQ9BXX2 1392 aa33.14■■■□□ 2.9
SKP1-206ENST00000519321 PPP1R15AO75807 674 aaPredicted RBP33.12■■■□□ 2.89
SKP1-206ENST00000519321 PCGF6Q9BYE7 350 aa33.09■■■□□ 2.89
SKP1-206ENST00000519321 RPGRIP1LQ68CZ1 1315 aa33.08■■■□□ 2.89
SKP1-206ENST00000519321 PLEKHG1Q9ULL1 1385 aa33.06■■■□□ 2.88
SKP1-206ENST00000519321 SPATA31E1Q6ZUB1 1445 aa33.04■■■□□ 2.88
SKP1-206ENST00000519321 NEXMIFQ5QGS0 1516 aa33.03■■■□□ 2.88
SKP1-206ENST00000519321 BCANQ96GW7 911 aa33.02■■■□□ 2.88
SKP1-206ENST00000519321 NUTM2DQ5VT03 806 aaPredicted RBP33■■■□□ 2.87
SKP1-206ENST00000519321 VGFO15240 615 aaPredicted RBP32.99■■■□□ 2.87
SKP1-206ENST00000519321 DHX57Q6P158 1386 aaKnown RBP32.98■■■□□ 2.87
SKP1-206ENST00000519321 RGL3Q3MIN7 710 aa32.98■■■□□ 2.87
SKP1-206ENST00000519321 PPLO60437 1756 aa32.94■■■□□ 2.86
SKP1-206ENST00000519321 ZNF335Q9H4Z2 1342 aaPredicted RBP32.94■■■□□ 2.86
SKP1-206ENST00000519321 SLC26A8Q96RN1 970 aa32.92■■■□□ 2.86
SKP1-206ENST00000519321 DIP2AQ14689 1571 aa32.92■■■□□ 2.86
SKP1-206ENST00000519321 TBX22Q9Y458 520 aa32.91■■■□□ 2.86
SKP1-206ENST00000519321 SETBP1Q9Y6X0 1596 aa32.9■■■□□ 2.86
SKP1-206ENST00000519321 LTBP4Q8N2S1 1624 aa32.89■■■□□ 2.86
SKP1-206ENST00000519321 IFT172Q9UG01 1749 aa32.88■■■□□ 2.85
SKP1-206ENST00000519321 ADAMTS13Q76LX8 1427 aa32.87■■■□□ 2.85
SKP1-206ENST00000519321 SENP3Q9H4L4 574 aaPredicted RBP32.86■■■□□ 2.85
SKP1-206ENST00000519321 CPS1P31327 1500 aa32.86■■■□□ 2.85
SKP1-206ENST00000519321 STAC3Q96MF2 364 aa32.83■■■□□ 2.85
SKP1-206ENST00000519321 PIK3R4Q99570 1358 aa32.83■■■□□ 2.85
SKP1-206ENST00000519321 NRXN3Q9Y4C0 1643 aa32.82■■■□□ 2.84
SKP1-206ENST00000519321 CERKQ8TCT0 537 aa32.81■■■□□ 2.84
SKP1-206ENST00000519321 KCNA6P17658 529 aa32.8■■■□□ 2.84
SKP1-206ENST00000519321 MYOM2P54296 1465 aa32.8■■■□□ 2.84
SKP1-206ENST00000519321 ADGRF5Q8IZF2 1346 aa32.77■■■□□ 2.84
SKP1-206ENST00000519321 IQSEC2Q5JU85 1478 aa32.75■■■□□ 2.83
SKP1-206ENST00000519321 STRCP1A6NGW2 1772 aa32.75■■■□□ 2.83
SKP1-206ENST00000519321 NWD1Q149M9 1564 aa32.75■■■□□ 2.83
SKP1-206ENST00000519321 CHD2O14647 1828 aaKnown RBP32.74■■■□□ 2.83
SKP1-206ENST00000519321 DCAF11Q8TEB1 546 aa32.74■■■□□ 2.83
SKP1-206ENST00000519321 SIN3AQ96ST3 1273 aa32.73■■■□□ 2.83
SKP1-206ENST00000519321 PIK3C2GO75747 1445 aa32.73■■■□□ 2.83
SKP1-206ENST00000519321 NRXN1Q9ULB1 1477 aa32.73■■■□□ 2.83
SKP1-206ENST00000519321 ALKQ9UM73 1620 aa32.73■■■□□ 2.83
SKP1-206ENST00000519321 NKTRP30414 1462 aaKnown RBP32.72■■■□□ 2.83
SKP1-206ENST00000519321 NEUROD1Q13562 356 aa32.7■■■□□ 2.83
SKP1-206ENST00000519321 KDM2AQ9Y2K7 1162 aa32.68■■■□□ 2.82
SKP1-206ENST00000519321 METP08581 1390 aa32.68■■■□□ 2.82
SKP1-206ENST00000519321 SETD1AO15047 1707 aaKnown RBP32.67■■■□□ 2.82
SKP1-206ENST00000519321 LRRC7Q96NW7 1537 aa32.67■■■□□ 2.82
SKP1-206ENST00000519321 AMOTL2Q9Y2J4 779 aa32.65■■■□□ 2.82
SKP1-206ENST00000519321 CLSPNQ9HAW4 1339 aa32.65■■■□□ 2.82
SKP1-206ENST00000519321 LAMC1P11047 1609 aa32.64■■■□□ 2.82
SKP1-206ENST00000519321 PROSER2Q86WR7 435 aaPredicted RBP32.64■■■□□ 2.82
SKP1-206ENST00000519321 PTPRUQ92729 1446 aa32.63■■■□□ 2.81
SKP1-206ENST00000519321 C14orf93Q9H972 538 aaKnown RBP32.63■■■□□ 2.81
SKP1-206ENST00000519321 XRN1Q8IZH2 1706 aaKnown RBP32.6■■■□□ 2.81
SKP1-206ENST00000519321 L3MBTL2Q969R5 705 aa32.59■■■□□ 2.81
SKP1-206ENST00000519321 TMEM94Q12767 1356 aa32.57■■■□□ 2.8
SKP1-206ENST00000519321 CFAP70Q5T0N1 1121 aa32.56■■■□□ 2.8
SKP1-206ENST00000519321 NCOA3Q9Y6Q9 1424 aa32.56■■■□□ 2.8
SKP1-206ENST00000519321 TONSLQ96HA7 1378 aa32.55■■■□□ 2.8
SKP1-206ENST00000519321 PRAG1Q86YV5 1406 aa32.53■■■□□ 2.8
SKP1-206ENST00000519321 CCER1Q8TC90 406 aaPredicted RBP32.52■■■□□ 2.8
SKP1-206ENST00000519321 FBXO41Q8TF61 875 aa32.52■■■□□ 2.8
SKP1-206ENST00000519321 XIRP1Q702N8 1843 aaKnown RBP32.51■■■□□ 2.8
SKP1-206ENST00000519321 PTCH1Q13635 1447 aa32.51■■■□□ 2.79
SKP1-206ENST00000519321 LRPPRCP42704 1394 aaKnown RBP32.5■■■□□ 2.79
SKP1-206ENST00000519321 TMEM132EQ6IEE7 984 aa32.5■■■□□ 2.79
SKP1-206ENST00000519321 ASXL1Q8IXJ9 1541 aa32.5■■■□□ 2.79
SKP1-206ENST00000519321 YTHDC2Q9H6S0 1430 aaKnown RBP32.48■■■□□ 2.79
SKP1-206ENST00000519321 ABCC11Q96J66 1382 aa32.47■■■□□ 2.79
SKP1-206ENST00000519321 KIAA1210Q9ULL0 1709 aa32.46■■■□□ 2.79
SKP1-206ENST00000519321 TECPR2O15040 1411 aa32.46■■■□□ 2.79
SKP1-206ENST00000519321 TOM1O60784 492 aa32.46■■■□□ 2.79
SKP1-206ENST00000519321 MSH6P52701 1360 aa32.45■■■□□ 2.79
SKP1-206ENST00000519321 UBAP1LF5GYI3 381 aa32.45■■■□□ 2.79
SKP1-206ENST00000519321 C14orf37Q86TY3 774 aa32.45■■■□□ 2.79
SKP1-206ENST00000519321 RBM33Q96EV2 1170 aaKnown RBP32.45■■■□□ 2.79
SKP1-206ENST00000519321 KNDC1Q76NI1 1749 aa32.45■■■□□ 2.78
SKP1-206ENST00000519321 STK26Q9P289 416 aa32.44■■■□□ 2.78
SKP1-206ENST00000519321 ROBO2Q9HCK4 1378 aa32.43■■■□□ 2.78
SKP1-206ENST00000519321 ADGRB1O14514 1584 aa32.42■■■□□ 2.78
SKP1-206ENST00000519321 SIRT1Q96EB6 747 aa32.41■■■□□ 2.78
SKP1-206ENST00000519321 TIMELESSQ9UNS1 1208 aa32.41■■■□□ 2.78
SKP1-206ENST00000519321 C19orf44Q9H6X5 657 aa32.4■■■□□ 2.78
SKP1-206ENST00000519321 FAM135BQ49AJ0 1406 aa32.36■■■□□ 2.77
SKP1-206ENST00000519321 DLC1Q96QB1 1528 aa32.35■■■□□ 2.77
SKP1-206ENST00000519321 ADGRL3Q9HAR2 1447 aa32.34■■■□□ 2.77
SKP1-206ENST00000519321 DCCP43146 1447 aa32.34■■■□□ 2.77
SKP1-206ENST00000519321 CADPS2Q86UW7 1296 aa32.33■■■□□ 2.77
SKP1-206ENST00000519321 ATF3P18847 181 aa32.32■■■□□ 2.76
SKP1-206ENST00000519321 SIPA1L2Q9P2F8 1722 aaPredicted RBP32.31■■■□□ 2.76
SKP1-206ENST00000519321 TRPM1Q7Z4N2 1603 aa32.31■■■□□ 2.76
SKP1-206ENST00000519321 NBPF1Q3BBV0 1214 aa32.29■■■□□ 2.76
SKP1-206ENST00000519321 WAPLQ7Z5K2 1190 aa32.29■■■□□ 2.76
SKP1-206ENST00000519321 TRAK1Q9UPV9 953 aa32.29■■■□□ 2.76
SKP1-206ENST00000519321 NALCNQ8IZF0 1738 aa32.29■■■□□ 2.76
SKP1-206ENST00000519321 NBPF8Q3BBV2 869 aa32.27■■■□□ 2.76
SKP1-206ENST00000519321 ILDR1Q86SU0 546 aaPredicted RBP32.27■■■□□ 2.76
SKP1-206ENST00000519321 POGKQ9P215 609 aa32.27■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms