RNA–Protein interactions for RNA: ENST00000518716.1

PABPC1-207, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-207ENST00000518716 MAP3K4Q9Y6R4 1608 aa10.7□□□□□ -0.7
PABPC1-207ENST00000518716 ZDHHC16Q969W1 377 aa10.69□□□□□ -0.7
PABPC1-207ENST00000518716 CRISPLD2Q9H0B8 497 aa10.69□□□□□ -0.7
PABPC1-207ENST00000518716 BCAMP50895 628 aa10.68□□□□□ -0.7
PABPC1-207ENST00000518716 PPP1R15BQ5SWA1 713 aa10.67□□□□□ -0.7
PABPC1-207ENST00000518716 ANKK1Q8NFD2 765 aa10.67□□□□□ -0.7
PABPC1-207ENST00000518716 TEX14Q8IWB6 1497 aa10.67□□□□□ -0.7
PABPC1-207ENST00000518716 IQGAP2Q13576 1575 aa10.66□□□□□ -0.7
PABPC1-207ENST00000518716 PROX2Q3B8N5 592 aa10.66□□□□□ -0.7
PABPC1-207ENST00000518716 TTBK1Q5TCY1 1321 aaPredicted RBP10.65□□□□□ -0.7
PABPC1-207ENST00000518716 EVI5O60447 810 aa10.65□□□□□ -0.7
PABPC1-207ENST00000518716 RABGEF1Q9UJ41 708 aa10.65□□□□□ -0.7
PABPC1-207ENST00000518716 UGGT2Q9NYU1 1516 aa10.64□□□□□ -0.71
PABPC1-207ENST00000518716 PPP1R3GB7ZBB8 358 aa10.63□□□□□ -0.71
PABPC1-207ENST00000518716 HS6ST3Q8IZP7 471 aa10.63□□□□□ -0.71
PABPC1-207ENST00000518716 ZCCHC11Q5TAX3 1644 aaKnown RBP10.62□□□□□ -0.71
PABPC1-207ENST00000518716 SOWAHBA6NEL2 793 aa10.62□□□□□ -0.71
PABPC1-207ENST00000518716 MAGI3Q5TCQ9 1506 aa10.62□□□□□ -0.71
PABPC1-207ENST00000518716 WDR7Q9Y4E6 1490 aa10.61□□□□□ -0.71
PABPC1-207ENST00000518716 COL9A1P20849 921 aa10.61□□□□□ -0.71
PABPC1-207ENST00000518716 NCKAP5LQ9HCH0 1330 aa10.6□□□□□ -0.71
PABPC1-207ENST00000518716 KCNC4Q03721 635 aa10.6□□□□□ -0.71
PABPC1-207ENST00000518716 FBXO41Q8TF61 875 aa10.6□□□□□ -0.71
PABPC1-207ENST00000518716 WBP1LQ9NX94 342 aa10.6□□□□□ -0.71
PABPC1-207ENST00000518716 LAPTM4AQ15012 233 aa10.58□□□□□ -0.72
PABPC1-207ENST00000518716 TRAF7Q6Q0C0 670 aa10.58□□□□□ -0.72
PABPC1-207ENST00000518716 NYAP1Q6ZVC0 841 aa10.58□□□□□ -0.72
PABPC1-207ENST00000518716 KIAA0556O60303 1618 aa10.58□□□□□ -0.72
PABPC1-207ENST00000518716 CD109Q6YHK3 1445 aa10.58□□□□□ -0.72
PABPC1-207ENST00000518716 LAPTM4BQ86VI4 370 aa10.57□□□□□ -0.72
PABPC1-207ENST00000518716 ZFRQ96KR1 1074 aaKnown RBP10.57□□□□□ -0.72
PABPC1-207ENST00000518716 PCDHGA10Q9Y5H3 936 aa10.57□□□□□ -0.72
PABPC1-207ENST00000518716 RAPGEF2Q9Y4G8 1499 aa10.56□□□□□ -0.72
PABPC1-207ENST00000518716 NKX1-1Q15270 411 aaPredicted RBP10.56□□□□□ -0.72
PABPC1-207ENST00000518716 ARAP3Q8WWN8 1544 aa10.55□□□□□ -0.72
PABPC1-207ENST00000518716 GFRA3O60609 400 aa10.55□□□□□ -0.72
PABPC1-207ENST00000518716 CFAP43Q8NDM7 1665 aa10.54□□□□□ -0.72
PABPC1-207ENST00000518716 ABCA8O94911 1581 aa10.54□□□□□ -0.72
PABPC1-207ENST00000518716 KIAA1468Q9P260 1216 aa10.54□□□□□ -0.72
PABPC1-207ENST00000518716 SEPT9Q9UHD8 586 aaPredicted RBP10.52□□□□□ -0.73
PABPC1-207ENST00000518716 ADAMTSL3P82987 1691 aa10.51□□□□□ -0.73
PABPC1-207ENST00000518716 PTPRMP28827 1452 aa10.51□□□□□ -0.73
PABPC1-207ENST00000518716 PDE4AP27815 886 aa10.51□□□□□ -0.73
PABPC1-207ENST00000518716 KIF21BO75037 1637 aa10.51□□□□□ -0.73
PABPC1-207ENST00000518716 PHLDB1Q86UU1 1377 aa10.5□□□□□ -0.73
PABPC1-207ENST00000518716 MAP3K9P80192 1104 aa10.49□□□□□ -0.73
PABPC1-207ENST00000518716 CHGAP10645 457 aaKnown RBP10.48□□□□□ -0.73
PABPC1-207ENST00000518716 EMILIN3Q9NT22 766 aa10.48□□□□□ -0.73
PABPC1-207ENST00000518716 GOLGA3Q08378 1498 aa10.48□□□□□ -0.73
PABPC1-207ENST00000518716 TYW1BQ6NUM6 668 aa10.47□□□□□ -0.73
PABPC1-207ENST00000518716 ATP10BO94823 1461 aa10.47□□□□□ -0.73
PABPC1-207ENST00000518716 FBXW7Q969H0 707 aa10.46□□□□□ -0.73
PABPC1-207ENST00000518716 TSR3Q9UJK0 312 aaKnown RBP10.46□□□□□ -0.73
PABPC1-207ENST00000518716 HPS5Q9UPZ3 1129 aa10.46□□□□□ -0.73
PABPC1-207ENST00000518716 LMTK3Q96Q04 1460 aa10.46□□□□□ -0.74
PABPC1-207ENST00000518716 ONECUT3O60422 494 aaPredicted RBP10.45□□□□□ -0.74
PABPC1-207ENST00000518716 RAPGEF3O95398 923 aa10.45□□□□□ -0.74
PABPC1-207ENST00000518716 LARP6Q9BRS8 491 aaKnown RBP10.45□□□□□ -0.74
PABPC1-207ENST00000518716 ABCA9Q8IUA7 1624 aa10.44□□□□□ -0.74
PABPC1-207ENST00000518716 PCF11O94913 1555 aaKnown RBP10.44□□□□□ -0.74
PABPC1-207ENST00000518716 PRXQ9BXM0 1461 aa10.44□□□□□ -0.74
PABPC1-207ENST00000518716 NRG2O14511 850 aaPredicted RBP10.44□□□□□ -0.74
PABPC1-207ENST00000518716 PHF14O94880 888 aa10.44□□□□□ -0.74
PABPC1-207ENST00000518716 DDX27Q96GQ7 796 aaKnown RBP10.44□□□□□ -0.74
PABPC1-207ENST00000518716 PRKD2Q9BZL6 878 aa10.44□□□□□ -0.74
PABPC1-207ENST00000518716 NEO1Q92859 1461 aa10.43□□□□□ -0.74
PABPC1-207ENST00000518716 FAM98CQ17RN3 349 aaKnown RBP10.43□□□□□ -0.74
PABPC1-207ENST00000518716 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.43□□□□□ -0.74
PABPC1-207ENST00000518716 BCORL1Q5H9F3 1711 aa10.43□□□□□ -0.74
PABPC1-207ENST00000518716 CTTNBP2Q8WZ74 1663 aa10.42□□□□□ -0.74
PABPC1-207ENST00000518716 MFSD10Q14728 455 aa10.42□□□□□ -0.74
PABPC1-207ENST00000518716 LRCH3Q96II8 777 aa10.42□□□□□ -0.74
PABPC1-207ENST00000518716 FRMPD1Q5SYB0 1578 aa10.42□□□□□ -0.74
PABPC1-207ENST00000518716 TRIM6-TRIM34B2RNG4 842 aa10.41□□□□□ -0.74
PABPC1-207ENST00000518716 C6orf132Q5T0Z8 1188 aa10.41□□□□□ -0.74
PABPC1-207ENST00000518716 RYDENQ9NUL5 291 aaKnown RBP10.41□□□□□ -0.74
PABPC1-207ENST00000518716 MADDQ8WXG6 1647 aa10.4□□□□□ -0.75
PABPC1-207ENST00000518716 TJAP1Q5JTD0 557 aa10.39□□□□□ -0.75
PABPC1-207ENST00000518716 ARID3CA6NKF2 412 aa10.37□□□□□ -0.75
PABPC1-207ENST00000518716 FHOD3Q2V2M9 1422 aa10.37□□□□□ -0.75
PABPC1-207ENST00000518716 ZNF787Q6DD87 383 aa10.37□□□□□ -0.75
PABPC1-207ENST00000518716 HSPA2P54652 639 aa10.36□□□□□ -0.75
PABPC1-207ENST00000518716 CERKQ8TCT0 537 aa10.36□□□□□ -0.75
PABPC1-207ENST00000518716 ARHGEF40Q8TER5 1519 aa10.35□□□□□ -0.75
PABPC1-207ENST00000518716 PPP1R18Q6NYC8 613 aa10.35□□□□□ -0.75
PABPC1-207ENST00000518716 ZNF775Q96BV0 537 aaPredicted RBP10.35□□□□□ -0.75
PABPC1-207ENST00000518716 V9GY48 417 aaPredicted RBP10.35□□□□□ -0.75
PABPC1-207ENST00000518716 ARID4BQ4LE39 1312 aaPredicted RBP10.34□□□□□ -0.75
PABPC1-207ENST00000518716 P3H3Q8IVL6 736 aa10.34□□□□□ -0.75
PABPC1-207ENST00000518716 NUP153P49790 1475 aaKnown RBP10.34□□□□□ -0.75
PABPC1-207ENST00000518716 SAMD9Q5K651 1589 aa10.34□□□□□ -0.75
PABPC1-207ENST00000518716 RICTORQ6R327 1708 aa10.33□□□□□ -0.76
PABPC1-207ENST00000518716 EPAS1Q99814 870 aa10.33□□□□□ -0.76
PABPC1-207ENST00000518716 DENND4BO75064 1496 aaPredicted RBP10.33□□□□□ -0.76
PABPC1-207ENST00000518716 RIMS1Q86UR5 1692 aaKnown RBP10.33□□□□□ -0.76
PABPC1-207ENST00000518716 SIGLEC1Q9BZZ2 1709 aa10.33□□□□□ -0.76
PABPC1-207ENST00000518716 AKNAQ7Z591 1439 aa10.33□□□□□ -0.76
PABPC1-207ENST00000518716 PPP4CP60510 307 aa10.32□□□□□ -0.76
PABPC1-207ENST00000518716 ILDR2Q71H61 639 aa10.32□□□□□ -0.76
PABPC1-207ENST00000518716 FAM9AQ8IZU1 332 aaPredicted RBP10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 273.4 ms