RNA–Protein interactions for RNA: ENST00000517838.5

PVT1-206, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 518 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-206ENST00000517838 SYNMO15061 1565 aa11.49□□□□□ -0.57
PVT1-206ENST00000517838 TMEM94Q12767 1356 aa11.48□□□□□ -0.57
PVT1-206ENST00000517838 ARHGEF5Q12774 1597 aa11.48□□□□□ -0.57
PVT1-206ENST00000517838 ZC3H13Q5T200 1668 aaKnown RBP11.47□□□□□ -0.57
PVT1-206ENST00000517838 SLIT1O75093 1534 aa11.47□□□□□ -0.57
PVT1-206ENST00000517838 TMEM2Q9UHN6 1383 aa11.47□□□□□ -0.57
PVT1-206ENST00000517838 KCNA6P17658 529 aa11.47□□□□□ -0.57
PVT1-206ENST00000517838 SLC26A8Q96RN1 970 aa11.46□□□□□ -0.57
PVT1-206ENST00000517838 ARHGAP31Q2M1Z3 1444 aa11.45□□□□□ -0.58
PVT1-206ENST00000517838 IDI1Q13907 227 aa11.45□□□□□ -0.58
PVT1-206ENST00000517838 PROSER2Q86WR7 435 aaPredicted RBP11.45□□□□□ -0.58
PVT1-206ENST00000517838 CLEC11AQ9Y240 323 aa11.45□□□□□ -0.58
PVT1-206ENST00000517838 MROH1Q8NDA8 1641 aa11.45□□□□□ -0.58
PVT1-206ENST00000517838 KANK4Q5T7N3 995 aaPredicted RBP11.44□□□□□ -0.58
PVT1-206ENST00000517838 PCGF6Q9BYE7 350 aa11.43□□□□□ -0.58
PVT1-206ENST00000517838 SLAIN2Q9P270 581 aa11.43□□□□□ -0.58
PVT1-206ENST00000517838 STAG3Q9UJ98 1225 aa11.43□□□□□ -0.58
PVT1-206ENST00000517838 UBR1Q8IWV7 1749 aa11.43□□□□□ -0.58
PVT1-206ENST00000517838 MAST1Q9Y2H9 1570 aa11.42□□□□□ -0.58
PVT1-206ENST00000517838 RRP7BPQ9NSQ0 103 aa11.42□□□□□ -0.58
PVT1-206ENST00000517838 LRRC9Q6ZRR7 1453 aa11.41□□□□□ -0.58
PVT1-206ENST00000517838 FXR2P51116 673 aaKnown RBP eCLIP11.41□□□□□ -0.58
PVT1-206ENST00000517838 KIF15Q9NS87 1388 aa11.41□□□□□ -0.58
PVT1-206ENST00000517838 MAP3K1Q13233 1512 aa11.4□□□□□ -0.58
PVT1-206ENST00000517838 POTEHQ6S545 545 aa11.4□□□□□ -0.58
PVT1-206ENST00000517838 MYOM3Q5VTT5 1437 aa11.4□□□□□ -0.58
PVT1-206ENST00000517838 DUOX2Q9NRD8 1548 aa11.4□□□□□ -0.59
PVT1-206ENST00000517838 XIRP1Q702N8 1843 aaKnown RBP11.39□□□□□ -0.59
PVT1-206ENST00000517838 EIF2AK4Q9P2K8 1649 aaKnown RBP11.39□□□□□ -0.59
PVT1-206ENST00000517838 PIP4P2Q8N4L2 257 aa11.39□□□□□ -0.59
PVT1-206ENST00000517838 UPF1Q92900 1129 aaKnown RBP eCLIP11.39□□□□□ -0.59
PVT1-206ENST00000517838 TET3O43151 1660 aa11.39□□□□□ -0.59
PVT1-206ENST00000517838 JCADQ9P266 1359 aa11.39□□□□□ -0.59
PVT1-206ENST00000517838 PRDM15P57071 1507 aaPredicted RBP11.38□□□□□ -0.59
PVT1-206ENST00000517838 MSH6P52701 1360 aa11.38□□□□□ -0.59
PVT1-206ENST00000517838 ROBO1Q9Y6N7 1651 aa11.37□□□□□ -0.59
PVT1-206ENST00000517838 ABCC5O15440 1437 aa11.37□□□□□ -0.59
PVT1-206ENST00000517838 ERBINQ96RT1 1412 aa11.37□□□□□ -0.59
PVT1-206ENST00000517838 EFCAB6Q5THR3 1501 aa11.36□□□□□ -0.59
PVT1-206ENST00000517838 PIK3C2BO00750 1634 aa11.36□□□□□ -0.59
PVT1-206ENST00000517838 BCANQ96GW7 911 aa11.36□□□□□ -0.59
PVT1-206ENST00000517838 CEP152O94986 1710 aa11.35□□□□□ -0.59
PVT1-206ENST00000517838 TRIM26Q12899 539 aaPredicted RBP11.35□□□□□ -0.59
PVT1-206ENST00000517838 SLC52A1Q9NWF4 448 aa11.35□□□□□ -0.59
PVT1-206ENST00000517838 KANK1Q14678 1352 aa11.35□□□□□ -0.59
PVT1-206ENST00000517838 NKTRP30414 1462 aaKnown RBP11.34□□□□□ -0.59
PVT1-206ENST00000517838 PRR29P0C7W0 189 aa11.34□□□□□ -0.59
PVT1-206ENST00000517838 ZNF772Q68DY9 489 aaPredicted RBP11.34□□□□□ -0.59
PVT1-206ENST00000517838 TRIM52Q96A61 297 aa11.34□□□□□ -0.59
PVT1-206ENST00000517838 NOS1P29475 1434 aa11.34□□□□□ -0.59
PVT1-206ENST00000517838 VPS8Q8N3P4 1428 aa11.34□□□□□ -0.59
PVT1-206ENST00000517838 SPATA31A6Q5VVP1 1343 aa11.34□□□□□ -0.59
PVT1-206ENST00000517838 CHIC2Q9UKJ5 165 aa11.33□□□□□ -0.6
PVT1-206ENST00000517838 LRP6O75581 1613 aa11.33□□□□□ -0.6
PVT1-206ENST00000517838 LMTK2Q8IWU2 1503 aa11.32□□□□□ -0.6
PVT1-206ENST00000517838 MEX3CQ5U5Q3 659 aaKnown RBP11.32□□□□□ -0.6
PVT1-206ENST00000517838 TBX22Q9Y458 520 aa11.32□□□□□ -0.6
PVT1-206ENST00000517838 SRCAPQ6ZRS2 3230 aa11.32□□□□□ -0.6
PVT1-206ENST00000517838 CFAP65Q6ZU64 1925 aaKnown RBP11.31□□□□□ -0.6
PVT1-206ENST00000517838 RXRBP28702 533 aa11.31□□□□□ -0.6
PVT1-206ENST00000517838 NWD1Q149M9 1564 aa11.31□□□□□ -0.6
PVT1-206ENST00000517838 PLEKHG1Q9ULL1 1385 aa11.3□□□□□ -0.6
PVT1-206ENST00000517838 SETD1AO15047 1707 aaKnown RBP11.3□□□□□ -0.6
PVT1-206ENST00000517838 ZFYVE9O95405 1425 aa11.3□□□□□ -0.6
PVT1-206ENST00000517838 DAPK1P53355 1430 aa11.3□□□□□ -0.6
PVT1-206ENST00000517838 FGD6Q6ZV73 1430 aa11.3□□□□□ -0.6
PVT1-206ENST00000517838 C19orf44Q9H6X5 657 aa11.3□□□□□ -0.6
PVT1-206ENST00000517838 NCOA3Q9Y6Q9 1424 aa11.29□□□□□ -0.6
PVT1-206ENST00000517838 PPP1R15AO75807 674 aaPredicted RBP11.29□□□□□ -0.6
PVT1-206ENST00000517838 HDGFP51858 240 aaKnown RBP11.29□□□□□ -0.6
PVT1-206ENST00000517838 C14orf37Q86TY3 774 aa11.29□□□□□ -0.6
PVT1-206ENST00000517838 CADPS2Q86UW7 1296 aa11.29□□□□□ -0.6
PVT1-206ENST00000517838 KDM5AP29375 1690 aaKnown RBP11.29□□□□□ -0.6
PVT1-206ENST00000517838 ANKRD30AQ9BXX3 1397 aa11.28□□□□□ -0.6
PVT1-206ENST00000517838 COL16A1Q07092 1604 aaPredicted RBP11.28□□□□□ -0.6
PVT1-206ENST00000517838 RIMS2Q9UQ26 1411 aa11.28□□□□□ -0.6
PVT1-206ENST00000517838 ADGRB3O60242 1522 aa11.28□□□□□ -0.6
PVT1-206ENST00000517838 PHLPP1O60346 1717 aa11.27□□□□□ -0.61
PVT1-206ENST00000517838 NUTM2BA6NNL0 878 aaPredicted RBP11.27□□□□□ -0.61
PVT1-206ENST00000517838 NUTM2EB1AL46 878 aaPredicted RBP11.27□□□□□ -0.61
PVT1-206ENST00000517838 ATF3P18847 181 aa11.27□□□□□ -0.61
PVT1-206ENST00000517838 BRINP3Q76B58 766 aa11.27□□□□□ -0.61
PVT1-206ENST00000517838 NUTM2AQ8IVF1 878 aaPredicted RBP11.27□□□□□ -0.61
PVT1-206ENST00000517838 PRKAR2AP13861 404 aaKnown RBP11.26□□□□□ -0.61
PVT1-206ENST00000517838 NUTM2DQ5VT03 806 aaPredicted RBP11.26□□□□□ -0.61
PVT1-206ENST00000517838 ADAMTS13Q76LX8 1427 aa11.26□□□□□ -0.61
PVT1-206ENST00000517838 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.25□□□□□ -0.61
PVT1-206ENST00000517838 AFF2P51816 1311 aa11.25□□□□□ -0.61
PVT1-206ENST00000517838 CHGAP10645 457 aaKnown RBP11.24□□□□□ -0.61
PVT1-206ENST00000517838 HRCP23327 699 aa11.24□□□□□ -0.61
PVT1-206ENST00000517838 AMOTL2Q9Y2J4 779 aa11.24□□□□□ -0.61
PVT1-206ENST00000517838 RPRD2Q5VT52 1461 aaKnown RBP11.23□□□□□ -0.61
PVT1-206ENST00000517838 CDK12Q9NYV4 1490 aaPredicted RBP11.23□□□□□ -0.61
PVT1-206ENST00000517838 AHDC1Q5TGY3 1603 aaPredicted RBP11.23□□□□□ -0.61
PVT1-206ENST00000517838 PTPN23Q9H3S7 1636 aa11.23□□□□□ -0.61
PVT1-206ENST00000517838 CHADLQ6NUI6 762 aa11.22□□□□□ -0.61
PVT1-206ENST00000517838 PPARGC1BQ86YN6 1023 aaKnown RBP11.22□□□□□ -0.61
PVT1-206ENST00000517838 PIK3R4Q99570 1358 aa11.22□□□□□ -0.61
PVT1-206ENST00000517838 QTRT2Q9H974 415 aaKnown RBP11.22□□□□□ -0.61
PVT1-206ENST00000517838 PTPRUQ92729 1446 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 134.9 ms