RNA–Protein interactions for RNA: ENST00000515467.2

SDHAP3-202, Transcript of succinate dehydrogenase complex flavoprotein subunit A pseudogene 3, humanhuman

BASIC

Gene SDHAP3, Length 728 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAP3-202ENST00000515467 POLR1AO95602 1720 aaPredicted RBP23.45■■□□□ 1.34
SDHAP3-202ENST00000515467 ZNF326Q5BKZ1 582 aaKnown RBP23.45■■□□□ 1.34
SDHAP3-202ENST00000515467 ZFYVE9O95405 1425 aa23.42■■□□□ 1.34
SDHAP3-202ENST00000515467 ZNF335Q9H4Z2 1342 aaPredicted RBP23.42■■□□□ 1.34
SDHAP3-202ENST00000515467 BCANQ96GW7 911 aa23.42■■□□□ 1.34
SDHAP3-202ENST00000515467 CCDC144AA2RUR9 1427 aa23.41■■□□□ 1.34
SDHAP3-202ENST00000515467 PLEKHG1Q9ULL1 1385 aa23.39■■□□□ 1.33
SDHAP3-202ENST00000515467 IQGAP1P46940 1657 aa23.38■■□□□ 1.33
SDHAP3-202ENST00000515467 RPGRIP1LQ68CZ1 1315 aa23.38■■□□□ 1.33
SDHAP3-202ENST00000515467 CLTCL1P53675 1640 aa23.37■■□□□ 1.33
SDHAP3-202ENST00000515467 NUTM2DQ5VT03 806 aaPredicted RBP23.36■■□□□ 1.33
SDHAP3-202ENST00000515467 SLC26A8Q96RN1 970 aa23.35■■□□□ 1.33
SDHAP3-202ENST00000515467 LTBP4Q8N2S1 1624 aa23.34■■□□□ 1.33
SDHAP3-202ENST00000515467 VGFO15240 615 aaPredicted RBP23.34■■□□□ 1.33
SDHAP3-202ENST00000515467 TBX22Q9Y458 520 aa23.34■■□□□ 1.33
SDHAP3-202ENST00000515467 DISP3Q9P2K9 1392 aa23.33■■□□□ 1.33
SDHAP3-202ENST00000515467 MYO5BQ9ULV0 1848 aa23.31■■□□□ 1.32
SDHAP3-202ENST00000515467 ANKRD30BQ9BXX2 1392 aa23.31■■□□□ 1.32
SDHAP3-202ENST00000515467 CPS1P31327 1500 aa23.29■■□□□ 1.32
SDHAP3-202ENST00000515467 KIF1BO60333 1816 aa23.29■■□□□ 1.32
SDHAP3-202ENST00000515467 KCNA6P17658 529 aa23.29■■□□□ 1.32
SDHAP3-202ENST00000515467 RGL3Q3MIN7 710 aa23.29■■□□□ 1.32
SDHAP3-202ENST00000515467 SENP3Q9H4L4 574 aaPredicted RBP23.28■■□□□ 1.32
SDHAP3-202ENST00000515467 IQSEC2Q5JU85 1478 aa23.27■■□□□ 1.32
SDHAP3-202ENST00000515467 SPATA31E1Q6ZUB1 1445 aa23.26■■□□□ 1.31
SDHAP3-202ENST00000515467 NEXMIFQ5QGS0 1516 aa23.23■■□□□ 1.31
SDHAP3-202ENST00000515467 PIK3R4Q99570 1358 aa23.23■■□□□ 1.31
SDHAP3-202ENST00000515467 ADAMTS13Q76LX8 1427 aa23.23■■□□□ 1.31
SDHAP3-202ENST00000515467 DIP2AQ14689 1571 aa23.2■■□□□ 1.3
SDHAP3-202ENST00000515467 ILDR2Q71H61 639 aa23.19■■□□□ 1.3
SDHAP3-202ENST00000515467 PROSER2Q86WR7 435 aaPredicted RBP23.19■■□□□ 1.3
SDHAP3-202ENST00000515467 STAC3Q96MF2 364 aa23.18■■□□□ 1.3
SDHAP3-202ENST00000515467 SETBP1Q9Y6X0 1596 aa23.18■■□□□ 1.3
SDHAP3-202ENST00000515467 LRRC7Q96NW7 1537 aa23.16■■□□□ 1.3
SDHAP3-202ENST00000515467 ADGRF5Q8IZF2 1346 aa23.15■■□□□ 1.3
SDHAP3-202ENST00000515467 AMOTL2Q9Y2J4 779 aa23.15■■□□□ 1.3
SDHAP3-202ENST00000515467 UBAP1LF5GYI3 381 aa23.14■■□□□ 1.29
SDHAP3-202ENST00000515467 TOM1O60784 492 aa23.13■■□□□ 1.29
SDHAP3-202ENST00000515467 NKTRP30414 1462 aaKnown RBP23.12■■□□□ 1.29
SDHAP3-202ENST00000515467 METP08581 1390 aa23.11■■□□□ 1.29
SDHAP3-202ENST00000515467 TMEM94Q12767 1356 aa23.11■■□□□ 1.29
SDHAP3-202ENST00000515467 STRCP1A6NGW2 1772 aa23.1■■□□□ 1.29
SDHAP3-202ENST00000515467 NWD1Q149M9 1564 aa23.1■■□□□ 1.29
SDHAP3-202ENST00000515467 PPLO60437 1756 aa23.09■■□□□ 1.29
SDHAP3-202ENST00000515467 DHX57Q6P158 1386 aaKnown RBP23.09■■□□□ 1.29
SDHAP3-202ENST00000515467 NRXN3Q9Y4C0 1643 aa23.08■■□□□ 1.29
SDHAP3-202ENST00000515467 DCAF11Q8TEB1 546 aa23.08■■□□□ 1.29
SDHAP3-202ENST00000515467 PCGF6Q9BYE7 350 aa23.08■■□□□ 1.29
SDHAP3-202ENST00000515467 PTPRUQ92729 1446 aa23.08■■□□□ 1.28
SDHAP3-202ENST00000515467 NCOA3Q9Y6Q9 1424 aa23.08■■□□□ 1.28
SDHAP3-202ENST00000515467 CHD2O14647 1828 aaKnown RBP23.07■■□□□ 1.28
SDHAP3-202ENST00000515467 KDM2AQ9Y2K7 1162 aa23.06■■□□□ 1.28
SDHAP3-202ENST00000515467 ALKQ9UM73 1620 aa23.06■■□□□ 1.28
SDHAP3-202ENST00000515467 MYOM2P54296 1465 aa23.05■■□□□ 1.28
SDHAP3-202ENST00000515467 C14orf93Q9H972 538 aaKnown RBP23.05■■□□□ 1.28
SDHAP3-202ENST00000515467 SOCS7O14512 581 aa23.04■■□□□ 1.28
SDHAP3-202ENST00000515467 PIK3C2GO75747 1445 aa23.04■■□□□ 1.28
SDHAP3-202ENST00000515467 SCAF1Q9H7N4 1312 aaKnown RBP23.04■■□□□ 1.28
SDHAP3-202ENST00000515467 C14orf37Q86TY3 774 aa23.03■■□□□ 1.28
SDHAP3-202ENST00000515467 RBM33Q96EV2 1170 aaKnown RBP23.03■■□□□ 1.28
SDHAP3-202ENST00000515467 NRXN1Q9ULB1 1477 aa23.02■■□□□ 1.28
SDHAP3-202ENST00000515467 MSH6P52701 1360 aa23.01■■□□□ 1.27
SDHAP3-202ENST00000515467 SIN3AQ96ST3 1273 aa23.01■■□□□ 1.27
SDHAP3-202ENST00000515467 C19orf44Q9H6X5 657 aa23.01■■□□□ 1.27
SDHAP3-202ENST00000515467 IFT172Q9UG01 1749 aa23.01■■□□□ 1.27
SDHAP3-202ENST00000515467 NEUROD1Q13562 356 aa23■■□□□ 1.27
SDHAP3-202ENST00000515467 PIP4K2BP78356 416 aa22.99■■□□□ 1.27
SDHAP3-202ENST00000515467 CFAP70Q5T0N1 1121 aa22.99■■□□□ 1.27
SDHAP3-202ENST00000515467 TMEM132EQ6IEE7 984 aa22.97■■□□□ 1.27
SDHAP3-202ENST00000515467 STK26Q9P289 416 aa22.96■■□□□ 1.27
SDHAP3-202ENST00000515467 LRPPRCP42704 1394 aaKnown RBP22.96■■□□□ 1.27
SDHAP3-202ENST00000515467 ATF3P18847 181 aa22.95■■□□□ 1.26
SDHAP3-202ENST00000515467 PTCH1Q13635 1447 aa22.95■■□□□ 1.26
SDHAP3-202ENST00000515467 CADPS2Q86UW7 1296 aa22.95■■□□□ 1.26
SDHAP3-202ENST00000515467 PRAG1Q86YV5 1406 aa22.95■■□□□ 1.26
SDHAP3-202ENST00000515467 XRN1Q8IZH2 1706 aaKnown RBP22.95■■□□□ 1.26
SDHAP3-202ENST00000515467 ABCC11Q96J66 1382 aa22.95■■□□□ 1.26
SDHAP3-202ENST00000515467 L3MBTL2Q969R5 705 aa22.94■■□□□ 1.26
SDHAP3-202ENST00000515467 SIRT1Q96EB6 747 aa22.94■■□□□ 1.26
SDHAP3-202ENST00000515467 ROBO2Q9HCK4 1378 aa22.92■■□□□ 1.26
SDHAP3-202ENST00000515467 SETD1AO15047 1707 aaKnown RBP22.92■■□□□ 1.26
SDHAP3-202ENST00000515467 SLAIN2Q9P270 581 aa22.92■■□□□ 1.26
SDHAP3-202ENST00000515467 XIRP1Q702N8 1843 aaKnown RBP22.91■■□□□ 1.26
SDHAP3-202ENST00000515467 YTHDC2Q9H6S0 1430 aaKnown RBP22.91■■□□□ 1.26
SDHAP3-202ENST00000515467 TECPR2O15040 1411 aa22.9■■□□□ 1.26
SDHAP3-202ENST00000515467 LAMC1P11047 1609 aa22.89■■□□□ 1.25
SDHAP3-202ENST00000515467 DCCP43146 1447 aa22.88■■□□□ 1.25
SDHAP3-202ENST00000515467 FAM135BQ49AJ0 1406 aa22.88■■□□□ 1.25
SDHAP3-202ENST00000515467 ADGRL3Q9HAR2 1447 aa22.86■■□□□ 1.25
SDHAP3-202ENST00000515467 HSPA1LP34931 641 aa22.85■■□□□ 1.25
SDHAP3-202ENST00000515467 WAPLQ7Z5K2 1190 aa22.85■■□□□ 1.25
SDHAP3-202ENST00000515467 CLSPNQ9HAW4 1339 aa22.84■■□□□ 1.25
SDHAP3-202ENST00000515467 ASXL1Q8IXJ9 1541 aa22.84■■□□□ 1.25
SDHAP3-202ENST00000515467 TONSLQ96HA7 1378 aa22.83■■□□□ 1.25
SDHAP3-202ENST00000515467 POGKQ9P215 609 aa22.82■■□□□ 1.24
SDHAP3-202ENST00000515467 TRAK1Q9UPV9 953 aa22.82■■□□□ 1.24
SDHAP3-202ENST00000515467 PRAM1Q96QH2 718 aa22.8■■□□□ 1.24
SDHAP3-202ENST00000515467 ADGRB1O14514 1584 aa22.8■■□□□ 1.24
SDHAP3-202ENST00000515467 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.79■■□□□ 1.24
SDHAP3-202ENST00000515467 NBPF1Q3BBV0 1214 aa22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms