RNA–Protein interactions for RNA: ENST00000515355.5

SUB1-213, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SUB1, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-213ENST00000515355 RIMS2Q9UQ26 1411 aa17.02■□□□□ 0.31
SUB1-213ENST00000515355 POLR1AO95602 1720 aaPredicted RBP17.01■□□□□ 0.31
SUB1-213ENST00000515355 SLIT1O75093 1534 aa17.01■□□□□ 0.31
SUB1-213ENST00000515355 ACIN1Q9UKV3 1341 aaKnown RBP17.01■□□□□ 0.31
SUB1-213ENST00000515355 ARHGAP23Q9P227 1491 aa17.01■□□□□ 0.31
SUB1-213ENST00000515355 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.01■□□□□ 0.31
SUB1-213ENST00000515355 MED14O60244 1454 aa16.99■□□□□ 0.31
SUB1-213ENST00000515355 RGL3Q3MIN7 710 aa16.98■□□□□ 0.31
SUB1-213ENST00000515355 FBXO41Q8TF61 875 aa16.98■□□□□ 0.31
SUB1-213ENST00000515355 SPHKAPQ2M3C7 1700 aa16.98■□□□□ 0.31
SUB1-213ENST00000515355 IQGAP1P46940 1657 aa16.97■□□□□ 0.31
SUB1-213ENST00000515355 TMEM131LA2VDJ0 1609 aa16.97■□□□□ 0.31
SUB1-213ENST00000515355 TRPM2O94759 1503 aa16.95■□□□□ 0.3
SUB1-213ENST00000515355 MYO5BQ9ULV0 1848 aa16.94■□□□□ 0.3
SUB1-213ENST00000515355 CLTCL1P53675 1640 aa16.94■□□□□ 0.3
SUB1-213ENST00000515355 LTBP4Q8N2S1 1624 aa16.94■□□□□ 0.3
SUB1-213ENST00000515355 CCDC144AA2RUR9 1427 aa16.94■□□□□ 0.3
SUB1-213ENST00000515355 ZFYVE9O95405 1425 aa16.94■□□□□ 0.3
SUB1-213ENST00000515355 KDM5AP29375 1690 aaKnown RBP16.94■□□□□ 0.3
SUB1-213ENST00000515355 PLEKHG1Q9ULL1 1385 aa16.92■□□□□ 0.3
SUB1-213ENST00000515355 UBAP1LF5GYI3 381 aa16.92■□□□□ 0.3
SUB1-213ENST00000515355 HRCP23327 699 aa16.92■□□□□ 0.3
SUB1-213ENST00000515355 TRIM26Q12899 539 aaPredicted RBP16.92■□□□□ 0.3
SUB1-213ENST00000515355 RBM33Q96EV2 1170 aaKnown RBP16.91■□□□□ 0.3
SUB1-213ENST00000515355 PROSER2Q86WR7 435 aaPredicted RBP16.89■□□□□ 0.29
SUB1-213ENST00000515355 VGFO15240 615 aaPredicted RBP16.88■□□□□ 0.29
SUB1-213ENST00000515355 KCNA6P17658 529 aa16.88■□□□□ 0.29
SUB1-213ENST00000515355 PIP4K2BP78356 416 aa16.88■□□□□ 0.29
SUB1-213ENST00000515355 CPS1P31327 1500 aa16.87■□□□□ 0.29
SUB1-213ENST00000515355 TBX22Q9Y458 520 aa16.87■□□□□ 0.29
SUB1-213ENST00000515355 RPGRIP1LQ68CZ1 1315 aa16.86■□□□□ 0.29
SUB1-213ENST00000515355 KIF1BO60333 1816 aa16.86■□□□□ 0.29
SUB1-213ENST00000515355 C14orf37Q86TY3 774 aa16.85■□□□□ 0.29
SUB1-213ENST00000515355 TOM1O60784 492 aa16.83■□□□□ 0.28
SUB1-213ENST00000515355 LRRC7Q96NW7 1537 aa16.82■□□□□ 0.28
SUB1-213ENST00000515355 ADAMTS13Q76LX8 1427 aa16.82■□□□□ 0.28
SUB1-213ENST00000515355 ANKRD30BQ9BXX2 1392 aa16.82■□□□□ 0.28
SUB1-213ENST00000515355 AMOTL2Q9Y2J4 779 aa16.82■□□□□ 0.28
SUB1-213ENST00000515355 NEXMIFQ5QGS0 1516 aa16.81■□□□□ 0.28
SUB1-213ENST00000515355 KDM2AQ9Y2K7 1162 aa16.81■□□□□ 0.28
SUB1-213ENST00000515355 TMEM94Q12767 1356 aa16.8■□□□□ 0.28
SUB1-213ENST00000515355 STRCP1A6NGW2 1772 aa16.8■□□□□ 0.28
SUB1-213ENST00000515355 ADGRF5Q8IZF2 1346 aa16.8■□□□□ 0.28
SUB1-213ENST00000515355 IQSEC2Q5JU85 1478 aa16.8■□□□□ 0.28
SUB1-213ENST00000515355 PPP4R3CPQ6ZMV5 832 aa16.79■□□□□ 0.28
SUB1-213ENST00000515355 SPATA31E1Q6ZUB1 1445 aa16.79■□□□□ 0.28
SUB1-213ENST00000515355 METP08581 1390 aa16.78■□□□□ 0.28
SUB1-213ENST00000515355 DCAF11Q8TEB1 546 aa16.77■□□□□ 0.28
SUB1-213ENST00000515355 NEUROD1Q13562 356 aa16.76■□□□□ 0.27
SUB1-213ENST00000515355 STK26Q9P289 416 aa16.76■□□□□ 0.27
SUB1-213ENST00000515355 PCGF6Q9BYE7 350 aa16.75■□□□□ 0.27
SUB1-213ENST00000515355 PTPRUQ92729 1446 aa16.75■□□□□ 0.27
SUB1-213ENST00000515355 PIK3R4Q99570 1358 aa16.75■□□□□ 0.27
SUB1-213ENST00000515355 DIP2AQ14689 1571 aa16.73■□□□□ 0.27
SUB1-213ENST00000515355 SETBP1Q9Y6X0 1596 aa16.73■□□□□ 0.27
SUB1-213ENST00000515355 TMEM132EQ6IEE7 984 aa16.73■□□□□ 0.27
SUB1-213ENST00000515355 SIN3AQ96ST3 1273 aa16.73■□□□□ 0.27
SUB1-213ENST00000515355 MSH6P52701 1360 aa16.73■□□□□ 0.27
SUB1-213ENST00000515355 NKTRP30414 1462 aaKnown RBP16.72■□□□□ 0.27
SUB1-213ENST00000515355 NRXN3Q9Y4C0 1643 aa16.71■□□□□ 0.27
SUB1-213ENST00000515355 CFAP70Q5T0N1 1121 aa16.71■□□□□ 0.27
SUB1-213ENST00000515355 PPLO60437 1756 aa16.7■□□□□ 0.26
SUB1-213ENST00000515355 ATF3P18847 181 aa16.7■□□□□ 0.26
SUB1-213ENST00000515355 ALKQ9UM73 1620 aa16.7■□□□□ 0.26
SUB1-213ENST00000515355 NWD1Q149M9 1564 aa16.69■□□□□ 0.26
SUB1-213ENST00000515355 CHD2O14647 1828 aaKnown RBP16.69■□□□□ 0.26
SUB1-213ENST00000515355 HSPA1LP34931 641 aa16.68■□□□□ 0.26
SUB1-213ENST00000515355 C19orf44Q9H6X5 657 aa16.68■□□□□ 0.26
SUB1-213ENST00000515355 DHX57Q6P158 1386 aaKnown RBP16.66■□□□□ 0.26
SUB1-213ENST00000515355 C14orf93Q9H972 538 aaKnown RBP16.66■□□□□ 0.26
SUB1-213ENST00000515355 SLAIN2Q9P270 581 aa16.66■□□□□ 0.26
SUB1-213ENST00000515355 PIK3C2GO75747 1445 aa16.65■□□□□ 0.26
SUB1-213ENST00000515355 CADPS2Q86UW7 1296 aa16.65■□□□□ 0.26
SUB1-213ENST00000515355 HOXD11P31277 338 aaPredicted RBP16.64■□□□□ 0.25
SUB1-213ENST00000515355 WAPLQ7Z5K2 1190 aa16.64■□□□□ 0.25
SUB1-213ENST00000515355 ROBO2Q9HCK4 1378 aa16.64■□□□□ 0.25
SUB1-213ENST00000515355 XIRP1Q702N8 1843 aaKnown RBP16.63■□□□□ 0.25
SUB1-213ENST00000515355 SAFB2Q14151 953 aaKnown RBP eCLIP16.63■□□□□ 0.25
SUB1-213ENST00000515355 NCOA3Q9Y6Q9 1424 aa16.62■□□□□ 0.25
SUB1-213ENST00000515355 MYOM2P54296 1465 aa16.61■□□□□ 0.25
SUB1-213ENST00000515355 L3MBTL2Q969R5 705 aa16.61■□□□□ 0.25
SUB1-213ENST00000515355 TRAK1Q9UPV9 953 aa16.61■□□□□ 0.25
SUB1-213ENST00000515355 IFT172Q9UG01 1749 aa16.61■□□□□ 0.25
SUB1-213ENST00000515355 STAC3Q96MF2 364 aa16.6■□□□□ 0.25
SUB1-213ENST00000515355 POGKQ9P215 609 aa16.6■□□□□ 0.25
SUB1-213ENST00000515355 LRPPRCP42704 1394 aaKnown RBP16.6■□□□□ 0.25
SUB1-213ENST00000515355 XRN1Q8IZH2 1706 aaKnown RBP16.59■□□□□ 0.25
SUB1-213ENST00000515355 NUTM2FA1L443 756 aa16.59■□□□□ 0.25
SUB1-213ENST00000515355 YTHDC2Q9H6S0 1430 aaKnown RBP16.59■□□□□ 0.25
SUB1-213ENST00000515355 SETD1AO15047 1707 aaKnown RBP16.57■□□□□ 0.24
SUB1-213ENST00000515355 NRXN1Q9ULB1 1477 aa16.57■□□□□ 0.24
SUB1-213ENST00000515355 PTCH1Q13635 1447 aa16.57■□□□□ 0.24
SUB1-213ENST00000515355 PLEKHH1Q9ULM0 1364 aa16.57■□□□□ 0.24
SUB1-213ENST00000515355 PRAM1Q96QH2 718 aa16.57■□□□□ 0.24
SUB1-213ENST00000515355 FAM135BQ49AJ0 1406 aa16.56■□□□□ 0.24
SUB1-213ENST00000515355 ADGRL3Q9HAR2 1447 aa16.56■□□□□ 0.24
SUB1-213ENST00000515355 ABCC11Q96J66 1382 aa16.56■□□□□ 0.24
SUB1-213ENST00000515355 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.56■□□□□ 0.24
SUB1-213ENST00000515355 ASXL1Q8IXJ9 1541 aa16.55■□□□□ 0.24
SUB1-213ENST00000515355 NBPF1Q3BBV0 1214 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms