RNA–Protein interactions for RNA: ENST00000513398.1

ACTN3-203, Transcript of actinin alpha 3 (gene/pseudogene), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTN3, Length 2,939 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN3-203ENST00000513398 SPATA31E1Q6ZUB1 1445 aa24.02■■□□□ 1.44
ACTN3-203ENST00000513398 CFAP70Q5T0N1 1121 aa24.01■■□□□ 1.43
ACTN3-203ENST00000513398 CCDC136Q96JN2 1154 aa24.01■■□□□ 1.43
ACTN3-203ENST00000513398 ABCC3O15438 1527 aa24.01■■□□□ 1.43
ACTN3-203ENST00000513398 CLTCL1P53675 1640 aa24■■□□□ 1.43
ACTN3-203ENST00000513398 NUDCQ9Y266 331 aa24■■□□□ 1.43
ACTN3-203ENST00000513398 TET3O43151 1660 aa23.99■■□□□ 1.43
ACTN3-203ENST00000513398 VWDEQ8N2E2 1590 aa23.99■■□□□ 1.43
ACTN3-203ENST00000513398 EIF2AK4Q9P2K8 1649 aaKnown RBP23.99■■□□□ 1.43
ACTN3-203ENST00000513398 EFCAB6Q5THR3 1501 aa23.98■■□□□ 1.43
ACTN3-203ENST00000513398 POLR1AO95602 1720 aaPredicted RBP23.97■■□□□ 1.43
ACTN3-203ENST00000513398 PTPRTO14522 1441 aa23.97■■□□□ 1.43
ACTN3-203ENST00000513398 TMEM132EQ6IEE7 984 aa23.97■■□□□ 1.43
ACTN3-203ENST00000513398 ANP32AP39687 249 aaKnown RBP23.97■■□□□ 1.43
ACTN3-203ENST00000513398 PRAG1Q86YV5 1406 aa23.95■■□□□ 1.42
ACTN3-203ENST00000513398 SPHKAPQ2M3C7 1700 aa23.94■■□□□ 1.42
ACTN3-203ENST00000513398 ZMYM4Q5VZL5 1548 aa23.94■■□□□ 1.42
ACTN3-203ENST00000513398 TRPM2O94759 1503 aa23.93■■□□□ 1.42
ACTN3-203ENST00000513398 RNF123Q5XPI4 1314 aa23.93■■□□□ 1.42
ACTN3-203ENST00000513398 RNF17Q9BXT8 1623 aaKnown RBP23.92■■□□□ 1.42
ACTN3-203ENST00000513398 SENP3-EIF4A1A0A087X0R7 540 aa23.9■■□□□ 1.42
ACTN3-203ENST00000513398 IPO9Q96P70 1041 aaKnown RBP23.9■■□□□ 1.42
ACTN3-203ENST00000513398 NOS1P29475 1434 aa23.9■■□□□ 1.42
ACTN3-203ENST00000513398 SAFB2Q14151 953 aaKnown RBP eCLIP23.89■■□□□ 1.42
ACTN3-203ENST00000513398 STK26Q9P289 416 aa23.87■■□□□ 1.41
ACTN3-203ENST00000513398 TRAK1Q9UPV9 953 aa23.87■■□□□ 1.41
ACTN3-203ENST00000513398 ZBTB47Q9UFB7 747 aaPredicted RBP23.86■■□□□ 1.41
ACTN3-203ENST00000513398 CAMSAP1Q5T5Y3 1602 aa23.86■■□□□ 1.41
ACTN3-203ENST00000513398 ZMYM3Q14202 1370 aa23.86■■□□□ 1.41
ACTN3-203ENST00000513398 UHRF1BP1Q6BDS2 1440 aa23.85■■□□□ 1.41
ACTN3-203ENST00000513398 RTL5Q5HYW3 569 aaPredicted RBP23.85■■□□□ 1.41
ACTN3-203ENST00000513398 LMTK2Q8IWU2 1503 aa23.83■■□□□ 1.41
ACTN3-203ENST00000513398 ARHGEF40Q8TER5 1519 aa23.83■■□□□ 1.41
ACTN3-203ENST00000513398 RALGAPBQ86X10 1494 aa23.83■■□□□ 1.41
ACTN3-203ENST00000513398 CLTCQ00610 1675 aaKnown RBP23.82■■□□□ 1.4
ACTN3-203ENST00000513398 TMC1Q8TDI8 760 aa23.81■■□□□ 1.4
ACTN3-203ENST00000513398 BCORL1Q5H9F3 1711 aa23.81■■□□□ 1.4
ACTN3-203ENST00000513398 MROH2AA6NES4 1674 aa23.8■■□□□ 1.4
ACTN3-203ENST00000513398 PNISRQ8TF01 805 aaKnown RBP23.8■■□□□ 1.4
ACTN3-203ENST00000513398 SYNMO15061 1565 aa23.8■■□□□ 1.4
ACTN3-203ENST00000513398 SLC52A1Q9NWF4 448 aa23.78■■□□□ 1.4
ACTN3-203ENST00000513398 KIF1BO60333 1816 aa23.73■■□□□ 1.39
ACTN3-203ENST00000513398 ERVK-7P63135 1459 aa23.72■■□□□ 1.39
ACTN3-203ENST00000513398 DISP3Q9P2K9 1392 aa23.72■■□□□ 1.39
ACTN3-203ENST00000513398 NPM2Q86SE8 214 aaKnown RBP23.72■■□□□ 1.39
ACTN3-203ENST00000513398 TRPM1Q7Z4N2 1603 aa23.72■■□□□ 1.39
ACTN3-203ENST00000513398 TESK2Q96S53 571 aa23.71■■□□□ 1.39
ACTN3-203ENST00000513398 VGFO15240 615 aaPredicted RBP23.71■■□□□ 1.39
ACTN3-203ENST00000513398 AGLP35573 1532 aa23.7■■□□□ 1.39
ACTN3-203ENST00000513398 ARHGAP31Q2M1Z3 1444 aa23.7■■□□□ 1.38
ACTN3-203ENST00000513398 RRP1P56182 461 aaKnown RBP23.69■■□□□ 1.38
ACTN3-203ENST00000513398 PREX1Q8TCU6 1659 aa23.67■■□□□ 1.38
ACTN3-203ENST00000513398 MADDQ8WXG6 1647 aa23.67■■□□□ 1.38
ACTN3-203ENST00000513398 EXOC6Q8TAG9 804 aa23.67■■□□□ 1.38
ACTN3-203ENST00000513398 ADGRB3O60242 1522 aa23.67■■□□□ 1.38
ACTN3-203ENST00000513398 LRPPRCP42704 1394 aaKnown RBP23.66■■□□□ 1.38
ACTN3-203ENST00000513398 PPP6R1Q9UPN7 881 aa23.66■■□□□ 1.38
ACTN3-203ENST00000513398 MYO5BQ9ULV0 1848 aa23.65■■□□□ 1.38
ACTN3-203ENST00000513398 TCERG1O14776 1098 aaKnown RBP23.64■■□□□ 1.38
ACTN3-203ENST00000513398 C14orf93Q9H972 538 aaKnown RBP23.64■■□□□ 1.38
ACTN3-203ENST00000513398 BRD4O60885 1362 aaPredicted RBP23.64■■□□□ 1.37
ACTN3-203ENST00000513398 MYBBP1AQ9BQG0 1328 aaKnown RBP23.64■■□□□ 1.37
ACTN3-203ENST00000513398 TNRQ92752 1358 aa23.63■■□□□ 1.37
ACTN3-203ENST00000513398 TMF1P82094 1093 aa23.63■■□□□ 1.37
ACTN3-203ENST00000513398 GPRASP1Q5JY77 1395 aa23.63■■□□□ 1.37
ACTN3-203ENST00000513398 RCAN3Q9UKA8 241 aa23.62■■□□□ 1.37
ACTN3-203ENST00000513398 SLC26A8Q96RN1 970 aa23.61■■□□□ 1.37
ACTN3-203ENST00000513398 REREQ9P2R6 1566 aa23.61■■□□□ 1.37
ACTN3-203ENST00000513398 PIK3C2BO00750 1634 aa23.61■■□□□ 1.37
ACTN3-203ENST00000513398 CC2D1BQ5T0F9 858 aaKnown RBP23.61■■□□□ 1.37
ACTN3-203ENST00000513398 SALL2Q9Y467 1007 aaPredicted RBP23.61■■□□□ 1.37
ACTN3-203ENST00000513398 ZC3H13Q5T200 1668 aaKnown RBP23.6■■□□□ 1.37
ACTN3-203ENST00000513398 PDE4AP27815 886 aa23.6■■□□□ 1.37
ACTN3-203ENST00000513398 RALBP1Q15311 655 aa23.6■■□□□ 1.37
ACTN3-203ENST00000513398 PANK3Q9H999 370 aa23.59■■□□□ 1.37
ACTN3-203ENST00000513398 LAS1LQ9Y4W2 734 aaKnown RBP23.59■■□□□ 1.37
ACTN3-203ENST00000513398 RPGRIP1LQ68CZ1 1315 aa23.58■■□□□ 1.37
ACTN3-203ENST00000513398 LTKP29376 864 aa23.58■■□□□ 1.36
ACTN3-203ENST00000513398 WAPLQ7Z5K2 1190 aa23.58■■□□□ 1.36
ACTN3-203ENST00000513398 PIK3C2GO75747 1445 aa23.58■■□□□ 1.36
ACTN3-203ENST00000513398 MINK1Q8N4C8 1332 aaPredicted RBP23.57■■□□□ 1.36
ACTN3-203ENST00000513398 KTN1Q86UP2 1357 aaKnown RBP23.56■■□□□ 1.36
ACTN3-203ENST00000513398 SCAF11Q99590 1463 aaKnown RBP23.56■■□□□ 1.36
ACTN3-203ENST00000513398 NEXMIFQ5QGS0 1516 aa23.55■■□□□ 1.36
ACTN3-203ENST00000513398 A2ML1A8K2U0 1454 aa23.55■■□□□ 1.36
ACTN3-203ENST00000513398 NEFMP07197 916 aa23.55■■□□□ 1.36
ACTN3-203ENST00000513398 TXNDC2Q86VQ3 553 aa23.55■■□□□ 1.36
ACTN3-203ENST00000513398 RIMS2Q9UQ26 1411 aa23.55■■□□□ 1.36
ACTN3-203ENST00000513398 PRAM1Q96QH2 718 aa23.54■■□□□ 1.36
ACTN3-203ENST00000513398 CENPJQ9HC77 1338 aaPredicted RBP23.54■■□□□ 1.36
ACTN3-203ENST00000513398 STAC3Q96MF2 364 aa23.54■■□□□ 1.36
ACTN3-203ENST00000513398 BACH2Q9BYV9 841 aa23.54■■□□□ 1.36
ACTN3-203ENST00000513398 POGKQ9P215 609 aa23.54■■□□□ 1.36
ACTN3-203ENST00000513398 TMEM131LA2VDJ0 1609 aa23.53■■□□□ 1.36
ACTN3-203ENST00000513398 MYOM2P54296 1465 aa23.53■■□□□ 1.36
ACTN3-203ENST00000513398 CABP2Q9NPB3 220 aa23.53■■□□□ 1.36
ACTN3-203ENST00000513398 MS4A1P11836 297 aa23.52■■□□□ 1.36
ACTN3-203ENST00000513398 NUTM2FA1L443 756 aa23.52■■□□□ 1.36
ACTN3-203ENST00000513398 PPLO60437 1756 aa23.51■■□□□ 1.35
ACTN3-203ENST00000513398 RBM33Q96EV2 1170 aaKnown RBP23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms