RNA–Protein interactions for RNA: ENST00000511604.5

CPNE4-208, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 2,503 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-208ENST00000511604 MYBBP1AQ9BQG0 1328 aaKnown RBP9.17□□□□□ -0.94
CPNE4-208ENST00000511604 ANKRD30BQ9BXX2 1392 aa9.17□□□□□ -0.94
CPNE4-208ENST00000511604 CFAP43Q8NDM7 1665 aa9.17□□□□□ -0.94
CPNE4-208ENST00000511604 HAP1P54257 671 aaPredicted RBP9.17□□□□□ -0.94
CPNE4-208ENST00000511604 ZNF710Q8N1W2 664 aa9.17□□□□□ -0.94
CPNE4-208ENST00000511604 PANK3Q9H999 370 aa9.17□□□□□ -0.94
CPNE4-208ENST00000511604 CNPY4Q8N129 248 aa9.16□□□□□ -0.94
CPNE4-208ENST00000511604 IGSF3O75054 1194 aa9.16□□□□□ -0.94
CPNE4-208ENST00000511604 AEBP1Q8IUX7 1158 aa9.16□□□□□ -0.94
CPNE4-208ENST00000511604 CARMIL1Q5VZK9 1371 aa9.16□□□□□ -0.94
CPNE4-208ENST00000511604 ZNF771Q7L3S4 317 aaPredicted RBP9.15□□□□□ -0.94
CPNE4-208ENST00000511604 MYRIPQ8NFW9 859 aa9.15□□□□□ -0.94
CPNE4-208ENST00000511604 SLC52A1Q9NWF4 448 aa9.15□□□□□ -0.94
CPNE4-208ENST00000511604 HDAC5Q9UQL6 1122 aa9.15□□□□□ -0.94
CPNE4-208ENST00000511604 BRD4O60885 1362 aaPredicted RBP9.15□□□□□ -0.94
CPNE4-208ENST00000511604 IFT140Q96RY7 1462 aa9.15□□□□□ -0.94
CPNE4-208ENST00000511604 NBPF1Q3BBV0 1214 aa9.15□□□□□ -0.94
CPNE4-208ENST00000511604 CYB5RLQ6IPT4 315 aa9.15□□□□□ -0.94
CPNE4-208ENST00000511604 JARID2Q92833 1246 aaPredicted RBP9.15□□□□□ -0.94
CPNE4-208ENST00000511604 MTUS2Q5JR59 1369 aa9.15□□□□□ -0.94
CPNE4-208ENST00000511604 ZKSCAN5Q9Y2L8 839 aa9.14□□□□□ -0.95
CPNE4-208ENST00000511604 CLGNO14967 610 aa9.14□□□□□ -0.95
CPNE4-208ENST00000511604 PSEN1P49768 467 aa9.14□□□□□ -0.95
CPNE4-208ENST00000511604 SKOR2Q2VWA4 1001 aaPredicted RBP9.14□□□□□ -0.95
CPNE4-208ENST00000511604 CC2D1BQ5T0F9 858 aaKnown RBP9.14□□□□□ -0.95
CPNE4-208ENST00000511604 TBC1D32Q96NH3 1257 aa9.14□□□□□ -0.95
CPNE4-208ENST00000511604 CFTRP13569 1480 aa9.14□□□□□ -0.95
CPNE4-208ENST00000511604 ST20-MTHFSA0A0A6YYL1 179 aa9.13□□□□□ -0.95
CPNE4-208ENST00000511604 BCAR3O75815 825 aa9.13□□□□□ -0.95
CPNE4-208ENST00000511604 MCM5P33992 734 aa9.13□□□□□ -0.95
CPNE4-208ENST00000511604 SPINK5Q9NQ38 1064 aaPredicted RBP9.13□□□□□ -0.95
CPNE4-208ENST00000511604 RPRD2Q5VT52 1461 aaKnown RBP9.13□□□□□ -0.95
CPNE4-208ENST00000511604 KIF15Q9NS87 1388 aa9.13□□□□□ -0.95
CPNE4-208ENST00000511604 SPDYE4A6NLX3 237 aa9.13□□□□□ -0.95
CPNE4-208ENST00000511604 SOX12O15370 315 aa9.13□□□□□ -0.95
CPNE4-208ENST00000511604 DUSP27Q5VZP5 1158 aa9.13□□□□□ -0.95
CPNE4-208ENST00000511604 UPF2Q9HAU5 1272 aaKnown RBP9.13□□□□□ -0.95
CPNE4-208ENST00000511604 NGEFQ8N5V2 710 aa9.12□□□□□ -0.95
CPNE4-208ENST00000511604 TSC1Q92574 1164 aa9.12□□□□□ -0.95
CPNE4-208ENST00000511604 PDLIM2Q96JY6 352 aa9.12□□□□□ -0.95
CPNE4-208ENST00000511604 PLEKHH1Q9ULM0 1364 aa9.12□□□□□ -0.95
CPNE4-208ENST00000511604 ARID3CA6NKF2 412 aa9.11□□□□□ -0.95
CPNE4-208ENST00000511604 GTF2F1P35269 517 aaKnown RBP eCLIP9.11□□□□□ -0.95
CPNE4-208ENST00000511604 WWC1Q8IX03 1113 aa9.11□□□□□ -0.95
CPNE4-208ENST00000511604 HOMEZQ8IX15 550 aa9.11□□□□□ -0.95
CPNE4-208ENST00000511604 SLC4A1APQ9BWU0 796 aaKnown RBP9.11□□□□□ -0.95
CPNE4-208ENST00000511604 URB2Q14146 1524 aaKnown RBP9.11□□□□□ -0.95
CPNE4-208ENST00000511604 MYCNP04198 464 aaPredicted RBP9.11□□□□□ -0.95
CPNE4-208ENST00000511604 ADAMTS8Q9UP79 889 aa9.11□□□□□ -0.95
CPNE4-208ENST00000511604 IBTKQ9P2D0 1353 aaPredicted RBP9.11□□□□□ -0.95
CPNE4-208ENST00000511604 CCDC66A2RUB6 948 aa9.1□□□□□ -0.95
CPNE4-208ENST00000511604 APPP05067 770 aa9.1□□□□□ -0.95
CPNE4-208ENST00000511604 TIGD1Q96MW7 591 aa9.1□□□□□ -0.95
CPNE4-208ENST00000511604 ZNF692Q9BU19 519 aaPredicted RBP9.1□□□□□ -0.95
CPNE4-208ENST00000511604 YY1AP1Q9H869 796 aa9.1□□□□□ -0.95
CPNE4-208ENST00000511604 CASKIN1Q8WXD9 1431 aa9.1□□□□□ -0.95
CPNE4-208ENST00000511604 ZBTB7CA1YPR0 619 aa9.1□□□□□ -0.95
CPNE4-208ENST00000511604 TRIM6-TRIM34B2RNG4 842 aa9.1□□□□□ -0.95
CPNE4-208ENST00000511604 RALBP1Q15311 655 aa9.1□□□□□ -0.95
CPNE4-208ENST00000511604 NLRP13Q86W25 1043 aa9.1□□□□□ -0.95
CPNE4-208ENST00000511604 PRIMPOLQ96LW4 560 aa9.1□□□□□ -0.95
CPNE4-208ENST00000511604 MIA2Q96PC5 1412 aa9.1□□□□□ -0.95
CPNE4-208ENST00000511604 TRIM34Q9BYJ4 488 aa9.1□□□□□ -0.95
CPNE4-208ENST00000511604 GEMIN8Q9NWZ8 242 aaKnown RBP9.1□□□□□ -0.95
CPNE4-208ENST00000511604 TULP2O00295 520 aa9.09□□□□□ -0.95
CPNE4-208ENST00000511604 CAPN2P17655 700 aa9.09□□□□□ -0.95
CPNE4-208ENST00000511604 PTMSP20962 102 aa9.09□□□□□ -0.95
CPNE4-208ENST00000511604 CHMP4CQ96CF2 233 aa9.09□□□□□ -0.95
CPNE4-208ENST00000511604 KDM2AQ9Y2K7 1162 aa9.09□□□□□ -0.95
CPNE4-208ENST00000511604 MAPK8IP3Q9UPT6 1336 aa9.09□□□□□ -0.95
CPNE4-208ENST00000511604 HMGN5P82970 282 aaKnown RBP9.09□□□□□ -0.95
CPNE4-208ENST00000511604 PDCL2Q8N4E4 241 aa9.09□□□□□ -0.95
CPNE4-208ENST00000511604 CNKSR2Q8WXI2 1034 aa9.09□□□□□ -0.95
CPNE4-208ENST00000511604 GBP4Q96PP9 640 aa9.09□□□□□ -0.95
CPNE4-208ENST00000511604 CARD11Q9BXL7 1154 aa9.09□□□□□ -0.95
CPNE4-208ENST00000511604 PER1O15534 1290 aaPredicted RBP9.08□□□□□ -0.96
CPNE4-208ENST00000511604 RBM25P49756 843 aaKnown RBP9.08□□□□□ -0.96
CPNE4-208ENST00000511604 GABPB1Q06547 395 aaPredicted RBP9.08□□□□□ -0.96
CPNE4-208ENST00000511604 AXDND1Q5T1B0 1012 aaPredicted RBP9.08□□□□□ -0.96
CPNE4-208ENST00000511604 TNPO1Q92973 898 aaKnown RBP9.08□□□□□ -0.96
CPNE4-208ENST00000511604 ZBTB9Q96C00 473 aa9.08□□□□□ -0.96
CPNE4-208ENST00000511604 TNNQ9UQP3 1299 aa9.08□□□□□ -0.96
CPNE4-208ENST00000511604 ROCK2O75116 1388 aaKnown RBP9.08□□□□□ -0.96
CPNE4-208ENST00000511604 FYCO1Q9BQS8 1478 aa9.08□□□□□ -0.96
CPNE4-208ENST00000511604 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.08□□□□□ -0.96
CPNE4-208ENST00000511604 KIF3AQ9Y496 699 aa9.08□□□□□ -0.96
CPNE4-208ENST00000511604 DMRT2Q9Y5R5 561 aa9.08□□□□□ -0.96
CPNE4-208ENST00000511604 NINLQ9Y2I6 1382 aa9.08□□□□□ -0.96
CPNE4-208ENST00000511604 HECW1Q76N89 1606 aa9.08□□□□□ -0.96
CPNE4-208ENST00000511604 SCAPERQ9BY12 1400 aa9.08□□□□□ -0.96
CPNE4-208ENST00000511604 U2AF2P26368 475 aaKnown RBP eCLIP9.07□□□□□ -0.96
CPNE4-208ENST00000511604 PANK1Q8TE04 598 aa9.07□□□□□ -0.96
CPNE4-208ENST00000511604 ZNF622Q969S3 477 aaKnown RBP eCLIP9.07□□□□□ -0.96
CPNE4-208ENST00000511604 FGD5Q6ZNL6 1462 aa9.07□□□□□ -0.96
CPNE4-208ENST00000511604 CHD1O14646 1710 aa9.07□□□□□ -0.96
CPNE4-208ENST00000511604 DDIT3P35638 169 aa9.07□□□□□ -0.96
CPNE4-208ENST00000511604 TSPYL1Q9H0U9 437 aa9.07□□□□□ -0.96
CPNE4-208ENST00000511604 EIF4G3O43432 1585 aaKnown RBP9.07□□□□□ -0.96
CPNE4-208ENST00000511604 PARD3Q8TEW0 1356 aa9.06□□□□□ -0.96
CPNE4-208ENST00000511604 HSP90AB1P08238 724 aaKnown RBP9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms