RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 CLTCL1P53675 1640 aa20.79■□□□□ 0.92
DDX41-212ENST00000511040 ZFYVE9O95405 1425 aa20.78■□□□□ 0.92
DDX41-212ENST00000511040 PPP1R15AO75807 674 aaPredicted RBP20.78■□□□□ 0.92
DDX41-212ENST00000511040 BCANQ96GW7 911 aa20.78■□□□□ 0.92
DDX41-212ENST00000511040 FBXO41Q8TF61 875 aa20.77■□□□□ 0.92
DDX41-212ENST00000511040 ZNF326Q5BKZ1 582 aaKnown RBP20.75■□□□□ 0.91
DDX41-212ENST00000511040 SLC26A8Q96RN1 970 aa20.75■□□□□ 0.91
DDX41-212ENST00000511040 HDGFP51858 240 aaKnown RBP20.73■□□□□ 0.91
DDX41-212ENST00000511040 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.72■□□□□ 0.91
DDX41-212ENST00000511040 STRCP1A6NGW2 1772 aa20.72■□□□□ 0.91
DDX41-212ENST00000511040 ACIN1Q9UKV3 1341 aaKnown RBP20.71■□□□□ 0.91
DDX41-212ENST00000511040 PLEKHG1Q9ULL1 1385 aa20.71■□□□□ 0.91
DDX41-212ENST00000511040 CPS1P31327 1500 aa20.7■□□□□ 0.9
DDX41-212ENST00000511040 KIF1BO60333 1816 aa20.7■□□□□ 0.9
DDX41-212ENST00000511040 CCDC144AA2RUR9 1427 aa20.66■□□□□ 0.9
DDX41-212ENST00000511040 IQSEC2Q5JU85 1478 aa20.65■□□□□ 0.9
DDX41-212ENST00000511040 HRCP23327 699 aa20.64■□□□□ 0.89
DDX41-212ENST00000511040 NEXMIFQ5QGS0 1516 aa20.63■□□□□ 0.89
DDX41-212ENST00000511040 LRRC7Q96NW7 1537 aa20.63■□□□□ 0.89
DDX41-212ENST00000511040 ADAMTS13Q76LX8 1427 aa20.62■□□□□ 0.89
DDX41-212ENST00000511040 UBAP1LF5GYI3 381 aa20.62■□□□□ 0.89
DDX41-212ENST00000511040 KCNA6P17658 529 aa20.61■□□□□ 0.89
DDX41-212ENST00000511040 RGL3Q3MIN7 710 aa20.61■□□□□ 0.89
DDX41-212ENST00000511040 TBX22Q9Y458 520 aa20.6■□□□□ 0.89
DDX41-212ENST00000511040 RBM33Q96EV2 1170 aaKnown RBP20.59■□□□□ 0.89
DDX41-212ENST00000511040 NRXN3Q9Y4C0 1643 aa20.57■□□□□ 0.88
DDX41-212ENST00000511040 SPATA31E1Q6ZUB1 1445 aa20.57■□□□□ 0.88
DDX41-212ENST00000511040 PROSER2Q86WR7 435 aaPredicted RBP20.57■□□□□ 0.88
DDX41-212ENST00000511040 RPGRIP1LQ68CZ1 1315 aa20.56■□□□□ 0.88
DDX41-212ENST00000511040 DIP2AQ14689 1571 aa20.56■□□□□ 0.88
DDX41-212ENST00000511040 SETBP1Q9Y6X0 1596 aa20.56■□□□□ 0.88
DDX41-212ENST00000511040 NWD1Q149M9 1564 aa20.55■□□□□ 0.88
DDX41-212ENST00000511040 PPLO60437 1756 aa20.55■□□□□ 0.88
DDX41-212ENST00000511040 VGFO15240 615 aaPredicted RBP20.55■□□□□ 0.88
DDX41-212ENST00000511040 ANKRD30BQ9BXX2 1392 aa20.55■□□□□ 0.88
DDX41-212ENST00000511040 CHD2O14647 1828 aaKnown RBP20.55■□□□□ 0.88
DDX41-212ENST00000511040 TMEM94Q12767 1356 aa20.54■□□□□ 0.88
DDX41-212ENST00000511040 XIRP1Q702N8 1843 aaKnown RBP20.53■□□□□ 0.88
DDX41-212ENST00000511040 PIP4K2BP78356 416 aa20.53■□□□□ 0.88
DDX41-212ENST00000511040 SCAF1Q9H7N4 1312 aaKnown RBP20.53■□□□□ 0.88
DDX41-212ENST00000511040 METP08581 1390 aa20.52■□□□□ 0.88
DDX41-212ENST00000511040 TRIM26Q12899 539 aaPredicted RBP20.52■□□□□ 0.88
DDX41-212ENST00000511040 PTPRUQ92729 1446 aa20.52■□□□□ 0.87
DDX41-212ENST00000511040 NKTRP30414 1462 aaKnown RBP20.51■□□□□ 0.87
DDX41-212ENST00000511040 TOM1O60784 492 aa20.51■□□□□ 0.87
DDX41-212ENST00000511040 ADGRF5Q8IZF2 1346 aa20.51■□□□□ 0.87
DDX41-212ENST00000511040 AMOTL2Q9Y2J4 779 aa20.5■□□□□ 0.87
DDX41-212ENST00000511040 PIK3R4Q99570 1358 aa20.49■□□□□ 0.87
DDX41-212ENST00000511040 ALKQ9UM73 1620 aa20.48■□□□□ 0.87
DDX41-212ENST00000511040 IFT172Q9UG01 1749 aa20.47■□□□□ 0.87
DDX41-212ENST00000511040 C14orf37Q86TY3 774 aa20.44■□□□□ 0.86
DDX41-212ENST00000511040 SETD1AO15047 1707 aaKnown RBP20.44■□□□□ 0.86
DDX41-212ENST00000511040 XRN1Q8IZH2 1706 aaKnown RBP20.44■□□□□ 0.86
DDX41-212ENST00000511040 MSH6P52701 1360 aa20.41■□□□□ 0.86
DDX41-212ENST00000511040 KDM2AQ9Y2K7 1162 aa20.4■□□□□ 0.86
DDX41-212ENST00000511040 PIK3C2GO75747 1445 aa20.39■□□□□ 0.85
DDX41-212ENST00000511040 HSPA1LP34931 641 aa20.38■□□□□ 0.85
DDX41-212ENST00000511040 ILDR2Q71H61 639 aa20.38■□□□□ 0.85
DDX41-212ENST00000511040 MYOM2P54296 1465 aa20.37■□□□□ 0.85
DDX41-212ENST00000511040 SOCS7O14512 581 aa20.37■□□□□ 0.85
DDX41-212ENST00000511040 TMEM132EQ6IEE7 984 aa20.37■□□□□ 0.85
DDX41-212ENST00000511040 DCAF11Q8TEB1 546 aa20.37■□□□□ 0.85
DDX41-212ENST00000511040 STK26Q9P289 416 aa20.37■□□□□ 0.85
DDX41-212ENST00000511040 NCOA3Q9Y6Q9 1424 aa20.36■□□□□ 0.85
DDX41-212ENST00000511040 ROBO2Q9HCK4 1378 aa20.35■□□□□ 0.85
DDX41-212ENST00000511040 CFAP70Q5T0N1 1121 aa20.35■□□□□ 0.85
DDX41-212ENST00000511040 NRXN1Q9ULB1 1477 aa20.35■□□□□ 0.85
DDX41-212ENST00000511040 DHX57Q6P158 1386 aaKnown RBP20.34■□□□□ 0.85
DDX41-212ENST00000511040 ASXL1Q8IXJ9 1541 aa20.34■□□□□ 0.85
DDX41-212ENST00000511040 C19orf44Q9H6X5 657 aa20.34■□□□□ 0.85
DDX41-212ENST00000511040 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.33■□□□□ 0.85
DDX41-212ENST00000511040 SIN3AQ96ST3 1273 aa20.33■□□□□ 0.85
DDX41-212ENST00000511040 C14orf93Q9H972 538 aaKnown RBP20.33■□□□□ 0.85
DDX41-212ENST00000511040 ATF3P18847 181 aa20.32■□□□□ 0.84
DDX41-212ENST00000511040 SLAIN2Q9P270 581 aa20.32■□□□□ 0.84
DDX41-212ENST00000511040 PTCH1Q13635 1447 aa20.31■□□□□ 0.84
DDX41-212ENST00000511040 NEUROD1Q13562 356 aa20.3■□□□□ 0.84
DDX41-212ENST00000511040 LRPPRCP42704 1394 aaKnown RBP20.3■□□□□ 0.84
DDX41-212ENST00000511040 CADPS2Q86UW7 1296 aa20.29■□□□□ 0.84
DDX41-212ENST00000511040 FAM135BQ49AJ0 1406 aa20.28■□□□□ 0.84
DDX41-212ENST00000511040 NALCNQ8IZF0 1738 aa20.28■□□□□ 0.84
DDX41-212ENST00000511040 ROBO1Q9Y6N7 1651 aa20.28■□□□□ 0.84
DDX41-212ENST00000511040 PRAG1Q86YV5 1406 aa20.27■□□□□ 0.84
DDX41-212ENST00000511040 YTHDC2Q9H6S0 1430 aaKnown RBP20.27■□□□□ 0.84
DDX41-212ENST00000511040 ADGRL3Q9HAR2 1447 aa20.27■□□□□ 0.84
DDX41-212ENST00000511040 WAPLQ7Z5K2 1190 aa20.27■□□□□ 0.84
DDX41-212ENST00000511040 LAMC1P11047 1609 aa20.27■□□□□ 0.83
DDX41-212ENST00000511040 PCGF6Q9BYE7 350 aa20.26■□□□□ 0.83
DDX41-212ENST00000511040 ABCC11Q96J66 1382 aa20.25■□□□□ 0.83
DDX41-212ENST00000511040 PLEKHH1Q9ULM0 1364 aa20.25■□□□□ 0.83
DDX41-212ENST00000511040 TECPR2O15040 1411 aa20.24■□□□□ 0.83
DDX41-212ENST00000511040 DCCP43146 1447 aa20.24■□□□□ 0.83
DDX41-212ENST00000511040 KNDC1Q76NI1 1749 aa20.23■□□□□ 0.83
DDX41-212ENST00000511040 STAC3Q96MF2 364 aa20.23■□□□□ 0.83
DDX41-212ENST00000511040 L3MBTL2Q969R5 705 aa20.22■□□□□ 0.83
DDX41-212ENST00000511040 ADGRB1O14514 1584 aa20.21■□□□□ 0.83
DDX41-212ENST00000511040 MST1RQ04912 1400 aa20.21■□□□□ 0.83
DDX41-212ENST00000511040 SAFB2Q14151 953 aaKnown RBP eCLIP20.2■□□□□ 0.82
DDX41-212ENST00000511040 TRAK1Q9UPV9 953 aa20.19■□□□□ 0.82
DDX41-212ENST00000511040 BRINP3Q76B58 766 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms